data_8Q3U
#
_model_server_result.job_id            2GW0s0k-ePkWBfdAV2EWww 
_model_server_result.datetime_utc      '2024-11-26 09:39:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8q3u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    8Q3U 
#
_exptl.entry_id    8Q3U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8Q3U 
_cell.length_a            66.965 
_cell.length_b            89.422 
_cell.length_c            44.267 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8Q3U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 58 A CYS 54 1_555 A SG CYS 182 A CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc1 A NE2 HIS 98 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
metalc ? metalc2 A NE2 HIS 100 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc3 A ND1 HIS 123 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C N1 J8I . A J8I 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     8Q3U 
_atom_sites.fract_transf_matrix[1][1]    0.014933 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011183 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02259 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 301 263 ZN ZN . 
C 3 J8I A 1 302 1000 J8I I15 . 
D 4 GOL A 1 303 301 GOL GOL . 
E 4 GOL A 1 304 302 GOL GOL . 
F 5 HOH A 1 401 157 HOH HOH . 
F 5 HOH A 2 402 166 HOH HOH . 
F 5 HOH A 3 403 101 HOH HOH . 
F 5 HOH A 4 404 105 HOH HOH . 
F 5 HOH A 5 405 112 HOH HOH . 
F 5 HOH A 6 406 127 HOH HOH . 
F 5 HOH A 7 407 114 HOH HOH . 
F 5 HOH A 8 408 121 HOH HOH . 
F 5 HOH A 9 409 126 HOH HOH . 
F 5 HOH A 10 410 117 HOH HOH . 
F 5 HOH A 11 411 153 HOH HOH . 
F 5 HOH A 12 412 15 HOH HOH . 
F 5 HOH A 13 413 78 HOH HOH . 
F 5 HOH A 14 414 4 HOH HOH . 
F 5 HOH A 15 415 90 HOH HOH . 
F 5 HOH A 16 416 107 HOH HOH . 
F 5 HOH A 17 417 138 HOH HOH . 
F 5 HOH A 18 418 163 HOH HOH . 
F 5 HOH A 19 419 123 HOH HOH . 
F 5 HOH A 20 420 111 HOH HOH . 
F 5 HOH A 21 421 116 HOH HOH . 
F 5 HOH A 22 422 29 HOH HOH . 
F 5 HOH A 23 423 131 HOH HOH . 
F 5 HOH A 24 424 159 HOH HOH . 
F 5 HOH A 25 425 57 HOH HOH . 
F 5 HOH A 26 426 87 HOH HOH . 
F 5 HOH A 27 427 46 HOH HOH . 
F 5 HOH A 28 428 68 HOH HOH . 
F 5 HOH A 29 429 89 HOH HOH . 
F 5 HOH A 30 430 106 HOH HOH . 
F 5 HOH A 31 431 12 HOH HOH . 
F 5 HOH A 32 432 35 HOH HOH . 
F 5 HOH A 33 433 92 HOH HOH . 
F 5 HOH A 34 434 70 HOH HOH . 
F 5 HOH A 35 435 14 HOH HOH . 
F 5 HOH A 36 436 42 HOH HOH . 
F 5 HOH A 37 437 37 HOH HOH . 
F 5 HOH A 38 438 155 HOH HOH . 
F 5 HOH A 39 439 100 HOH HOH . 
F 5 HOH A 40 440 19 HOH HOH . 
F 5 HOH A 41 441 108 HOH HOH . 
F 5 HOH A 42 442 18 HOH HOH . 
F 5 HOH A 43 443 136 HOH HOH . 
F 5 HOH A 44 444 80 HOH HOH . 
F 5 HOH A 45 445 16 HOH HOH . 
F 5 HOH A 46 446 61 HOH HOH . 
F 5 HOH A 47 447 142 HOH HOH . 
F 5 HOH A 48 448 53 HOH HOH . 
F 5 HOH A 49 449 9 HOH HOH . 
F 5 HOH A 50 450 140 HOH HOH . 
F 5 HOH A 51 451 109 HOH HOH . 
