data_8QB6
#
_model_server_result.job_id            IYgRMYgu0AzPsA6mry3LQg 
_model_server_result.datetime_utc      '2025-04-05 10:41:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qb6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    8QB6 
#
_exptl.entry_id    8QB6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              230.261 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-ACETAMIDO-6-DEOXY-CASTANOSPERMINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8QB6 
_cell.length_a            89.688 
_cell.length_b            89.688 
_cell.length_c            97.685 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QB6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H18 N2 O4' 
_chem_comp.formula_weight    230.261 
_chem_comp.id                GC2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-ACETAMIDO-6-DEOXY-CASTANOSPERMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     N-[(1S,6S,7R,8R,8AR)-1,7,8-TRIHYDROXYOCTAHYDROINDOLIZIN-6-YL]ACETAMIDE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C8 GC2 doub 70 n n 
C8 C10 GC2 sing 71 n n 
C8 N2 GC2 sing 72 n n 
N2 C2 GC2 sing 73 n n 
C2 C3 GC2 sing 74 n n 
C2 C1 GC2 sing 75 n n 
C3 O4 GC2 sing 76 n n 
C3 C4 GC2 sing 77 n n 
C4 O2 GC2 sing 78 n n 
C4 C5 GC2 sing 79 n n 
C1 N1 GC2 sing 80 n n 
N1 C5 GC2 sing 81 n n 
N1 C9 GC2 sing 82 n n 
C5 C6 GC2 sing 83 n n 
C9 C7 GC2 sing 84 n n 
C7 C6 GC2 sing 85 n n 
C6 O3 GC2 sing 86 n n 
C10 H101 GC2 sing 87 n n 
C10 H102 GC2 sing 88 n n 
C10 H103 GC2 sing 89 n n 
N2 H2 GC2 sing 90 n n 
C2 HA GC2 sing 91 n n 
C3 H3 GC2 sing 92 n n 
C1 H11C GC2 sing 93 n n 
C1 H12C GC2 sing 94 n n 
O4 H4 GC2 sing 95 n n 
C4 HB GC2 sing 96 n n 
O2 HC GC2 sing 97 n n 
C5 H5 GC2 sing 98 n n 
C9 H91C GC2 sing 99 n n 
C9 H92C GC2 sing 100 n n 
C6 H6 GC2 sing 101 n n 
C7 H71C GC2 sing 102 n n 
C7 H72C GC2 sing 103 n n 
O3 HD GC2 sing 104 n n 
#
_atom_sites.entry_id                     8QB6 
_atom_sites.fract_transf_matrix[1][1]    0.01115 
_atom_sites.fract_transf_matrix[1][2]    0.006437 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012875 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010237 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GC2 A 1 401 377 GC2 GC2 . 
C 3 MPD A 1 402 1 MPD MPD . 
D 3 MPD A 1 403 2 MPD MPD . 
E 4 HOH A 1 501 123 HOH HOH . 
E 4 HOH A 2 502 141 HOH HOH . 
E 4 HOH A 3 503 165 HOH HOH . 
E 4 HOH A 4 504 205 HOH HOH . 
E 4 HOH A 5 505 106 HOH HOH . 
E 4 HOH A 6 506 162 HOH HOH . 
E 4 HOH A 7 507 187 HOH HOH . 
E 4 HOH A 8 508 184 HOH HOH . 
E 4 HOH A 9 509 118 HOH HOH . 
E 4 HOH A 10 510 174 HOH HOH . 
E 4 HOH A 11 511 104 HOH HOH . 
E 4 HOH A 12 512 188 HOH HOH . 
E 4 HOH A 13 513 176 HOH HOH . 
E 4 HOH A 14 514 139 HOH HOH . 
E 4 HOH A 15 515 37 HOH HOH . 
E 4 HOH A 16 516 204 HOH HOH . 
E 4 HOH A 17 517 90 HOH HOH . 
E 4 HOH A 18 518 181 HOH HOH . 
E 4 HOH A 19 519 182 HOH HOH . 
E 4 HOH A 20 520 5 HOH HOH . 
E 4 HOH A 21 521 32 HOH HOH . 
E 4 HOH A 22 522 128 HOH HOH . 
E 4 HOH A 23 523 18 HOH HOH . 
E 4 HOH A 24 524 87 HOH HOH . 
E 4 HOH A 25 525 149 HOH HOH . 
E 4 HOH A 26 526 52 HOH HOH . 
E 4 HOH A 27 527 6 HOH HOH . 
E 4 HOH A 28 528 134 HOH HOH . 
E 4 HOH A 29 529 43 HOH HOH . 
E 4 HOH A 30 530 35 HOH HOH . 
E 4 HOH A 31 531 10 HOH HOH . 
E 4 HOH A 32 532 112 HOH HOH . 
E 4 HOH A 33 533 175 HOH HOH . 
E 4 HOH A 34 534 12 HOH HOH . 
E 4 HOH A 35 535 60 HOH HOH . 
E 4 HOH A 36 536 78 HOH HOH . 
E 4 HOH A 37 537 69 HOH HOH . 
E 4 HOH A 38 538 142 HOH HOH . 
E 4 HOH A 39 539 73 HOH HOH . 
E 4 HOH A 40 540 100 HOH HOH . 
E 4 HOH A 41 541 33 HOH HOH . 
E 4 HOH A 42 542 70 HOH HOH . 
E 4 HOH A 43 543 152 HOH HOH . 
E 4 HOH A 44 544 16 HOH HOH . 
E 4 HOH A 45 545 50 HOH HOH . 
E 4 HOH A 46 546 72 HOH HOH . 
E 4 HOH A 47 547 2 HOH HOH . 
E 4 HOH A 48 548 68 HOH HOH . 
E 4 HOH A 49 549 156 HOH HOH . 
E 4 HOH A 50 550 11 HOH HOH . 
E 4 HOH A 51 551 23 HOH HOH . 
E 4 HOH A 52 552 164 HOH HOH . 
E 4 HOH A 53 553 40 HOH HOH . 
E 4 HOH A 54 554 151 HOH HOH . 
E 4 HOH A 55 555 124 HOH HOH . 
E 4 HOH A 56 556 39 HOH HOH . 
E 4 HOH A 57 557 3 HOH HOH . 
E 4 HOH A 58 558 89 HOH HOH . 
E 4 HOH A 59 559 107 HOH HOH . 
E 4 HOH A 60 560 66 HOH HOH . 
E 4 HOH A 61 561 34 HOH HOH . 
E 4 HOH A 62 562 15 HOH HOH . 
E 4 HOH A 63 563 153 HOH HOH . 
E 4 HOH A 64 564 133 HOH HOH . 
E 4 HOH A 65 565 44 HOH HOH . 
E 4 HOH A 66 566 206 HOH HOH . 
E 4 HOH A 67 567 207 HOH HOH . 
E 4 HOH A 68 568 9 HOH HOH . 
E 4 HOH A 69 569 198 HOH HOH . 
E 4 HOH A 70 570 36 HOH HOH . 
E 4 HOH A 71 571 17 HOH HOH . 
E 4 HOH A 72 572 172 HOH HOH . 
E 4 HOH A 73 573 64 HOH HOH . 
E 4 HOH A 74 574 8 HOH HOH . 
E 4 HOH A 75 575 171 HOH HOH . 
E 4 HOH A 76 576 144 HOH HOH . 
E 4 HOH A 77 577 41 HOH HOH . 
E 4 HOH A 78 578 119 HOH HOH . 
E 4 HOH A 79 579 158 HOH HOH . 
E 4 HOH A 80 580 194 HOH HOH . 
E 4 HOH A 81 581 105 HOH HOH . 
E 4 HOH A 82 582 67 HOH HOH . 
E 4 HOH A 83 583 173 HOH HOH . 
E 4 HOH A 84 584 4 HOH HOH . 
E 4 HOH A 85 585 14 HOH HOH . 
E 4 HOH A 86 586 21 HOH HOH . 
E 4 HOH A 87 587 155 HOH HOH . 
E 4 HOH A 88 588 135 HOH HOH . 
E 4 HOH A 89 589 116 HOH HOH . 
E 4 HOH A 90 590 62 HOH HOH . 
E 4 HOH A 91 591 132 HOH HOH . 
E 4 HOH A 92 592 20 HOH HOH . 
E 4 HOH A 93 593 102 HOH HOH . 
E 4 HOH A 94 594 166 HOH HOH . 
E 4 HOH A 95 595 114 HOH HOH . 
E 4 HOH A 96 596 51 HOH HOH . 
E 4 HOH A 97 597 19 HOH HOH . 
E 4 HOH A 98 598 170 HOH HOH . 
E 4 HOH A 99 599 130 HOH HOH . 
E 4 HOH A 100 600 54 HOH HOH . 
E 4 HOH A 101 601 85 HOH HOH . 
E 4 HOH A 102 602 93 HOH HOH . 
E 4 HOH A 103 603 59 HOH HOH . 
E 4 HOH A 104 604 86 HOH HOH . 
E 4 HOH A 105 605 179 HOH HOH . 
E 4 HOH A 106 606 65 HOH HOH . 
E 4 HOH A 107 607 109 HOH HOH . 
E 4 HOH A 108 608 161 HOH HOH . 
E 4 HOH A 109 609 24 HOH HOH . 
E 4 HOH A 110 610 195 HOH HOH . 
E 4 HOH A 111 611 111 HOH HOH . 
E 4 HOH A 112 612 55 HOH HOH . 
E 4 HOH A 113 613 183 HOH HOH . 
E 4 HOH A 114 614 203 HOH HOH . 
E 4 HOH A 115 615 103 HOH HOH . 
E 4 HOH A 116 616 82 HOH HOH . 
E 4 HOH A 117 617 45 HOH HOH . 
E 4 HOH A 118 618 138 HOH HOH . 
E 4 HOH A 119 619 56 HOH HOH . 
E 4 HOH A 120 620 31 HOH HOH . 
E 4 HOH A 121 621 120 HOH HOH . 
E 4 HOH A 122 622 77 HOH HOH . 
E 4 HOH A 123 623 92 HOH HOH . 
E 4 HOH A 124 624 47 HOH HOH . 
E 4 HOH A 125 625 38 HOH HOH . 
E 4 HOH A 126 626 157 HOH HOH . 
E 4 HOH A 127 627 199 HOH HOH . 
E 4 HOH A 128 628 126 HOH HOH . 
E 4 HOH A 129 629 96 HOH HOH . 
E 4 HOH A 130 630 169 HOH HOH . 
E 4 HOH A 131 631 178 HOH HOH . 
E 4 HOH A 132 632 84 HOH HOH . 
E 4 HOH A 133 633 127 HOH HOH . 
E 4 HOH A 134 634 27 HOH HOH . 
E 4 HOH A 135 635 99 HOH HOH . 
E 4 HOH A 136 636 185 HOH HOH . 
E 4 HOH A 137 637 131 HOH HOH . 
E 4 HOH A 138 638 7 HOH HOH . 
E 4 HOH A 139 639 61 HOH HOH . 
E 4 HOH A 140 640 189 HOH HOH . 
E 4 HOH A 141 641 48 HOH HOH . 
E 4 HOH A 142 642 94 HOH HOH . 
E 4 HOH A 143 643 108 HOH HOH . 
E 4 HOH A 144 644 117 HOH HOH . 
E 4 HOH A 145 645 29 HOH HOH . 
E 4 HOH A 146 646 75 HOH HOH . 
E 4 HOH A 147 647 30 HOH HOH . 
E 4 HOH A 148 648 42 HOH HOH . 
E 4 HOH A 149 649 63 HOH HOH . 
E 4 HOH A 150 650 154 HOH HOH . 
E 4 HOH A 151 651 200 HOH HOH . 
E 4 HOH A 152 652 80 HOH HOH . 
E 4 HOH A 153 653 58 HOH HOH . 
E 4 HOH A 154 654 28 HOH HOH . 
E 4 HOH A 155 655 13 HOH HOH . 
E 4 HOH A 156 656 49 HOH HOH . 
E 4 HOH A 157 657 168 HOH HOH . 
E 4 HOH A 158 658 25 HOH HOH . 
E 4 HOH A 159 659 137 HOH HOH . 
E 4 HOH A 160 660 159 HOH HOH . 
E 4 HOH A 161 661 98 HOH HOH . 
E 4 HOH A 162 662 129 HOH HOH . 
E 4 HOH A 163 663 196 HOH HOH . 
E 4 HOH A 164 664 81 HOH HOH . 
E 4 HOH A 165 665 192 HOH HOH . 
E 4 HOH A 166 666 57 HOH HOH . 
E 4 HOH A 167 667 150 HOH HOH . 
E 4 HOH A 168 668 147 HOH HOH . 
E 4 HOH A 169 669 163 HOH HOH . 
E 4 HOH A 170 670 143 HOH HOH . 
E 4 HOH A 171 671 110 HOH HOH . 
E 4 HOH A 172 672 201 HOH HOH . 
E 4 HOH A 173 673 113 HOH HOH . 
E 4 HOH A 174 674 191 HOH HOH . 
E 4 HOH A 175 675 97 HOH HOH . 
E 4 HOH A 176 676 71 HOH HOH . 
E 4 HOH A 177 677 167 HOH HOH . 
E 4 HOH A 178 678 91 HOH HOH . 
E 4 HOH A 179 679 202 HOH HOH . 
E 4 HOH A 180 680 177 HOH HOH . 
E 4 HOH A 181 681 76 HOH HOH . 
E 4 HOH A 182 682 145 HOH HOH . 
E 4 HOH A 183 683 115 HOH HOH . 
E 4 HOH A 184 684 125 HOH HOH . 
E 4 HOH A 185 685 101 HOH HOH . 
E 4 HOH A 186 686 46 HOH HOH . 
E 4 HOH A 187 687 146 HOH HOH . 
E 4 HOH A 188 688 26 HOH HOH . 
E 4 HOH A 189 689 186 HOH HOH . 
E 4 HOH A 190 690 197 HOH HOH . 
E 4 HOH A 191 691 180 HOH HOH . 
E 4 HOH A 192 692 160 HOH HOH . 
E 4 HOH A 193 693 53 HOH HOH . 
E 4 HOH A 194 694 83 HOH HOH . 
E 4 HOH A 195 695 140 HOH HOH . 
E 4 HOH A 196 696 136 HOH HOH . 
E 4 HOH A 197 697 95 HOH HOH . 
