data_8Q8I # _model_server_result.job_id DwgcwnN2czB1J61IMgX3SQ _model_server_result.datetime_utc '2024-11-14 05:43:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8q8i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":318}' # _entry.id 8Q8I # _exptl.entry_id 8Q8I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.32 _cell.angle_gamma 90 _cell.entry_id 8Q8I _cell.length_a 126.579 _cell.length_b 50.456 _cell.length_c 51.543 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Q8I _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id S _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 75 A ASP 73 1_555 F MG MG . A MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc2 A OD1 ASN 100 A ASN 98 1_555 G MG MG . A MG 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc3 A OG SER 108 A SER 106 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? metalc ? metalc4 A O ILE 227 A ILE 225 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc5 A OD1 ASP 242 A ASP 240 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? metalc ? metalc6 A O GLU 244 A GLU 242 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.105 ? metalc ? metalc7 A O ILE 258 A ILE 256 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.864 ? metalc ? metalc8 A O LYS 261 A LYS 259 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc9 D CA CA . A CA 303 1_555 T O22 BCN . A BCN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc10 D CA CA . A CA 303 1_555 T O6 BCN . A BCN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc11 D CA CA . A CA 303 1_555 T O4 BCN . A BCN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc12 I MG MG . A MG 308 1_555 U O HOH . A HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 372 n n C1 C2 PEG sing 373 n n C1 H11 PEG sing 374 n n C1 H12 PEG sing 375 n n O1 HO1 PEG sing 376 n n C2 O2 PEG sing 377 n n C2 H21 PEG sing 378 n n C2 H22 PEG sing 379 n n O2 C3 PEG sing 380 n n C3 C4 PEG sing 381 n n C3 H31 PEG sing 382 n n C3 H32 PEG sing 383 n n C4 O4 PEG sing 384 n n C4 H41 PEG sing 385 n n C4 H42 PEG sing 386 n n O4 HO4 PEG sing 387 n n # _atom_sites.entry_id 8Q8I _atom_sites.fract_transf_matrix[1][1] 0.0079 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000876 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019819 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 1 GOL GOL . C 3 CA A 1 302 3 CA CA . D 3 CA A 1 303 4 CA CA . E 4 MG A 1 304 1 MG MG . F 4 MG A 1 305 2 MG MG . G 4 MG A 1 306 3 MG MG . H 4 MG A 1 307 4 MG MG . I 4 MG A 1 308 5 MG MG . J 5 O5R A 1 309 1 O5R GFR . K 6 EDO A 1 310 1 EDO EDO . L 6 EDO A 1 311 2 EDO EDO . M 6 EDO A 1 312 3 EDO EDO . N 6 EDO A 1 313 4 EDO EDO . O 6 EDO A 1 314 5 EDO EDO . P 6 EDO A 1 315 6 EDO EDO . Q 6 EDO A 1 316 7 EDO EDO . R 6 EDO A 1 317 8 EDO EDO . S 7 PEG A 1 318 1 PEG PEG . T 8 BCN A 1 319 1 BCN BCN . U 9 HOH A 1 401 17 HOH HOH . U 9 HOH A 2 402 13 HOH HOH . U 9 HOH A 3 403 49 HOH HOH . U 9 HOH A 4 404 15 HOH HOH . U 9 HOH A 5 405 52 HOH HOH . U 9 HOH A 6 406 53 HOH HOH . U 9 HOH A 7 407 42 HOH HOH . U 9 HOH A 8 408 10 HOH HOH . U 9 HOH A 9 409 39 HOH HOH . U 9 HOH A 10 410 35 HOH HOH . U 9 HOH A 11 411 14 HOH HOH . U 9 HOH A 12 412 2 HOH HOH . U 9 HOH A 13 413 12 HOH HOH . U 9 HOH A 14 414 78 HOH HOH . U 9 HOH A 15 415 50 HOH HOH . U 9 HOH A 16 416 26 HOH HOH . U 9 HOH A 17 417 29 HOH HOH . U 9 HOH A 18 418 43 HOH HOH . U 9 HOH A 19 419 57 HOH HOH . U 9 HOH A 20 420 40 HOH HOH . U 9 HOH A 21 421 86 HOH HOH . U 9 HOH A 22 422 6 HOH HOH . U 9 HOH A 23 423 