data_8Q4S
#
_model_server_result.job_id            OE5tROv22Is3yVpUtpceew 
_model_server_result.datetime_utc      '2025-06-28 22:54:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8q4s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    8Q4S 
#
_exptl.entry_id    8Q4S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8Q4S 
_cell.length_a            144.08 
_cell.length_b            144.08 
_cell.length_c            144.08 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8Q4S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        199 
_symmetry.space_group_name_Hall    'I 2b 2c 3' 
_symmetry.space_group_name_H-M     'I 21 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 98 A ASP 86 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? 
metalc ? metalc2 A O ASP 100 A ASP 88 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc3 A OD1 ASP 255 A ASP 243 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
metalc ? metalc4 B O1 E7P . A E7P 301 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc5 E MG MG . A MG 304 1_555 F O HOH . A HOH 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc6 E MG MG . A MG 304 1_555 F O HOH . A HOH 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 149 n n 
C1 C2 GOL sing 150 n n 
C1 H11 GOL sing 151 n n 
C1 H12 GOL sing 152 n n 
O1 HO1 GOL sing 153 n n 
C2 O2 GOL sing 154 n n 
C2 C3 GOL sing 155 n n 
C2 H2 GOL sing 156 n n 
O2 HO2 GOL sing 157 n n 
C3 O3 GOL sing 158 n n 
C3 H31 GOL sing 159 n n 
C3 H32 GOL sing 160 n n 
O3 HO3 GOL sing 161 n n 
#
_atom_sites.entry_id                     8Q4S 
_atom_sites.fract_transf_matrix[1][1]    0.006941 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006941 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006941 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 E7P A 1 301 301 E7P AP4 . 
C 3 GOL A 1 302 2 GOL GOL . 
D 3 GOL A 1 303 3 GOL GOL . 
E 4 MG A 1 304 1 MG MG . 
F 5 HOH A 1 401 192 HOH HOH . 
F 5 HOH A 2 402 104 HOH HOH . 
F 5 HOH A 3 403 98 HOH HOH . 
F 5 HOH A 4 404 94 HOH HOH . 
F 5 HOH A 5 405 81 HOH HOH . 
F 5 HOH A 6 406 71 HOH HOH . 
F 5 HOH A 7 407 118 HOH HOH . 
F 5 HOH A 8 408 159 HOH HOH . 
F 5 HOH A 9 409 155 HOH HOH . 
F 5 HOH A 10 410 187 HOH HOH . 
F 5 HOH A 11 411 86 HOH HOH . 
F 5 HOH A 12 412 89 HOH HOH . 
F 5 HOH A 13 413 157 HOH HOH . 
F 5 HOH A 14 414 96 HOH HOH . 
F 5 HOH A 15 415 16 HOH HOH . 
F 5 HOH A 16 416 5 HOH HOH . 
F 5 HOH A 17 417 21 HOH HOH . 
F 5 HOH A 18 418 45 HOH HOH . 
F 5 HOH A 19 419 133 HOH HOH . 
F 5 HOH A 20 420 76 HOH HOH . 
F 5 HOH A 21 421 37 HOH HOH . 
F 5 HOH A 22 422 69 HOH HOH . 
F 5 HOH A 23 423 35 HOH HOH . 
F 5 HOH A 24 424 7 HOH HOH . 
F 5 HOH A 25 425 17 HOH HOH . 
F 5 HOH A 26 426 31 HOH HOH . 
F 5 HOH A 27 427 128 HOH HOH . 
F 5 HOH A 28 428 64 HOH HOH . 
F 5 HOH A 29 429 57 HOH HOH . 
F 5 HOH A 30 430 12 HOH HOH . 
F 5 HOH A 31 431 26 HOH HOH . 
F 5 HOH A 32 432 102 HOH HOH . 
F 5 HOH A 33 433 171 HOH HOH . 
F 5 HOH A 34 434 42 HOH HOH . 
F 5 HOH A 35 435 9 HOH HOH . 
F 5 HOH A 36 436 3 HOH HOH . 
F 5 HOH A 37 437 11 HOH HOH . 
F 5 HOH A 38 438 178 HOH HOH . 
F 5 HOH A 39 439 78 HOH HOH . 
F 5 HOH A 40 440 167 HOH HOH . 
F 5 HOH A 41 441 8 HOH HOH . 
F 5 HOH A 42 442 48 HOH HOH . 
F 5 HOH A 43 443 52 HOH HOH . 
F 5 HOH A 44 444 10 HOH HOH . 
F 5 HOH A 45 445 18 HOH HOH . 
F 5 HOH A 46 446 50 HOH HOH . 
F 5 HOH A 47 447 6 HOH HOH . 
F 5 HOH A 48 448 74 HOH HOH . 
F 5 HOH A 49 449 39 HOH HOH . 
F 5 HOH A 50 450 25 HOH HOH . 
F 5 HOH A 51 451 154 HOH HOH . 