F 5 HOH A 52 452 113 HOH HOH . 
F 5 HOH A 53 453 64 HOH HOH . 
F 5 HOH A 54 454 48 HOH HOH . 
F 5 HOH A 55 455 82 HOH HOH . 
F 5 HOH A 56 456 150 HOH HOH . 
F 5 HOH A 57 457 6 HOH HOH . 
F 5 HOH A 58 458 97 HOH HOH . 
F 5 HOH A 59 459 158 HOH HOH . 
F 5 HOH A 60 460 144 HOH HOH . 
F 5 HOH A 61 461 164 HOH HOH . 
F 5 HOH A 62 462 128 HOH HOH . 
F 5 HOH A 63 463 17 HOH HOH . 
F 5 HOH A 64 464 104 HOH HOH . 
F 5 HOH A 65 465 36 HOH HOH . 
F 5 HOH A 66 466 119 HOH HOH . 
F 5 HOH A 67 467 47 HOH HOH . 
F 5 HOH A 68 468 171 HOH HOH . 
F 5 HOH A 69 469 85 HOH HOH . 
F 5 HOH A 70 470 66 HOH HOH . 
F 5 HOH A 71 471 49 HOH HOH . 
F 5 HOH A 72 472 152 HOH HOH . 
F 5 HOH A 73 473 1 HOH HOH . 
F 5 HOH A 74 474 93 HOH HOH . 
F 5 HOH A 75 475 148 HOH HOH . 
F 5 HOH A 76 476 137 HOH HOH . 
F 5 HOH A 77 477 122 HOH HOH . 
F 5 HOH A 78 478 56 HOH HOH . 
F 5 HOH A 79 479 8 HOH HOH . 
F 5 HOH A 80 480 130 HOH HOH . 
F 5 HOH A 81 481 31 HOH HOH . 
F 5 HOH A 82 482 7 HOH HOH . 
F 5 HOH A 83 483 2 HOH HOH . 
F 5 HOH A 84 484 24 HOH HOH . 
F 5 HOH A 85 485 79 HOH HOH . 
F 5 HOH A 86 486 28 HOH HOH . 
F 5 HOH A 87 487 5 HOH HOH . 
F 5 HOH A 88 488 3 HOH HOH . 
F 5 HOH A 89 489 44 HOH HOH . 
F 5 HOH A 90 490 40 HOH HOH . 
F 5 HOH A 91 491 51 HOH HOH . 
F 5 HOH A 92 492 118 HOH HOH . 
F 5 HOH A 93 493 73 HOH HOH . 
F 5 HOH A 94 494 91 HOH HOH . 
F 5 HOH A 95 495 39 HOH HOH . 
F 5 HOH A 96 496 10 HOH HOH . 
F 5 HOH A 97 497 124 HOH HOH . 
F 5 HOH A 98 498 98 HOH HOH . 
F 5 HOH A 99 499 62 HOH HOH . 
F 5 HOH A 100 500 76 HOH HOH . 
F 5 HOH A 101 501 25 HOH HOH . 
F 5 HOH A 102 502 23 HOH HOH . 
F 5 HOH A 103 503 26 HOH HOH . 
F 5 HOH A 104 504 27 HOH HOH . 
F 5 HOH A 105 505 115 HOH HOH . 
F 5 HOH A 106 506 165 HOH HOH . 
F 5 HOH A 107 507 58 HOH HOH . 
F 5 HOH A 108 508 65 HOH HOH . 
F 5 HOH A 109 509 83 HOH HOH . 
F 5 HOH A 110 510 38 HOH HOH . 
F 5 HOH A 111 511 135 HOH HOH . 
F 5 HOH A 112 512 99 HOH HOH . 
F 5 HOH A 113 513 167 HOH HOH . 
F 5 HOH A 114 514 77 HOH HOH . 
F 5 HOH A 115 515 67 HOH HOH . 
F 5 HOH A 116 516 88 HOH HOH . 
F 5 HOH A 117 517 13 HOH HOH . 
