data_8Q9S
#
_model_server_result.job_id            Fy0fDpJzbxvbOzIT9NqTpw 
_model_server_result.datetime_utc      '2024-11-24 19:04:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8q9s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    8Q9S 
#
_exptl.entry_id    8Q9S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         66.83 
_cell.angle_beta          89.43 
_cell.angle_gamma         88.93 
_cell.entry_id            8Q9S 
_cell.length_a            46.217 
_cell.length_b            47.682 
_cell.length_c            50.562 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8Q9S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8Q9S 
_atom_sites.fract_transf_matrix[1][1]    0.021637 
_atom_sites.fract_transf_matrix[1][2]    -0.000404 
_atom_sites.fract_transf_matrix[1][3]    -0.000061 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020976 
_atom_sites.fract_transf_matrix[2][3]    -0.008975 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021513 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 QBE A 1 401 401 QBE SGC . 
C 3 EDO A 1 402 402 EDO EDO . 
D 3 EDO A 1 403 403 EDO EDO . 
E 4 HOH A 1 501 197 HOH HOH . 
E 4 HOH A 2 502 143 HOH HOH . 
E 4 HOH A 3 503 35 HOH HOH . 
E 4 HOH A 4 504 114 HOH HOH . 
E 4 HOH A 5 505 184 HOH HOH . 
E 4 HOH A 6 506 58 HOH HOH . 
E 4 HOH A 7 507 252 HOH HOH . 
E 4 HOH A 8 508 248 HOH HOH . 
E 4 HOH A 9 509 98 HOH HOH . 
E 4 HOH A 10 510 161 HOH HOH . 
E 4 HOH A 11 511 48 HOH HOH . 
E 4 HOH A 12 512 64 HOH HOH . 
E 4 HOH A 13 513 159 HOH HOH . 
E 4 HOH A 14 514 57 HOH HOH . 
E 4 HOH A 15 515 157 HOH HOH . 
E 4 HOH A 16 516 194 HOH HOH . 
E 4 HOH A 17 517 134 HOH HOH . 
E 4 HOH A 18 518 53 HOH HOH . 
E 4 HOH A 19 519 69 HOH HOH . 
E 4 HOH A 20 520 191 HOH HOH . 
E 4 HOH A 21 521 71 HOH HOH . 
E 4 HOH A 22 522 146 HOH HOH . 
E 4 HOH A 23 523 45 HOH HOH . 
E 4 HOH A 24 524 251 HOH HOH . 
E 4 HOH A 25 525 10 HOH HOH . 
E 4 HOH A 26 526 96 HOH HOH . 
E 4 HOH A 27 527 218 HOH HOH . 
E 4 HOH A 28 528 115 HOH HOH . 
E 4 HOH A 29 529 29 HOH HOH . 
E 4 HOH A 30 530 195 HOH HOH . 
E 4 HOH A 31 531 265 HOH HOH . 
E 4 HOH A 32 532 76 HOH HOH . 
E 4 HOH A 33 533 266 HOH HOH . 
E 4 HOH A 34 534 140 HOH HOH . 
E 4 HOH A 35 535 25 HOH HOH . 
E 4 HOH A 36 536 66 HOH HOH . 
E 4 HOH A 37 537 102 HOH HOH . 
E 4 HOH A 38 538 67 HOH HOH . 
E 4 HOH A 39 539 23 HOH HOH . 
E 4 HOH A 40 540 83 HOH HOH . 
E 4 HOH A 41 541 241 HOH HOH . 
E 4 HOH A 42 542 73 HOH HOH . 
E 4 HOH A 43 543 145 HOH HOH . 
E 4 HOH A 44 544 171 HOH HOH . 
E 4 HOH A 45 545 65 HOH HOH . 
E 4 HOH A 46 546 78 HOH HOH . 
E 4 HOH A 47 547 269 HOH HOH . 
E 4 HOH A 48 548 30 HOH HOH . 
E 4 HOH A 49 549 99 HOH HOH . 
E 4 HOH A 50 550 15 HOH HOH . 
E 4 HOH A 51 551 107 HOH HOH . 
E 4 HOH A 52 552 84 HOH HOH . 
E 4 HOH A 53 553 32 HOH HOH . 
E 4 HOH A 54 554 55 HOH HOH . 