F 5 HOH A 52 452 130 HOH HOH . 
F 5 HOH A 53 453 46 HOH HOH . 
F 5 HOH A 54 454 14 HOH HOH . 
F 5 HOH A 55 455 109 HOH HOH . 
F 5 HOH A 56 456 13 HOH HOH . 
F 5 HOH A 57 457 51 HOH HOH . 
F 5 HOH A 58 458 80 HOH HOH . 
F 5 HOH A 59 459 149 HOH HOH . 
F 5 HOH A 60 460 15 HOH HOH . 
F 5 HOH A 61 461 124 HOH HOH . 
F 5 HOH A 62 462 146 HOH HOH . 
F 5 HOH A 63 463 55 HOH HOH . 
F 5 HOH A 64 464 191 HOH HOH . 
F 5 HOH A 65 465 112 HOH HOH . 
F 5 HOH A 66 466 20 HOH HOH . 
F 5 HOH A 67 467 101 HOH HOH . 
F 5 HOH A 68 468 24 HOH HOH . 
F 5 HOH A 69 469 205 HOH HOH . 
F 5 HOH A 70 470 106 HOH HOH . 
F 5 HOH A 71 471 70 HOH HOH . 
F 5 HOH A 72 472 99 HOH HOH . 
F 5 HOH A 73 473 66 HOH HOH . 
F 5 HOH A 74 474 92 HOH HOH . 
F 5 HOH A 75 475 4 HOH HOH . 
F 5 HOH A 76 476 62 HOH HOH . 
F 5 HOH A 77 477 204 HOH HOH . 
F 5 HOH A 78 478 63 HOH HOH . 
F 5 HOH A 79 479 41 HOH HOH . 
F 5 HOH A 80 480 144 HOH HOH . 
F 5 HOH A 81 481 43 HOH HOH . 
F 5 HOH A 82 482 180 HOH HOH . 
F 5 HOH A 83 483 87 HOH HOH . 
F 5 HOH A 84 484 53 HOH HOH . 
F 5 HOH A 85 485 23 HOH HOH . 
F 5 HOH A 86 486 151 HOH HOH . 
F 5 HOH A 87 487 122 HOH HOH . 
F 5 HOH A 88 488 44 HOH HOH . 
F 5 HOH A 89 489 206 HOH HOH . 
F 5 HOH A 90 490 115 HOH HOH . 
F 5 HOH A 91 491 30 HOH HOH . 
F 5 HOH A 92 492 135 HOH HOH . 
F 5 HOH A 93 493 47 HOH HOH . 
F 5 HOH A 94 494 61 HOH HOH . 
F 5 HOH A 95 495 111 HOH HOH . 
F 5 HOH A 96 496 156 HOH HOH . 
F 5 HOH A 97 497 22 HOH HOH . 
F 5 HOH A 98 498 114 HOH HOH . 
F 5 HOH A 99 499 27 HOH HOH . 
F 5 HOH A 100 500 29 HOH HOH . 
F 5 HOH A 101 501 136 HOH HOH . 
F 5 HOH A 102 502 83 HOH HOH . 
F 5 HOH A 103 503 119 HOH HOH . 
F 5 HOH A 104 504 152 HOH HOH . 
F 5 HOH A 105 505 59 HOH HOH . 
F 5 HOH A 106 506 127 HOH HOH . 
F 5 HOH A 107 507 147 HOH HOH . 
F 5 HOH A 108 508 176 HOH HOH . 
F 5 HOH A 109 509 54 HOH HOH . 
F 5 HOH A 110 510 19 HOH HOH . 
F 5 HOH A 111 511 73 HOH HOH . 
F 5 HOH A 112 512 188 HOH HOH . 
F 5 HOH A 113 513 34 HOH HOH . 
F 5 HOH A 114 514 126 HOH HOH . 
F 5 HOH A 115 515 33 HOH HOH . 
F 5 HOH A 116 516 129 HOH HOH . 
F 5 HOH A 117 517 77 HOH HOH . 
F 5 HOH A 118 518 158 HOH HOH . 
F 5 HOH A 119 519 49 HOH HOH . 
F 5 HOH A 120 520 56 HOH HOH . 
F 5 HOH A 121 521 75 HOH HOH . 
F 5 HOH A 122 522 65 HOH HOH . 
F 5 HOH A 123 523 169 HOH HOH . 
F 5 HOH A 124 524 143 HOH HOH . 
F 5 HOH A 125 525 123 HOH HOH . 
F 5 HOH A 126 526 165 HOH HOH . 
F 5 HOH A 127 527 100 HOH HOH . 
F 5 HOH A 128 528 172 HOH HOH . 
F 5 HOH A 129 529 137 HOH HOH . 
F 5 HOH A 130 530 168 HOH HOH . 
F 5 HOH A 131 531 28 HOH HOH . 
F 5 HOH A 132 532 68 HOH HOH . 
