data_8QB2 # _model_server_result.job_id NnhYf3T9ztCFyLcHoORZMg _model_server_result.datetime_utc '2025-06-28 03:49:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qb2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 8QB2 # _exptl.entry_id 8QB2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 360.517 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2-methyl-4-(3-methylbutyl)-5-(2-piperazin-1-yl-1,3-thiazol-4-yl)-1~{H}-pyrrol-3-yl]ethanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8QB2 _cell.length_a 60.49 _cell.length_b 60.49 _cell.length_c 62.234 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QB2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H28 N4 O S' _chem_comp.formula_weight 360.517 _chem_comp.id GKI _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2-methyl-4-(3-methylbutyl)-5-(2-piperazin-1-yl-1,3-thiazol-4-yl)-1~{H}-pyrrol-3-yl]ethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C03 C02 GKI sing 83 n n C01 C02 GKI sing 84 n n C02 C04 GKI sing 85 n n C04 C05 GKI sing 86 n n O13 C11 GKI doub 87 n n C12 C11 GKI sing 88 n n C11 C10 GKI sing 89 n n C05 C06 GKI sing 90 n n C10 C06 GKI sing 91 n y C10 C09 GKI doub 92 n y C06 C07 GKI doub 93 n y C14 C09 GKI sing 94 n n C09 N08 GKI sing 95 n y C07 N08 GKI sing 96 n y C07 C15 GKI sing 97 n n C16 C15 GKI doub 98 n y C16 S17 GKI sing 99 n y C15 N19 GKI sing 100 n y S17 C18 GKI sing 101 n y N19 C18 GKI doub 102 n y C18 N20 GKI sing 103 n n N20 C21 GKI sing 104 n n N20 C25 GKI sing 105 n n C21 C22 GKI sing 106 n n C25 C24 GKI sing 107 n n C22 N23 GKI sing 108 n n C24 N23 GKI sing 109 n n C12 H123 GKI sing 110 n n C12 H121 GKI sing 111 n n C12 H122 GKI sing 112 n n C14 H142 GKI sing 113 n n C14 H143 GKI sing 114 n n C14 H141 GKI sing 115 n n C25 H252 GKI sing 116 n n C25 H251 GKI sing 117 n n C16 H161 GKI sing 118 n n C01 H012 GKI sing 119 n n C01 H011 GKI sing 120 n n C01 H013 GKI sing 121 n n C02 H021 GKI sing 122 n n C03 H033 GKI sing 123 n n C03 H032 GKI sing 124 n n C03 H031 GKI sing 125 n n C04 H041 GKI sing 126 n n C04 H042 GKI sing 127 n n C05 H052 GKI sing 128 n n C05 H051 GKI sing 129 n n C21 H211 GKI sing 130 n n C21 H212 GKI sing 131 n n C22 H221 GKI sing 132 n n C22 H222 GKI sing 133 n n C24 H241 GKI sing 134 n n C24 H242 GKI sing 135 n n N08 H081 GKI sing 136 n n N23 H231 GKI sing 137 n n # _atom_sites.entry_id 8QB2 _atom_sites.fract_transf_matrix[1][1] 0.016532 _atom_sites.fract_transf_matrix[1][2] 0.009545 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019089 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GKI A 1 801 801 GKI 403 . C 3 NO3 A 1 802 901 NO3 NO3 . D 4 HOH