E 4 HOH A 55 555 39 HOH HOH . 
E 4 HOH A 56 556 28 HOH HOH . 
E 4 HOH A 57 557 92 HOH HOH . 
E 4 HOH A 58 558 40 HOH HOH . 
E 4 HOH A 59 559 93 HOH HOH . 
E 4 HOH A 60 560 20 HOH HOH . 
E 4 HOH A 61 561 56 HOH HOH . 
E 4 HOH A 62 562 166 HOH HOH . 
E 4 HOH A 63 563 34 HOH HOH . 
E 4 HOH A 64 564 125 HOH HOH . 
E 4 HOH A 65 565 75 HOH HOH . 
E 4 HOH A 66 566 116 HOH HOH . 
E 4 HOH A 67 567 168 HOH HOH . 
E 4 HOH A 68 568 111 HOH HOH . 
E 4 HOH A 69 569 260 HOH HOH . 
E 4 HOH A 70 570 122 HOH HOH . 
E 4 HOH A 71 571 41 HOH HOH . 
E 4 HOH A 72 572 19 HOH HOH . 
E 4 HOH A 73 573 18 HOH HOH . 
E 4 HOH A 74 574 180 HOH HOH . 
E 4 HOH A 75 575 137 HOH HOH . 
E 4 HOH A 76 576 77 HOH HOH . 
E 4 HOH A 77 577 108 HOH HOH . 
E 4 HOH A 78 578 24 HOH HOH . 
E 4 HOH A 79 579 121 HOH HOH . 
E 4 HOH A 80 580 17 HOH HOH . 
E 4 HOH A 81 581 130 HOH HOH . 
E 4 HOH A 82 582 187 HOH HOH . 
E 4 HOH A 83 583 2 HOH HOH . 
E 4 HOH A 84 584 37 HOH HOH . 
E 4 HOH A 85 585 33 HOH HOH . 
E 4 HOH A 86 586 103 HOH HOH . 
E 4 HOH A 87 587 110 HOH HOH . 
E 4 HOH A 88 588 3 HOH HOH . 
E 4 HOH A 89 589 272 HOH HOH . 
E 4 HOH A 90 590 106 HOH HOH . 
E 4 HOH A 91 591 182 HOH HOH . 
E 4 HOH A 92 592 170 HOH HOH . 
E 4 HOH A 93 593 91 HOH HOH . 
E 4 HOH A 94 594 5 HOH HOH . 
E 4 HOH A 95 595 72 HOH HOH . 
E 4 HOH A 96 596 221 HOH HOH . 
E 4 HOH A 97 597 164 HOH HOH . 
E 4 HOH A 98 598 175 HOH HOH . 
E 4 HOH A 99 599 88 HOH HOH . 
E 4 HOH A 100 600 147 HOH HOH . 
E 4 HOH A 101 601 14 HOH HOH . 
E 4 HOH A 102 602 36 HOH HOH . 
E 4 HOH A 103 603 12 HOH HOH . 
E 4 HOH A 104 604 148 HOH HOH . 
E 4 HOH A 105 605 179 HOH HOH . 
E 4 HOH A 106 606 150 HOH HOH . 
E 4 HOH A 107 607 22 HOH HOH . 
E 4 HOH A 108 608 123 HOH HOH . 
E 4 HOH A 109 609 7 HOH HOH . 
E 4 HOH A 110 610 90 HOH HOH . 
E 4 HOH A 111 611 277 HOH HOH . 
E 4 HOH A 112 612 16 HOH HOH . 
E 4 HOH A 113 613 11 HOH HOH . 
E 4 HOH A 114 614 8 HOH HOH . 
E 4 HOH A 115 615 1 HOH HOH . 
E 4 HOH A 116 616 181 HOH HOH . 
E 4 HOH A 117 617 163 HOH HOH . 
E 4 HOH A 118 618 196 HOH HOH . 
E 4 HOH A 119 619 85 HOH HOH . 
E 4 HOH A 120 620 4 HOH HOH . 
E 4 HOH A 121 621 270 HOH HOH . 
E 4 HOH A 122 622 68 HOH HOH . 
E 4 HOH A 123 623 38 HOH HOH . 
E 4 HOH A 124 624 276 HOH HOH . 