E 4 HOH A 198 698 190 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 GC2 . . . B 2 27.788 7.27 -13.817 1 21.18 0 O1 GC2 401 A 1 
HETATM 2 C C8 GC2 . . . B 2 27.339 7.847 -12.821 1 20.15 0 C8 GC2 401 A 1 
HETATM 3 C C10 GC2 . . . B 2 27.906 9.148 -12.337 1 19.6 0 C10 GC2 401 A 1 
HETATM 4 N N2 GC2 . . . B 2 26.325 7.342 -12.119 1 20.76 0 N2 GC2 401 A 1 
HETATM 5 C C2 GC2 . . . B 2 25.738 6.015 -12.304 1 21.8 0 C2 GC2 401 A 1 
HETATM 6 C C3 GC2 . . . B 2 26.587 4.955 -11.602 1 24.29 0 C3 GC2 401 A 1 
HETATM 7 O O4 GC2 . . . B 2 26.037 4.736 -10.305 1 23.85 0 O4 GC2 401 A 1 
HETATM 8 C C4 GC2 . . . B 2 26.536 3.638 -12.372 1 23.18 0 C4 GC2 401 A 1 
HETATM 9 O O2 GC2 . . . B 2 27.255 2.614 -11.688 1 25.13 0 O2 GC2 401 A 1 
HETATM 10 C C1 GC2 . . . B 2 25.388 5.638 -13.748 1 23.72 0 C1 GC2 401 A 1 
HETATM 11 N N1 GC2 . . . B 2 26.523 5.025 -14.434 1 21.18 0 N1 GC2 401 A 1 
HETATM 12 C C5 GC2 . . . B 2 27.148 3.855 -13.748 1 23.13 0 C5 GC2 401 A 1 
HETATM 13 C C9 GC2 . . . B 2 26.253 4.627 -15.856 1 23.73 0 C9 GC2 401 A 1 
HETATM 14 C C7 GC2 . . . B 2 27.112 3.423 -16.085 1 24.56 0 C7 GC2 401 A 1 
HETATM 15 C C6 GC2 . . . B 2 27.028 2.701 -14.74 1 23.89 0 C6 GC2 401 A 1 
HETATM 16 O O3 GC2 . . . B 2 25.799 1.997 -14.608 1 27.48 0 O3 GC2 401 A 1 
HETATM 17 H H101 GC2 . . . B 2 28.633 9.422 -12.919 1 19.6 0 H101 GC2 401 A 1 
HETATM 18 H H102 GC2 . . . B 2 28.24 9.04 -11.432 1 19.55 0 H102 GC2 401 A 1 
HETATM 19 H H103 GC2 . . . B 2 27.213 9.828 -12.346 1 19.74 0 H103 GC2 401 A 1 
HETATM 20 H H2 GC2 . . . B 2 25.977 7.844 -11.49 1 20.88 0 H2 GC2 401 A 1 
HETATM 21 H HA GC2 . . . B 2 24.876 6.021 -11.818 1 22.16 0 HA GC2 401 A 1 
HETATM 22 H H3 GC2 . . . B 2 27.524 5.264 -11.528 1 23.61 0 H3 GC2 401 A 1 
HETATM 23 H H11C GC2 . . . B 2 25.116 6.443 -14.231 1 23.01 0 H11C GC2 401 A 1 
HETATM 24 H H12C GC2 . . . B 2 24.635 5.016 -13.746 1 22.82 0 H12C GC2 401 A 1 
HETATM 25 H H4 GC2 . . . B 2 25.807 3.933 -10.23 0 24.25 0 H4 GC2 401 A 1 
HETATM 26 H HB GC2 . . . B 2 25.594 3.357 -12.469 1 23.61 0 HB GC2 401 A 1 
HETATM 27 H HC GC2 . . . B 2 27.878 2.327 -12.172 0 25.77 0 HC GC2 401 A 1 
HETATM 28 H H5 GC2 . . . B 2 28.104 4.053 -13.625 1 22.79 0 H5 GC2 401 A 1 
HETATM 29 H H91C GC2 . . . B 2 26.494 5.365 -16.474 1 23.44 0 H91C GC2 401 A 1 
HETATM 30 H H92C GC2 . . . B 2 25.292 4.414 -15.98 1 23.42 0 H92C GC2 401 A 1 
HETATM 31 H H6 GC2 . . . B 2 27.79 2.066 -14.647 1 24.34 0 H6 GC2 401 A 1 
HETATM 32 H H71C GC2 . . . B 2 28.07 3.672 -16.301 1 24.21 0 H71C GC2 401 A 1 
HETATM 33 H H72C GC2 . . . B 2 26.757 2.836 -16.834 1 24.34 0 H72C GC2 401 A 1 
HETATM 34 H HD GC2 . . . B 2 25.34 2.112 -15.314 0 27.97 0 HD GC2 401 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           232 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           34 
#