F 5 HOH A 133 533 36 HOH HOH . 
F 5 HOH A 134 534 38 HOH HOH . 
F 5 HOH A 135 535 88 HOH HOH . 
F 5 HOH A 136 536 207 HOH HOH . 
F 5 HOH A 137 537 79 HOH HOH . 
F 5 HOH A 138 538 125 HOH HOH . 
F 5 HOH A 139 539 2 HOH HOH . 
F 5 HOH A 140 540 200 HOH HOH . 
F 5 HOH A 141 541 190 HOH HOH . 
F 5 HOH A 142 542 85 HOH HOH . 
F 5 HOH A 143 543 174 HOH HOH . 
F 5 HOH A 144 544 148 HOH HOH . 
F 5 HOH A 145 545 140 HOH HOH . 
F 5 HOH A 146 546 186 HOH HOH . 
F 5 HOH A 147 547 84 HOH HOH . 
F 5 HOH A 148 548 197 HOH HOH . 
F 5 HOH A 149 549 32 HOH HOH . 
F 5 HOH A 150 550 131 HOH HOH . 
F 5 HOH A 151 551 199 HOH HOH . 
F 5 HOH A 152 552 141 HOH HOH . 
F 5 HOH A 153 553 194 HOH HOH . 
F 5 HOH A 154 554 134 HOH HOH . 
F 5 HOH A 155 555 181 HOH HOH . 
F 5 HOH A 156 556 208 HOH HOH . 
F 5 HOH A 157 557 202 HOH HOH . 
F 5 HOH A 158 558 95 HOH HOH . 
F 5 HOH A 159 559 67 HOH HOH . 
F 5 HOH A 160 560 139 HOH HOH . 
F 5 HOH A 161 561 198 HOH HOH . 
F 5 HOH A 162 562 40 HOH HOH . 
F 5 HOH A 163 563 97 HOH HOH . 
F 5 HOH A 164 564 166 HOH HOH . 
F 5 HOH A 165 565 170 HOH HOH . 
F 5 HOH A 166 566 110 HOH HOH . 
F 5 HOH A 167 567 82 HOH HOH . 
F 5 HOH A 168 568 91 HOH HOH . 
F 5 HOH A 169 569 161 HOH HOH . 
F 5 HOH A 170 570 160 HOH HOH . 
F 5 HOH A 171 571 121 HOH HOH . 
F 5 HOH A 172 572 138 HOH HOH . 
F 5 HOH A 173 573 185 HOH HOH . 
F 5 HOH A 174 574 142 HOH HOH . 
F 5 HOH A 175 575 60 HOH HOH . 
F 5 HOH A 176 576 145 HOH HOH . 
F 5 HOH A 177 577 196 HOH HOH . 
F 5 HOH A 178 578 193 HOH HOH . 
F 5 HOH A 179 579 72 HOH HOH . 
F 5 HOH A 180 580 58 HOH HOH . 
F 5 HOH A 181 581 90 HOH HOH . 
F 5 HOH A 182 582 103 HOH HOH . 
F 5 HOH A 183 583 107 HOH HOH . 
F 5 HOH A 184 584 116 HOH HOH . 
F 5 HOH A 185 585 184 HOH HOH . 
F 5 HOH A 186 586 117 HOH HOH . 
F 5 HOH A 187 587 203 HOH HOH . 
F 5 HOH A 188 588 175 HOH HOH . 
F 5 HOH A 189 589 201 HOH HOH . 
F 5 HOH A 190 590 173 HOH HOH . 
F 5 HOH A 191 591 108 HOH HOH . 
F 5 HOH A 192 592 113 HOH HOH . 
F 5 HOH A 193 593 105 HOH HOH . 
F 5 HOH A 194 594 93 HOH HOH . 
F 5 HOH A 195 595 164 HOH HOH . 
F 5 HOH A 196 596 132 HOH HOH . 
F 5 HOH A 197 597 162 HOH HOH . 
F 5 HOH A 198 598 195 HOH HOH . 
F 5 HOH A 199 599 120 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 -19.804 -10.651 -3.641 0.95 59.75 ? C1 GOL 302 A 1 
HETATM 2 O O1 GOL . . . C 3 -20.815 -10.248 -4.52 0.95 73.27 ? O1 GOL 302 A 1 
HETATM 3 C C2 GOL . . . C 3 -19.402 -12.073 -4.014 0.95 57.43 ? C2 GOL 302 A 1 
HETATM 4 O O2 GOL . . . C 3 -18.784 -12.005 -5.267 0.95 72.39 ? O2 GOL 302 A 1 
HETATM 5 C C3 GOL . . . C 3 -20.607 -13.003 -4.138 0.95 72.43 ? C3 GOL 302 A 1 
HETATM 6 O O3 GOL . . . C 3 -20.166 -14.216 -4.683 0.95 78.4 ? O3 GOL 302 A 1 
#
_model_server_stats.io_time_ms              90 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           537 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#