E 4 HOH A 125 625 105 HOH HOH . 
E 4 HOH A 126 626 126 HOH HOH . 
E 4 HOH A 127 627 51 HOH HOH . 
E 4 HOH A 128 628 95 HOH HOH . 
E 4 HOH A 129 629 6 HOH HOH . 
E 4 HOH A 130 630 87 HOH HOH . 
E 4 HOH A 131 631 242 HOH HOH . 
E 4 HOH A 132 632 117 HOH HOH . 
E 4 HOH A 133 633 26 HOH HOH . 
E 4 HOH A 134 634 97 HOH HOH . 
E 4 HOH A 135 635 131 HOH HOH . 
E 4 HOH A 136 636 42 HOH HOH . 
E 4 HOH A 137 637 233 HOH HOH . 
E 4 HOH A 138 638 183 HOH HOH . 
E 4 HOH A 139 639 149 HOH HOH . 
E 4 HOH A 140 640 112 HOH HOH . 
E 4 HOH A 141 641 216 HOH HOH . 
E 4 HOH A 142 642 80 HOH HOH . 
E 4 HOH A 143 643 217 HOH HOH . 
E 4 HOH A 144 644 169 HOH HOH . 
E 4 HOH A 145 645 249 HOH HOH . 
E 4 HOH A 146 646 54 HOH HOH . 
E 4 HOH A 147 647 100 HOH HOH . 
E 4 HOH A 148 648 82 HOH HOH . 
E 4 HOH A 149 649 120 HOH HOH . 
E 4 HOH A 150 650 141 HOH HOH . 
E 4 HOH A 151 651 139 HOH HOH . 
E 4 HOH A 152 652 70 HOH HOH . 
E 4 HOH A 153 653 247 HOH HOH . 
E 4 HOH A 154 654 101 HOH HOH . 
E 4 HOH A 155 655 124 HOH HOH . 
E 4 HOH A 156 656 158 HOH HOH . 
E 4 HOH A 157 657 44 HOH HOH . 
E 4 HOH A 158 658 89 HOH HOH . 
E 4 HOH A 159 659 152 HOH HOH . 
E 4 HOH A 160 660 204 HOH HOH . 
E 4 HOH A 161 661 60 HOH HOH . 
E 4 HOH A 162 662 162 HOH HOH . 
E 4 HOH A 163 663 63 HOH HOH . 
E 4 HOH A 164 664 31 HOH HOH . 
E 4 HOH A 165 665 119 HOH HOH . 
E 4 HOH A 166 666 118 HOH HOH . 
E 4 HOH A 167 667 86 HOH HOH . 
E 4 HOH A 168 668 189 HOH HOH . 
E 4 HOH A 169 669 239 HOH HOH . 
E 4 HOH A 170 670 43 HOH HOH . 
E 4 HOH A 171 671 214 HOH HOH . 
E 4 HOH A 172 672 215 HOH HOH . 
E 4 HOH A 173 673 46 HOH HOH . 
E 4 HOH A 174 674 230 HOH HOH . 
E 4 HOH A 175 675 81 HOH HOH . 
E 4 HOH A 176 676 52 HOH HOH . 
E 4 HOH A 177 677 133 HOH HOH . 
E 4 HOH A 178 678 94 HOH HOH . 
E 4 HOH A 179 679 61 HOH HOH . 
E 4 HOH A 180 680 59 HOH HOH . 
E 4 HOH A 181 681 104 HOH HOH . 
E 4 HOH A 182 682 49 HOH HOH . 
E 4 HOH A 183 683 259 HOH HOH . 
E 4 HOH A 184 684 21 HOH HOH . 
E 4 HOH A 185 685 203 HOH HOH . 
E 4 HOH A 186 686 192 HOH HOH . 
E 4 HOH A 187 687 144 HOH HOH . 
E 4 HOH A 188 688 9 HOH HOH . 
E 4 HOH A 189 689 254 HOH HOH . 
E 4 HOH A 190 690 274 HOH HOH . 
E 4 HOH A 191 691 185 HOH HOH . 
E 4 HOH A 192 692 223 HOH HOH . 
E 4 HOH A 193 693 237 HOH HOH . 
E 4 HOH A 194 694 13 HOH HOH . 
E 4 HOH A 195 695 200 HOH HOH . 
E 4 HOH A 196 696 138 HOH HOH . 
E 4 HOH A 197 697 220 HOH HOH . 
E 4 HOH A 198 698 113 HOH HOH . 
E 4 HOH A 199 699 275 HOH HOH . 
E 4 HOH A 200 700 212 HOH HOH . 
E 4 HOH A 201 701 172 HOH HOH . 
E 4 HOH A 202 702 255 HOH HOH . 
E 4 HOH A 203 703 154 HOH HOH . 
E 4 HOH A 204 704 225 HOH HOH . 
E 4 HOH A 205 705 208 HOH HOH . 
E 4 HOH A 206 706 250 HOH HOH . 
E 4 HOH A 207 707 136 HOH HOH . 
E 4 HOH A 208 708 129 HOH HOH . 
E 4 HOH A 209 709 128 HOH HOH . 
E 4 HOH A 210 710 135 HOH HOH . 
E 4 HOH A 211 711 271 HOH HOH . 
E 4 HOH A 212 712 47 HOH HOH . 
E 4 HOH A 213 713 186 HOH HOH . 
E 4 HOH A 214 714 246 HOH HOH . 
E 4 HOH A 215 715 155 HOH HOH . 
E 4 HOH A 216 716 142 HOH HOH . 
E 4 HOH A 217 717 27 HOH HOH . 
E 4 HOH A 218 718 268 HOH HOH . 
E 4 HOH A 219 719 262 HOH HOH . 
E 4 HOH A 220 720 176 HOH HOH . 
E 4 HOH A 221 721 267 HOH HOH . 
E 4 HOH A 222 722 79 HOH HOH . 
E 4 HOH A 223 723 199 HOH HOH . 
E 4 HOH A 224 724 151 HOH HOH . 
E 4 HOH A 225 725 231 HOH HOH . 
E 4 HOH A 226 726 244 HOH HOH . 
E 4 HOH A 227 727 273 HOH HOH . 
E 4 HOH A 228 728 256 HOH HOH . 
E 4 HOH A 229 729 193 HOH HOH . 
E 4 HOH A 230 730 222 HOH HOH . 
E 4 HOH A 231 731 50 HOH HOH . 
E 4 HOH A 232 732 165 HOH HOH . 
E 4 HOH A 233 733 127 HOH HOH . 
E 4 HOH A 234 734 109 HOH HOH . 
E 4 HOH A 235 735 263 HOH HOH . 
E 4 HOH A 236 736 235 HOH HOH . 
E 4 HOH A 237 737 153 HOH HOH . 
E 4 HOH A 238 738 210 HOH HOH . 
E 4 HOH A 239 739 234 HOH HOH . 
E 4 HOH A 240 740 264 HOH HOH . 
E 4 HOH A 241 741 167 HOH HOH . 
E 4 HOH A 242 742 257 HOH HOH . 
E 4 HOH A 243 743 278 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 3 23.359 8.388 0.112 1 54.65 ? C1 EDO 403 A 1 
HETATM 2 O O1 EDO . . . D 3 24.771 8.182 0.264 1 55.21 ? O1 EDO 403 A 1 
HETATM 3 C C2 EDO . . . D 3 22.795 9.18 1.29 1 54.3 ? C2 EDO 403 A 1 
HETATM 4 O O2 EDO . . . D 3 23.332 10.504 1.296 1 53.96 ? O2 EDO 403 A 1 
HETATM 5 H H11 EDO . . . D 3 22.855 7.421 0.048 1 65.64 ? H11 EDO 403 A 1 
HETATM 6 H H12 EDO . . . D 3 23.167 8.928 -0.817 1 65.64 ? H12 EDO 403 A 1 
HETATM 7 H HO1 EDO . . . D 3 25.091 7.606 -0.444 1 66.31 ? HO1 EDO 403 A 1 
HETATM 8 H H21 EDO . . . D 3 21.707 9.225 1.215 1 65.22 ? H21 EDO 403 A 1 
HETATM 9 H H22 EDO . . . D 3 23.047 8.677 2.225 1 65.22 ? H22 EDO 403 A 1 
HETATM 10 H HO2 EDO . . . D 3 22.995 10.984 2.065 1 64.81 ? HO2 EDO 403 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           233 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           10 
#