F 5 HOH A 118 518 86 HOH HOH . 
F 5 HOH A 119 519 52 HOH HOH . 
F 5 HOH A 120 520 151 HOH HOH . 
F 5 HOH A 121 521 59 HOH HOH . 
F 5 HOH A 122 522 11 HOH HOH . 
F 5 HOH A 123 523 72 HOH HOH . 
F 5 HOH A 124 524 21 HOH HOH . 
F 5 HOH A 125 525 22 HOH HOH . 
F 5 HOH A 126 526 43 HOH HOH . 
F 5 HOH A 127 527 32 HOH HOH . 
F 5 HOH A 128 528 149 HOH HOH . 
F 5 HOH A 129 529 132 HOH HOH . 
F 5 HOH A 130 530 81 HOH HOH . 
F 5 HOH A 131 531 133 HOH HOH . 
F 5 HOH A 132 532 95 HOH HOH . 
F 5 HOH A 133 533 103 HOH HOH . 
F 5 HOH A 134 534 160 HOH HOH . 
F 5 HOH A 135 535 63 HOH HOH . 
F 5 HOH A 136 536 20 HOH HOH . 
F 5 HOH A 137 537 156 HOH HOH . 
F 5 HOH A 138 538 33 HOH HOH . 
F 5 HOH A 139 539 54 HOH HOH . 
F 5 HOH A 140 540 139 HOH HOH . 
F 5 HOH A 141 541 34 HOH HOH . 
F 5 HOH A 142 542 74 HOH HOH . 
F 5 HOH A 143 543 110 HOH HOH . 
F 5 HOH A 144 544 129 HOH HOH . 
F 5 HOH A 145 545 125 HOH HOH . 
F 5 HOH A 146 546 45 HOH HOH . 
F 5 HOH A 147 547 102 HOH HOH . 
F 5 HOH A 148 548 41 HOH HOH . 
F 5 HOH A 149 549 134 HOH HOH . 
F 5 HOH A 150 550 169 HOH HOH . 
F 5 HOH A 151 551 120 HOH HOH . 
F 5 HOH A 152 552 84 HOH HOH . 
F 5 HOH A 153 553 168 HOH HOH . 
F 5 HOH A 154 554 143 HOH HOH . 
F 5 HOH A 155 555 141 HOH HOH . 
F 5 HOH A 156 556 96 HOH HOH . 
F 5 HOH A 157 557 69 HOH HOH . 
F 5 HOH A 158 558 145 HOH HOH . 
F 5 HOH A 159 559 75 HOH HOH . 
F 5 HOH A 160 560 55 HOH HOH . 
F 5 HOH A 161 561 162 HOH HOH . 
F 5 HOH A 162 562 50 HOH HOH . 
F 5 HOH A 163 563 60 HOH HOH . 
F 5 HOH A 164 564 30 HOH HOH . 
F 5 HOH A 165 565 71 HOH HOH . 
F 5 HOH A 166 566 170 HOH HOH . 
F 5 HOH A 167 567 147 HOH HOH . 
F 5 HOH A 168 568 94 HOH HOH . 
F 5 HOH A 169 569 154 HOH HOH . 
F 5 HOH A 170 570 161 HOH HOH . 
F 5 HOH A 171 571 146 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 2.134 27.975 -9.841 1 21.84 ? C1 GOL 303 A 1 
HETATM 2 O O1 GOL . . . D 4 2.413 29.365 -9.966 1 24.48 ? O1 GOL 303 A 1 
HETATM 3 C C2 GOL . . . D 4 1.167 27.508 -10.906 1 22.58 ? C2 GOL 303 A 1 
HETATM 4 O O2 GOL . . . D 4 1.055 26.089 -10.818 1 22.74 ? O2 GOL 303 A 1 
HETATM 5 C C3 GOL . . . D 4 -0.228 28.087 -10.752 1 21.64 ? C3 GOL 303 A 1 
HETATM 6 O O3 GOL . . . D 4 -0.919 27.586 -9.636 1 18.07 ? O3 GOL 303 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           381 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           6 
#