34 HOH HOH . U 9 HOH A 24 424 45 HOH HOH . U 9 HOH A 25 425 88 HOH HOH . U 9 HOH A 26 426 11 HOH HOH . U 9 HOH A 27 427 24 HOH HOH . U 9 HOH A 28 428 9 HOH HOH . U 9 HOH A 29 429 25 HOH HOH . U 9 HOH A 30 430 54 HOH HOH . U 9 HOH A 31 431 38 HOH HOH . U 9 HOH A 32 432 1 HOH HOH . U 9 HOH A 33 433 63 HOH HOH . U 9 HOH A 34 434 3 HOH HOH . U 9 HOH A 35 435 37 HOH HOH . U 9 HOH A 36 436 31 HOH HOH . U 9 HOH A 37 437 4 HOH HOH . U 9 HOH A 38 438 67 HOH HOH . U 9 HOH A 39 439 51 HOH HOH . U 9 HOH A 40 440 47 HOH HOH . U 9 HOH A 41 441 36 HOH HOH . U 9 HOH A 42 442 56 HOH HOH . U 9 HOH A 43 443 32 HOH HOH . U 9 HOH A 44 444 44 HOH HOH . U 9 HOH A 45 445 62 HOH HOH . U 9 HOH A 46 446 80 HOH HOH . U 9 HOH A 47 447 23 HOH HOH . U 9 HOH A 48 448 70 HOH HOH . U 9 HOH A 49 449 55 HOH HOH . U 9 HOH A 50 450 89 HOH HOH . U 9 HOH A 51 451 30 HOH HOH . U 9 HOH A 52 452 79 HOH HOH . U 9 HOH A 53 453 65 HOH HOH . U 9 HOH A 54 454 27 HOH HOH . U 9 HOH A 55 455 33 HOH HOH . U 9 HOH A 56 456 28 HOH HOH . U 9 HOH A 57 457 48 HOH HOH . U 9 HOH A 58 458 71 HOH HOH . U 9 HOH A 59 459 46 HOH HOH . U 9 HOH A 60 460 18 HOH HOH . U 9 HOH A 61 461 16 HOH HOH . U 9 HOH A 62 462 59 HOH HOH . U 9 HOH A 63 463 83 HOH HOH . U 9 HOH A 64 464 41 HOH HOH . U 9 HOH A 65 465 8 HOH HOH . U 9 HOH A 66 466 21 HOH HOH . U 9 HOH A 67 467 19 HOH HOH . U 9 HOH A 68 468 7 HOH HOH . U 9 HOH A 69 469 91 HOH HOH . U 9 HOH A 70 470 20 HOH HOH . U 9 HOH A 71 471 61 HOH HOH . U 9 HOH A 72 472 73 HOH HOH . U 9 HOH A 73 473 87 HOH HOH . U 9 HOH A 74 474 5 HOH HOH . U 9 HOH A 75 475 94 HOH HOH . U 9 HOH A 76 476 58 HOH HOH . U 9 HOH A 77 477 72 HOH HOH . U 9 HOH A 78 478 84 HOH HOH . U 9 HOH A 79 479 22 HOH HOH . U 9 HOH A 80 480 95 HOH HOH . U 9 HOH A 81 481 90 HOH HOH . U 9 HOH A 82 482 60 HOH HOH . U 9 HOH A 83 483 92 HOH HOH . U 9 HOH A 84 484 85 HOH HOH . U 9 HOH A 85 485 76 HOH HOH . U 9 HOH A 86 486 75 HOH HOH . U 9 HOH A 87 487 82 HOH HOH . U 9 HOH A 88 488 68 HOH HOH . U 9 HOH A 89 489 66 HOH HOH . U 9 HOH A 90 490 93 HOH HOH . U 9 HOH A 91 491 81 HOH HOH . U 9 HOH A 92 492 64 HOH HOH . U 9 HOH A 93 493 74 HOH HOH . U 9 HOH A 94 494 77 HOH HOH . U 9 HOH A 95 495 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . S 7 1.779 -20.047 0.72 1 22.35 ? C1 PEG 318 A 1 HETATM 2 O O1 PEG . . . S 7 2.046 -19.947 2.093 1 31.21 ? O1 PEG 318 A 1 HETATM 3 C C2 PEG . . . S 7 2.675 -21.112 0.089 1 14.31 ? C2 PEG 318 A 1 HETATM 4 O O2 PEG . . . S 7 3.971 -20.601 -0.058 1 22.72 ? O2 PEG 318 A 1 HETATM 5 C C3 PEG . . . S 7 5.003 -21.498 0.254 1 20.05 ? C3 PEG 318 A 1 HETATM 6 C C4 PEG . . . S 7 5.28 -22.43 -0.923 1 18.49 ? C4 PEG 318 A 1 HETATM 7 O O4 PEG . . . S 7 6.15 -23.451 -0.514 1 15.56 ? O4 PEG 318 A 1 HETATM 8 H H11 PEG . . . S 7 0.85 -20.291 0.591 1 27.29 ? H11 PEG 318 A 1 HETATM 9 H H12 PEG . . . S 7 1.951 -19.191 0.296 1 27.29 ? H12 PEG 318 A 1 HETATM 10 H HO1 PEG . . . S 7 1.32 -19.808 2.51 1 37.92 ? HO1 PEG 318 A 1 HETATM 11 H H21 PEG . . . S 7 2.699 -21.895 0.661 1 17.64 ? H21 PEG 318 A 1 HETATM 12 H H22 PEG . . . S 7 2.323 -21.357 -0.781 1 17.64 ? H22 PEG 318 A 1 HETATM 13 H H31 PEG . . . S 7 5.808 -20.998 0.462 1 24.53 ? H31 PEG 318 A 1 HETATM 14 H H32 PEG . . . S 7 4.743 -22.026 1.025 1 24.53 ? H32 PEG 318 A 1 HETATM 15 H H41 PEG . . . S 7 4.447 -22.82 -1.231 1 22.66 ? H41 PEG 318 A 1 HETATM 16 H H42 PEG . . . S 7 5.688 -21.927 -1.645 1 22.66 ? H42 PEG 318 A 1 HETATM 17 H HO4 PEG . . . S 7 6.398 -23.9 -1.192 1 19.15 ? HO4 PEG 318 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #