data_8QBH # _model_server_result.job_id w_56Dexb5dxuzFMPi_4b_Q _model_server_result.datetime_utc '2025-01-10 12:48:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qbh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8QBH # _exptl.entry_id 8QBH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 144.17 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-NAPHTHOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QBH _cell.length_a 55.94 _cell.length_b 154.73 _cell.length_c 92.09 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QBH _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_557 x,-y,-z+2 1 0 0 0 -1 0 0 0 -1 0 0 184.18 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H8 O' _chem_comp.formula_weight 144.17 _chem_comp.id 1NP _chem_comp.mon_nstd_flag . _chem_comp.name 1-NAPHTHOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms naphthalen-1-ol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 1NP sing 1 n n C1 C8A 1NP doub 2 n y C1 C2 1NP sing 3 n y C8A C8 1NP sing 4 n y C8A C4A 1NP sing 5 n y C8 C7 1NP doub 6 n y C7 C6 1NP sing 7 n y C2 C3 1NP doub 8 n y C3 C4 1NP sing 9 n y C4 C4A 1NP doub 10 n y C4A C5 1NP sing 11 n y C5 C6 1NP doub 12 n y O1 HO1 1NP sing 13 n n C8 H8 1NP sing 14 n n C7 H7 1NP sing 15 n n C2 H2 1NP sing 16 n n C3 H3 1NP sing 17 n n C4 H4 1NP sing 18 n n C5 H5 1NP sing 19 n n C6 H6 1NP sing 20 n n # _atom_sites.entry_id 8QBH _atom_sites.fract_transf_matrix[1][1] 0.017876 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006463 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010859 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1NP A 1 401 1 1NP 1NA . C 3 HOH A 1 501 44 HOH HOH . C 3 HOH A 2 502 91 HOH HOH . C 3 HOH A 3 503 105 HOH HOH . C 3 HOH A 4 504 79 HOH HOH . C 3 HOH A 5 505 49 HOH HOH . C 3 HOH A 6 506 34 HOH HOH . C 3 HOH A 7 507 30 HOH HOH . C 3 HOH A 8 508 28 HOH HOH . C 3 HOH A 9 509 22 HOH HOH . C 3 HOH A 10 510 70 HOH HOH . C 3 HOH A 11 511 4 HOH HOH . C 3 HOH A 12 512 78 HOH HOH . C 3 HOH A 13 513 29 HOH HOH . C 3 HOH A 14 514 52 HOH HOH . C 3 HOH A 15 515 101 HOH HOH . C 3 HOH A 16 516 100 HOH HOH . C 3 HOH A 17 517 75 HOH HOH . C 3 HOH A 18 518 2 HOH HOH . C 3 HOH A 19 519 15 HOH HOH . C 3 HOH A 20 520 12 HOH HOH . C 3 HOH A 21 521 32 HOH HOH . C 3 HOH A 22 522 23 HOH HOH . C 3 HOH A 23 523 89 HOH HOH . C 3 HOH A 24 524 96 HOH HOH . C 3 HOH A 25 525 31 HOH HOH . C 3 HOH A 26 526 13 HOH HOH . C 3 HOH A 27 527 40 HOH HOH . C 3 HOH A 28 528 108 HOH HOH . C 3 HOH A 29 529 8 HOH HOH . C 3 HOH A 30 530 74 HOH HOH . C 3 HOH A 31 531 36 HOH HOH . C 3 HOH A 32 532 60 HOH HOH . C 3 HOH A 33 533 104 HOH HOH . C 3 HOH A 34 534 46 HOH HOH . C 3 HOH A 35 535 35 HOH HOH . C 3 HOH A 36 536 7 HOH HOH . C 3 HOH A 37 537 69 HOH HOH . C 3 HOH A 38 538 5 HOH HOH . C 3 HOH A 39 539 14 HOH HOH . C 3 HOH A 40 540 48 HOH HOH . C 3 HOH A 41 541 43 HOH HOH . C 3 HOH A 42 542 27 HOH HOH . C 3 HOH A 43 543 37 HOH HOH . C 3 HOH A 44 544 24 HOH HOH . C 3 HOH A 45 545 93 HOH HOH . C 3 HOH A 46 546 17 HOH HOH . C 3 HOH A 47 547 80 HOH HOH . C 3 HOH A 48 548 92 HOH HOH . C 3 HOH A 49 549 87 HOH HOH . C 3 HOH A 50 550 66 HOH HOH . C 3 HOH A 51 551 95 HOH HOH . C 3 HOH A 52 552 71 HOH HOH . C 3 HOH A 53 553 39 HOH HOH . C 3 HOH A 54 554 57 HOH HOH . C 3 HOH A 55 555 1 HOH HOH . C 3 HOH A 56 556 64 HOH HOH . C 3 HOH A 57 557 51 HOH HOH . C 3 HOH A 58 558 6 HOH HOH . C 3 HOH A 59 559 54 HOH HOH . C 3 HOH A 60 560 81 HOH HOH . C 3 HOH A 61 561 3 HOH HOH . C 3 HOH A 62 562 9 HOH HOH . C 3 HOH A 63 563 16 HOH HOH . C 3 HOH A 64 564 38 HOH HOH . C 3 HOH A 65 565 83 HOH HOH . C 3 HOH A 66 566 25 HOH HOH . C 3 HOH A 67 567 56 HOH HOH . C 3 HOH A 68 568 84 HOH HOH . C 3 HOH A 69 569 102 HOH HOH . C 3 HOH A 70 570 50 HOH HOH . C 3 HOH A 71 571 10 HOH HOH . C 3 HOH A 72 572 61 HOH HOH . C 3 HOH A 73 573 55 HOH HOH . C 3 HOH A 74 574 62 HOH HOH . C 3 HOH A 75 575 59 HOH HOH . C 3 HOH A 76 576 11 HOH HOH . C 3 HOH A 77 577 21 HOH HOH . C 3 HOH A 78 578 119 HOH HOH . C 3 HOH A 79 579 45 HOH HOH . C 3 HOH A 80 580 106 HOH HOH . C 3 HOH A 81 581 47 HOH HOH . C 3 HOH A 82 582 85 HOH HOH . C 3 HOH A 83 583 65 HOH HOH . C 3 HOH A 84 584 98 HOH HOH . C 3 HOH A 85 585 18 HOH HOH . C 3 HOH A 86 586 77 HOH HOH . C 3 HOH A 87 587 90 HOH HOH . C 3 HOH A 88 588 97 HOH HOH . C 3 HOH A 89 589 73 HOH HOH . C 3 HOH A 90 590 41 HOH HOH . C 3 HOH A 91 591 86 HOH HOH . C 3 HOH A 92 592 33 HOH HOH . C 3 HOH A 93 593 94 HOH HOH . C 3 HOH A 94 594 19 HOH HOH . C 3 HOH A 95 595 114 HOH HOH . C 3 HOH A 96 596 76 HOH HOH . C 3 HOH A 97 597 107 HOH HOH . C 3 HOH A 98 598 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 1NP . . . B 2 7.784 18.826 94.987 1 54.74 ? O1 1NP 401 A 1 HETATM 2 C C1 1NP . . . B 2 8.264 17.74 94.299 1 51.6 ? C1 1NP 401 A 1 HETATM 3 C C8A 1NP . . . B 2 7.325 16.975 93.553 1 51.59 ? C8A 1NP 401 A 1 HETATM 4 C C8 1NP . . . B 2 5.947 17.306 93.511 1 52 ? C8 1NP 401 A 1 HETATM 5 C C7 1NP . . . B 2 5.075 16.542 92.785 1 52.29 ? C7 1NP 401 A 1 HETATM 6 C C2 1NP . . . B 2 9.586 17.396 94.319 1 50.16 ? C2 1NP 401 A 1 HETATM 7 C C3 1NP . . . B 2 10.031 16.273 93.604 1 49.96 ? C3 1NP 401 A 1 HETATM 8 C C4 1NP . . . B 2 9.164 15.516 92.881 1 50.87 ? C4 1NP 401 A 1 HETATM 9 C C4A 1NP . . . B 2 7.786 15.84 92.832 1 50.54 ? C4A 1NP 401 A 1 HETATM 10 C C5 1NP . . . B 2 6.848 15.081 92.092 1 49.96 ? C5 1NP 401 A 1 HETATM 11 C C6 1NP . . . B 2 5.532 15.422 92.072 1 50.35 ? C6 1NP 401 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 11 #