A 1 901 85 HOH HOH . D 4 HOH A 2 902 69 HOH HOH . D 4 HOH A 3 903 68 HOH HOH . D 4 HOH A 4 904 71 HOH HOH . D 4 HOH A 5 905 104 HOH HOH . D 4 HOH A 6 906 90 HOH HOH . D 4 HOH A 7 907 113 HOH HOH . D 4 HOH A 8 908 35 HOH HOH . D 4 HOH A 9 909 27 HOH HOH . D 4 HOH A 10 910 43 HOH HOH . D 4 HOH A 11 911 54 HOH HOH . D 4 HOH A 12 912 72 HOH HOH . D 4 HOH A 13 913 34 HOH HOH . D 4 HOH A 14 914 91 HOH HOH . D 4 HOH A 15 915 9 HOH HOH . D 4 HOH A 16 916 1 HOH HOH . D 4 HOH A 17 917 17 HOH HOH . D 4 HOH A 18 918 31 HOH HOH . D 4 HOH A 19 919 81 HOH HOH . D 4 HOH A 20 920 10 HOH HOH . D 4 HOH A 21 921 26 HOH HOH . D 4 HOH A 22 922 62 HOH HOH . D 4 HOH A 23 923 92 HOH HOH . D 4 HOH A 24 924 42 HOH HOH . D 4 HOH A 25 925 28 HOH HOH . D 4 HOH A 26 926 80 HOH HOH . D 4 HOH A 27 927 60 HOH HOH . D 4 HOH A 28 928 20 HOH HOH . D 4 HOH A 29 929 7 HOH HOH . D 4 HOH A 30 930 37 HOH HOH . D 4 HOH A 31 931 87 HOH HOH . D 4 HOH A 32 932 79 HOH HOH . D 4 HOH A 33 933 29 HOH HOH . D 4 HOH A 34 934 86 HOH HOH . D 4 HOH A 35 935 111 HOH HOH . D 4 HOH A 36 936 12 HOH HOH . D 4 HOH A 37 937 51 HOH HOH . D 4 HOH A 38 938 50 HOH HOH . D 4 HOH A 39 939 38 HOH HOH . D 4 HOH A 40 940 8 HOH HOH . D 4 HOH A 41 941 6 HOH HOH . D 4 HOH A 42 942 23 HOH HOH . D 4 HOH A 43 943 3 HOH HOH . D 4 HOH A 44 944 64 HOH HOH . D 4 HOH A 45 945 109 HOH HOH . D 4 HOH A 46 946 18 HOH HOH . D 4 HOH A 47 947 70 HOH HOH . D 4 HOH A 48 948 77 HOH HOH . D 4 HOH A 49 949 11 HOH HOH . D 4 HOH A 50 950 100 HOH HOH . D 4 HOH A 51 951 52 HOH HOH . D 4 HOH A 52 952 33 HOH HOH . D 4 HOH A 53 953 19 HOH HOH . D 4 HOH A 54 954 30 HOH HOH . D 4 HOH A 55 955 45 HOH HOH . D 4 HOH A 56 956 16 HOH HOH . D 4 HOH A 57 957 14 HOH HOH . D 4 HOH A 58 958 96 HOH HOH . D 4 HOH A 59 959 24 HOH HOH . D 4 HOH A 60 960 25 HOH HOH . D 4 HOH A 61 961 75 HOH HOH . D 4 HOH A 62 962 36 HOH HOH . D 4 HOH A 63 963 63 HOH HOH . D 4 HOH A 64 964 2 HOH HOH . D 4 HOH A 65 965 4 HOH HOH . D 4 HOH A 66 966 49 HOH HOH . D 4 HOH A 67 967 13 HOH HOH . D 4 HOH A 68 968 53 HOH HOH . D 4 HOH A 69 969 112 HOH HOH . D 4 HOH A 70 970 5 HOH HOH . D 4 HOH A 71 971 65 HOH HOH . D 4 HOH A 72 972 95 HOH HOH . D 4 HOH A 73 973 32 HOH HOH . D 4 HOH A 74 974 15 HOH HOH . D 4 HOH A 75 975 78 HOH HOH . D 4 HOH A 76 976 107 HOH HOH . D 4 HOH A 77 977 44 HOH HOH . D 4 HOH A 78 978 22 HOH HOH . D 4 HOH A 79 979 82 HOH HOH . D 4 HOH A 80 980 117 HOH HOH . D 4 HOH A 81 981 56 HOH HOH . D 4 HOH A 82 982 83 HOH HOH . D 4 HOH A 83 983 105 HOH HOH . D 4 HOH A 84 984 58 HOH HOH . D 4 HOH A 85 985 89 HOH HOH . D 4 HOH A 86 986 99 HOH HOH . D 4 HOH A 87 987 67 HOH HOH . D 4 HOH A 88 988 106 HOH HOH . D 4 HOH A 89 989 102 HOH HOH . D 4 HOH A 90 990 97 HOH HOH . D 4 HOH A 91 991 84 HOH HOH . D 4 HOH A 92 992 101 HOH HOH . D 4 HOH A 93 993 93 HOH HOH . D 4 HOH A 94 994 116 HOH HOH . D 4 HOH A 95 995 48 HOH HOH . D 4 HOH A 96 996 46 HOH HOH . D 4 HOH A 97 997 59 HOH HOH . D 4 HOH A 98 998 103 HOH HOH . D 4 HOH A 99 999 114 HOH HOH . D 4 HOH A 100 1000 40 HOH HOH . D 4 HOH A 101 1001 41 HOH HOH . D 4 HOH A 102 1002 98 HOH HOH . D 4 HOH A 103 1003 76 HOH HOH . D 4 HOH A 104 1004 119 HOH HOH . D 4 HOH A 105 1005 94 HOH HOH . D 4 HOH A 106 1006 66 HOH HOH . D 4 HOH A 107 1007 73 HOH HOH . D 4 HOH A 108 1008 115 HOH HOH . D 4 HOH A 109 1009 57 HOH HOH . D 4 HOH A 110 1010 47 HOH HOH . D 4 HOH A 111 1011 61 HOH HOH . D 4 HOH A 112 1012 74 HOH HOH . D 4 HOH A 113 1013 21 HOH HOH . D 4 HOH A 114 1014 118 HOH HOH . D 4 HOH A 115 1015 55 HOH HOH . D 4 HOH A 116 1016 120 HOH HOH . D 4 HOH A 117 1017 110 HOH HOH . D 4 HOH A 118 1018 39 HOH HOH . D 4 HOH A 119 1019 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 GKI . . . B 2 -13.891 -0.246 -7.456 1 24.59 ? C11 GKI 801 A 1 HETATM 2 C C12 GKI . . . B 2 -12.684 0.732 -7.382 1 27.1 ? C12 GKI 801 A 1 HETATM 3 C C14 GKI . . . B 2 -16.506 -2.019 -7.258 1 25.46 ? C14 GKI 801 A 1 HETATM 4 C C15 GKI . . . B 2 -14.191 -2.633 -2.796 1 34.32 ? C15 GKI 801 A 1 HETATM 5 C C18 GKI . . . B 2 -12.849 -2.971 -0.895 1 43.28 ? C18 GKI 801 A 1 HETATM 6 N N20 GKI . . . B 2 -11.659 -2.906 -0.035 1 50.19 ? N20 GKI 801 A 1 HETATM 7 C C25 GKI . . . B 2 -11.501 -3.585 1.315 1 53.59 ? C25 GKI 801 A 1 HETATM 8 C C16 GKI . . . B 2 -15.076 -3.328 -1.89 1 39.58 ? C16 GKI 801 A 1 HETATM 9 C C01 GKI . . . B 2 -9.336 -0.741 -3.334 1 39.43 ? C01 GKI 801 A 1 HETATM 10 C C02 GKI . . . B 2 -9.724 -0.763 -4.79 1 36.36 ? C02 GKI 801 A 1 HETATM 11 C C03 GKI . . . B 2 -8.668 -1.557 -5.633 1 38.66 ? C03 GKI 801 A 1 HETATM 12 C C04 GKI . . . B 2 -11.115 -1.453 -4.948 1 30.9 ? C04 GKI 801 A 1 HETATM 13 C C05 GKI . . . B 2 -12.265 -0.602 -4.501 1 28.04 ? C05 GKI 801 A 1 HETATM 14 C C06 GKI . . . B 2 -13.649 -1.231 -5.023 1 25.22 ? C06 GKI 801 A 1 HETATM 15 C C07 GKI . . . B 2 -14.467 -2.112 -4.253 1 26.3 ? C07 GKI 801 A 1 HETATM 16 C C09 GKI . . . B 2 -15.451 -1.832 -6.213 1 24.74 ? C09 GKI 801 A 1 HETATM 17 C C10 GKI . . . B 2 -14.28 -1.07 -6.259 1 24.54 ? C10 GKI 801 A 1 HETATM 18 C C21 GKI . . . B 2 -10.436 -2.139 -0.471 1 53.43 ? C21 GKI 801 A 1 HETATM 19 C C22 GKI . . . B 2 -9.188 -3.006 -0.352 1 56.27 ? C22 GKI 801 A 1 HETATM 20 C C24 GKI . . . B 2 -10.198 -4.341 1.392 1 56.13 ? C24 GKI 801 A 1 HETATM 21 N N08 GKI . . . B 2 -15.523 -2.432 -5.002 1 25.72 ? N08 GKI 801 A 1 HETATM 22 N N19 GKI . . . B 2 -12.878 -2.457 -2.179 1 38.04 ? N19 GKI 801 A 1 HETATM 23 N N23 GKI . . . B 2 -9.053 -3.532 0.964 1 57.86 ? N23 GKI 801 A 1 HETATM 24 O O13 GKI . . . B 2 -14.503 -0.295 -8.433 1 26.69 ? O13 GKI 801 A 1 HETATM 25 S S17 GKI . . . B 2 -14.292 -3.615 -0.511 1 41.73 ? S17 GKI 801 A 1 HETATM 26 H H123 GKI . . . B 2 -11.857 0.227 -7.413 1 32.52 ? H123 GKI 801 A 1 HETATM 27 H H121 GKI . . . B 2 -12.717 1.344 -8.135 1 32.52 ? H121 GKI 801 A 1 HETATM 28 H H122 GKI . . . B 2 -12.728 1.239 -6.556 1 32.52 ? H122 GKI 801 A 1 HETATM 29 H H142 GKI . . . B 2 -16.286 -1.488 -8.04 1 30.56 ? H142 GKI 801 A 1 HETATM 30 H H143 GKI . . . B 2 -17.364 -1.735 -6.905 1 30.56 ? H143 GKI 801 A 1 HETATM 31 H H141 GKI . . . B 2 -16.552 -2.956 -7.505 1 30.56 ? H141 GKI 801 A 1 HETATM 32 H H252 GKI . . . B 2 -12.235 -4.205 1.447 1 64.31 ? H252 GKI 801 A 1 HETATM 33 H H251 GKI . . . B 2 -11.518 -2.912 2.013 1 64.31 ? H251 GKI 801 A 1 HETATM 34 H H161 GKI . . . B 2 -15.962 -3.551 -2.064 1 47.5 ? H161 GKI 801 A 1 HETATM 35 H H012 GKI . . . B 2 -9.291 -1.649 -2.998 1 47.32 ? H012 GKI 801 A 1 HETATM 36 H H011 GKI . . . B 2 -10.002 -0.243 -2.834 1 47.32 ? H011 GKI 801 A 1 HETATM 37 H H013 GKI . . . B 2 -8.471 -0.314 -3.234 1 47.32 ? H013 GKI 801 A 1 HETATM 38 H H021 GKI . . . B 2 -9.78 0.146 -5.124 1 43.64 ? H021 GKI 801 A 1 HETATM 39 H H033 GKI . . . B 2 -8.579 -1.146 -6.507 1 46.39 ? H033 GKI 801 A 1 HETATM 40 H H032 GKI . . . B 2 -8.963 -2.475 -5.734 1 46.39 ? H032 GKI 801 A 1 HETATM 41 H H031 GKI . . . B 2 -7.811 -1.541 -5.18 1 46.39 ? H031 GKI 801 A 1 HETATM 42 H H041 GKI . . . B 2 -11.114 -2.271 -4.426 1 37.09 ? H041 GKI 801 A 1 HETATM 43 H H042 GKI . . . B 2 -11.243 -1.681 -5.882 1 37.09 ? H042 GKI 801 A 1 HETATM 44 H H052 GKI . . . B 2 -12.163 0.291 -4.865 1 33.65 ? H052 GKI 801 A 1 HETATM 45 H H051 GKI . . . B 2 -12.273 -0.558 -3.532 1 33.65 ? H051 GKI 801 A 1 HETATM 46 H H211 GKI . . . B 2 -10.337 -1.353 0.089 1 64.11 ? H211 GKI 801 A 1 HETATM 47 H H212 GKI . . . B 2 -10.543 -1.865 -1.395 1 64.11 ? H212 GKI 801 A 1 HETATM 48 H H221 GKI . . . B 2 -8.407 -2.47 -0.563 1 67.52 ? H221 GKI 801 A 1 HETATM 49 H H222 GKI . . . B 2 -9.252 -3.744 -0.979 1 67.52 ? H222 GKI 801 A 1 HETATM 50 H H241 GKI . . . B 2 -10.057 -4.627 2.308 1 67.35 ? H241 GKI 801 A 1 HETATM 51 H H242 GKI . . . B 2 -10.256 -5.122 0.821 1 67.35 ? H242 GKI 801 A 1 HETATM 52 H H081 GKI . . . B 2 -16.155 -2.961 -4.756 1 30.87 ? H081 GKI 801 A 1 HETATM 53 H H231 GKI . . . B 2 -8.31 -4.019 1.014 1 69.44 ? H231 GKI 801 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 380 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 53 #