data_8QBF # _model_server_result.job_id 0ViKdcFs3Kue-H0Spb4eig _model_server_result.datetime_utc '2024-11-08 14:50:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qbf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 8QBF # _exptl.entry_id 8QBF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 185.072 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOSERINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C3 H8 N O6 P' _chem_comp.formula_weight 185.072 _chem_comp.id SEP _chem_comp.mon_nstd_flag n _chem_comp.name PHOSPHOSERINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms PHOSPHONOSERINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SEP sing 301 n n N H SEP sing 302 n n N H2 SEP sing 303 n n CA CB SEP sing 304 n n CA C SEP sing 305 n n CA HA SEP sing 306 n n CB OG SEP sing 307 n n CB HB2 SEP sing 308 n n CB HB3 SEP sing 309 n n OG P SEP sing 310 n n C O SEP doub 311 n n C OXT SEP sing 312 n n OXT HXT SEP sing 313 n n P O1P SEP doub 314 n n P O2P SEP sing 315 n n P O3P SEP sing 316 n n O2P HOP2 SEP sing 317 n n O3P HOP3 SEP sing 318 n n # _atom_sites.entry_id 8QBF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 I3P A 1 301 202 I3P I3P . D 3 SEP A 1 302 2401 SEP SEP . E 2 I3P B 1 301 202 I3P I3P . F 3 SEP B 1 302 2401 SEP SEP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SEP . . . D 3 185.828 165.348 157.493 1 137.7 ? N SEP 302 A 1 HETATM 2 C CA SEP . . . D 3 186.234 166.471 158.321 1 137.7 ? CA SEP 302 A 1 HETATM 3 C CB SEP . . . D 3 185.034 167.034 159.081 1 137.7 ? CB SEP 302 A 1 HETATM 4 O OG SEP . . . D 3 184.137 166.002 159.368 1 137.7 ? OG SEP 302 A 1 HETATM 5 C C SEP . . . D 3 187.326 166.031 159.294 1 137.7 ? C SEP 302 A 1 HETATM 6 O O SEP . . . D 3 188.354 165.447 158.864 1 137.7 ? O SEP 302 A 1 HETATM 7 O OXT SEP . . . D 3 187.196 166.252 160.527 1 137.7 ? OXT SEP 302 A 1 HETATM 8 P P SEP . . . D 3 182.604 166.104 158.774 1 137.7 ? P SEP 302 A 1 HETATM 9 O O1P SEP . . . D 3 182.656 166.402 157.294 1 137.7 ? O1P SEP 302 A 1 HETATM 10 O O2P SEP . . . D 3 181.886 164.793 158.998 1 137.7 ? O2P SEP 302 A 1 HETATM 11 O O3P SEP . . . D 3 181.86 167.211 159.484 1 137.7 ? O3P SEP 302 A 1 # _model_server_stats.io_time_ms 98 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #