data_8Q43 # _model_server_result.job_id OXyFSUg6wL33vZfVB7RLwg _model_server_result.datetime_utc '2024-10-11 03:15:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8q43 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 8Q43 # _exptl.entry_id 8Q43 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.76 _cell.angle_gamma 90 _cell.entry_id 8Q43 _cell.length_a 54.785 _cell.length_b 78.932 _cell.length_c 95.046 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Q43 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 345 A ASP 343 1_555 G MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc2 A O LEU 359 A LEU 357 1_555 G MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc3 G MN MN . A MN 502 1_555 I O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc4 G MN MN . A MN 502 1_555 I O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc5 G MN MN . A MN 502 1_555 I O HOH . A HOH 649 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc6 G MN MN . A MN 502 1_555 K O HOH . C HOH 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc7 B OD2 ASP 345 B ASP 343 1_555 H MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc8 B O LEU 359 B LEU 357 1_555 H MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc9 H MN MN . B MN 501 1_555 J O HOH . B HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc10 H MN MN . B MN 501 1_555 J O HOH . B HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc11 H MN MN . B MN 501 1_555 L O HOH . D HOH 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc12 H MN MN . B MN 501 1_555 L O HOH . D HOH 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8Q43 _atom_sites.fract_transf_matrix[1][1] 0.018253 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00152 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012669 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010558 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 MN A 1 501 2 MN MN . G 4 MN A 1 502 1 MN MN . H 4 MN B 1 501 1 MN MN . I 5 HOH A 1 601 82 HOH HOH . I 5 HOH A 2 602 93 HOH HOH . I 5 HOH A 3 603 138 HOH HOH . I 5 HOH A 4 604 56 HOH HOH . I 5 HOH A 5 605 32 HOH HOH . I 5 HOH A 6 606 35 HOH HOH . I 5 HOH A 7 607 58 HOH HOH . I 5 HOH A 8 608 2 HOH HOH . I 5 HOH A 9 609 94 HOH HOH . I 5 HOH A 10 610 182 HOH HOH . I 5 HOH A 11 611 160 HOH HOH . I 5 HOH A 12 612 85 HOH HOH . I 5 HOH A 13 613 80 HOH HOH . I 5 HOH A 14 614 123 HOH HOH . I 5 HOH A 15 615 181 HOH HOH . I 5 HOH A 16 616 113 HOH HOH . I 5 HOH A 17 617 3 HOH HOH . I 5 HOH A 18 618 74 HOH HOH . I 5 HOH A 19 619 189 HOH HOH . I 5 HOH A 20 620 30 HOH HOH . I 5 HOH A 21 621 137 HOH HOH . I 5 HOH A 22 622 55 HOH HOH . I 5 HOH A 23 623 50 HOH HOH . I 5 HOH A 24 624 129 HOH HOH . I 5 HOH A 25 625 106 HOH HOH . I 5 HOH A 26 626 15 HOH HOH . I 5 HOH A 27 627 154 HOH HOH . I 5 HOH A 28 628 21 HOH HOH . I 5 HOH A 29 629 49 HOH HOH . I 5 HOH A 30 630 173 HOH HOH . I 5 HOH A 31 631 164 HOH HOH . I 5 HOH A 32 632 179 HOH HOH . I 5 HOH A 33 633 22 HOH HOH . I 5 HOH A 34 634 149 HOH HOH . I 5 HOH A 35 635 186 HOH HOH . I 5 HOH A 36 636 75 HOH HOH . I 5 HOH A 37 637 77 HOH HOH . I 5 HOH A 38 638 28 HOH HOH . I 5 HOH A 39 639 73 HOH HOH . I 5 HOH A 40 640 90 HOH HOH . I 5 HOH A 41 641 87 HOH HOH . I 5 HOH A 42 642 108 HOH HOH . I 5 HOH A 43 643 44 HOH HOH . I 5 HOH A 44 644 39 HOH HOH . I 5 HOH A 45 645 165 HOH HOH . I 5 HOH A 46 646 92 HOH HOH . I 5 HOH A 47 647 78 HOH HOH . I 5 HOH A 48 648 9 HOH HOH . I 5 HOH A 49 649 4 HOH HOH . I 5 HOH A 50 650 64 HOH HOH . I 5 HOH A 51 651 43 HOH HOH . I 5 HOH A 52 652 46 HOH HOH . I 5 HOH A 53 653 163 HOH HOH . I 5 HOH A 54 654 88 HOH HOH . I 5 HOH A 55 655 102 HOH HOH . I 5 HOH A 56 656 27 HOH HOH . I 5 HOH A 57 657 81 HOH HOH . I 5 HOH A 58 658 110 HOH HOH . I 5 HOH A 59 659 162 HOH HOH . I 5 HOH A 60 660 151 HOH HOH . I 5 HOH A 61 661 131 HOH HOH . I 5 HOH A 62 662 101 HOH HOH . I 5 HOH A 63 663 132 HOH HOH . I 5 HOH A 64 664 83 HOH HOH . I 5 HOH A 65 665 100 HOH HOH . I 5 HOH A 66 666 143 HOH HOH . I 5 HOH A 67 667 111 HOH HOH . I 5 HOH A 68 668 79 HOH HOH . I 5 HOH A 69 669 127 HOH HOH . I 5 HOH A 70 670 183 HOH HOH . I 5 HOH A 71 671 69 HOH HOH . I 5 HOH A 72 672 171 HOH HOH . I 5 HOH A 73 673 99 HOH HOH . I 5 HOH A 74 674 157 HOH HOH . I 5 HOH A 75 675 133 HOH HOH . I 5 HOH A 76 676 159 HOH HOH . J 5 HOH B 1 601 117 HOH HOH . J 5 HOH B 2 602 41 HOH HOH . J 5 HOH B 3 603 136 HOH HOH . J 5 HOH B 4 604 66 HOH HOH . J 5 HOH B 5 605 96 HOH HOH . J 5 HOH B 6 606 135 HOH HOH . J 5 HOH B 7 607 174 HOH HOH . J 5 HOH B 8 608 95 HOH HOH . J 5 HOH B 9 609 42 HOH HOH . J 5 HOH B 10 610 8 HOH HOH . J 5 HOH B 11 611 36 HOH HOH . J 5 HOH B 12 612 139 HOH HOH . J 5 HOH B 13 613 10 HOH HOH . J 5 HOH B 14 614 116 HOH HOH . J 5 HOH B 15 615 161 HOH HOH . J 5 HOH B 16 616 180 HOH HOH . J 5 HOH B 17 617 16 HOH HOH . J 5 HOH B 18 618 158 HOH HOH . J 5 HOH B 19 619 57 HOH HOH . J 5 HOH B 20 620 6 HOH HOH . J 5 HOH B 21 621 13 HOH HOH . J 5 HOH B 22 622 18 HOH HOH . J 5 HOH B 23 623 147 HOH HOH . J 5 HOH B 24 624 40 HOH HOH . J 5 HOH B 25 625 48 HOH HOH . J 5 HOH B 26 626 62 HOH HOH . J 5 HOH B 27 627 17 HOH HOH . J 5 HOH B 28 628 185 HOH HOH . J 5 HOH B 29 629 29 HOH HOH . J 5 HOH B 30 630 107 HOH HOH . J 5 HOH B 31 631 14 HOH HOH . J 5 HOH B 32 632 125 HOH HOH . J 5 HOH B 33 633 184 HOH HOH . J 5 HOH B 34 634 34 HOH HOH . J 5 HOH B 35 635 20 HOH HOH . J 5 HOH B 36 636 130 HOH HOH . J 5 HOH B 37 637 166 HOH HOH . J 5 HOH B 38 638 54 HOH HOH . J 5 HOH B 39 639 51 HOH HOH . J 5 HOH B 40 640 178 HOH HOH . J 5 HOH B 41 641 60 HOH HOH . J 5 HOH B 42 642 68 HOH HOH . J 5 HOH B 43 643 67 HOH HOH . J 5 HOH B 44 644 76 HOH HOH . J 5 HOH B 45 645 61 HOH HOH . J 5 HOH B 46 646 37 HOH HOH . J 5 HOH B 47 647 12 HOH HOH . J 5 HOH B 48 648 109 HOH HOH . J 5 HOH B 49 649 150 HOH HOH . J 5 HOH B 50 650 26 HOH HOH . J 5 HOH B 51 651 33 HOH HOH . J 5 HOH B 52 652 11 HOH HOH . J 5 HOH B 53 653 19 HOH HOH . J 5 HOH B 54 654 152 HOH HOH . J 5 HOH B 55 655 25 HOH HOH . J 5 HOH B 56 656 45 HOH HOH . J 5 HOH B 57 657 71 HOH HOH . J 5 HOH B 58 658 128 HOH HOH . J 5 HOH B 59 659 70 HOH HOH . J 5 HOH B 60 660 84 HOH HOH . J 5 HOH B 61 661 91 HOH HOH . J 5 HOH B 62 662 121 HOH HOH . J 5 HOH B 63 663 47 HOH HOH . J 5 HOH B 64 664 176 HOH HOH . J 5 HOH B 65 665 124 HOH HOH . J 5 HOH B 66 666 187 HOH HOH . J 5 HOH B 67 667 190 HOH HOH . J 5 HOH B 68 668 52 HOH HOH . J 5 HOH B 69 669 170 HOH HOH . J 5 HOH B 70 670 98 HOH HOH . J 5 HOH B 71 671 141 HOH HOH . K 5 HOH C 1 101 1 HOH HOH . K 5 HOH C 2 102 169 HOH HOH . L 5 HOH D 1 101 126 HOH HOH . L 5 HOH D 2 102 7 HOH HOH . L 5 HOH D 3 103 5 HOH HOH . L 5 HOH D 4 104 175 HOH HOH . M 5 HOH X 1 101 86 HOH HOH . M 5 HOH X 2 102 31 HOH HOH . M 5 HOH X 3 103 65 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 3.73 _atom_site.Cartn_y 7.592 _atom_site.Cartn_z 12.651 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #