data_8QBI # _model_server_result.job_id WptEe9WYh_R1InRjIuG6Zg _model_server_result.datetime_utc '2025-01-10 15:45:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qbi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8QBI # _exptl.entry_id 8QBI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QBI _cell.length_a 54.54 _cell.length_b 154.74 _cell.length_c 91.36 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QBI _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_557 x,-y,-z+2 1 0 0 0 -1 0 0 0 -1 0 0 182.72 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 89 n n C1 C2 EDO sing 90 n n C1 H11 EDO sing 91 n n C1 H12 EDO sing 92 n n O1 HO1 EDO sing 93 n n C2 O2 EDO sing 94 n n C2 H21 EDO sing 95 n n C2 H22 EDO sing 96 n n O2 HO2 EDO sing 97 n n # _atom_sites.entry_id 8QBI _atom_sites.fract_transf_matrix[1][1] 0.018335 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006462 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010946 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 401 1 ACT ACT . C 3 EDO A 1 402 1 EDO EDO . D 4 PG4 A 1 403 1 PG4 PG4 . E 5 HOH A 1 501 23 HOH HOH . E 5 HOH A 2 502 326 HOH HOH . E 5 HOH A 3 503 148 HOH HOH . E 5 HOH A 4 504 116 HOH HOH . E 5 HOH A 5 505 70 HOH HOH . E 5 HOH A 6 506 210 HOH HOH . E 5 HOH A 7 507 289 HOH HOH . E 5 HOH A 8 508 254 HOH HOH . E 5 HOH A 9 509 114 HOH HOH . E 5 HOH A 10 510 331 HOH HOH . E 5 HOH A 11 511 328 HOH HOH . E 5 HOH A 12 512 199 HOH HOH . E 5 HOH A 13 513 140 HOH HOH . E 5 HOH A 14 514 192 HOH HOH . E 5 HOH A 15 515 66 HOH HOH . E 5 HOH A 16 516 241 HOH HOH . E 5 HOH A 17 517 82 HOH HOH . E 5 HOH A 18 518 255 HOH HOH . E 5 HOH A 19 519 243 HOH HOH . E 5 HOH A 20 520 115 HOH HOH . E 5 HOH A 21 521 56 HOH HOH . E 5 HOH A 22 522 193 HOH HOH . E 5 HOH A 23 523 4 HOH HOH . E 5 HOH A 24 524 11 HOH HOH . E 5 HOH A 25 525 305 HOH HOH . E 5 HOH A 26 526 219 HOH HOH . E 5 HOH A 27 527 40 HOH HOH . E 5 HOH A 28 528 218 HOH HOH . E 5 HOH A 29 529 195 HOH HOH . E 5 HOH A 30 530 244 HOH HOH . E 5 HOH A 31 531 188 HOH HOH . E 5 HOH A 32 532 220 HOH HOH . E 5 HOH A 33 533 38 HOH HOH . E 5 HOH A 34 534 177 HOH HOH . E 5 HOH A 35 535 135 HOH HOH . E 5 HOH A 36 536 197 HOH HOH . E 5 HOH A 37 537 119 HOH HOH . E 5 HOH A 38 538 61 HOH HOH . E 5 HOH A 39 539 208 HOH HOH . E 5 HOH A 40 540 47 HOH HOH . E 5 HOH A 41 541 89 HOH HOH . E 5 HOH A 42 542 322 HOH HOH . E 5 HOH A 43 543 149 HOH HOH . E 5 HOH A 44 544 103 HOH HOH . E 5 HOH A 45 545 24 HOH HOH . E 5 HOH A 46 546 125 HOH HOH . E 5 HOH A 47 547 105 HOH HOH . E 5 HOH A 48 548 18 HOH HOH . E 5 HOH A 49 549 287 HOH HOH . E 5 HOH A 50 550 34 HOH HOH . E 5 HOH A 51 551 12 HOH HOH . E 5 HOH A 52 552 91 HOH HOH . E 5 HOH A 53 553 187 HOH HOH . E 5 HOH A 54 554 95 HOH HOH . E 5 HOH A 55 555 293 HOH HOH . E 5 HOH A 56 556 8 HOH HOH . E 5 HOH A 57 557 304 HOH HOH . E 5 HOH A 58 558 211 HOH HOH . E 5 HOH A 59 559 165 HOH HOH . E 5 HOH A 60 560 228 HOH HOH . E 5 HOH A 61 561 107 HOH HOH . E 5 HOH A 62 562 144 HOH HOH . E 5 HOH A 63 563 36 HOH HOH . E 5 HOH A 64 564 109 HOH HOH . E 5 HOH A 65 565 9 HOH HOH . E 5 HOH A 66 566 59 HOH HOH . E 5 HOH A 67 567 164 HOH HOH . E 5 HOH A 68 568 58 HOH HOH . E 5 HOH A 69 569 240 HOH HOH . E 5 HOH A 70 570 158 HOH HOH . E 5 HOH A 71 571 160 HOH HOH . E 5 HOH A 72 572 131 HOH HOH . E 5 HOH A 73 573 97 HOH HOH . E 5 HOH A 74 574 27 HOH HOH . E 5 HOH A 75 575 182 HOH HOH . E 5 HOH A 76 576 13 HOH HOH . E 5 HOH A 77 577 81 HOH HOH . E 5 HOH A 78 578 118 HOH HOH . E 5 HOH A 79 579 213 HOH HOH . E 5 HOH A 80 580 288 HOH HOH . E 5 HOH A 81 581 41 HOH HOH . E 5 HOH A 82 582 106 HOH HOH . E 5 HOH A 83 583 122 HOH HOH . E 5 HOH A 84 584 126 HOH HOH . E 5 HOH A 85 585 35 HOH HOH . E 5 HOH A 86 586 138 HOH HOH . E 5 HOH A 87 587 15 HOH HOH . E 5 HOH A 88 588 37 HOH HOH . E 5 HOH A 89 589 186 HOH HOH . E 5 HOH A 90 590 5 HOH HOH . E 5 HOH A 91 591 175 HOH HOH . E 5 HOH A 92 592 146 HOH HOH . E 5 HOH A 93 593 298 HOH HOH . E 5 HOH A 94 594 73 HOH HOH . E 5 HOH A 95 595 245 HOH HOH . E 5 HOH A 96 596 311 HOH HOH . E 5 HOH A 97 597 235 HOH HOH . E 5 HOH A 98 598 84 HOH HOH . E 5 HOH A 99 599 185 HOH HOH . E 5 HOH A 100 600 221 HOH HOH . E 5 HOH A 101 601 43 HOH HOH . E 5 HOH A 102 602 317 HOH HOH . E 5 HOH A 103 603 130 HOH HOH . E 5 HOH A 104 604 3 HOH HOH . E 5 HOH A 105 605 51 HOH HOH . E 5 HOH A 106 606 45 HOH HOH . E 5 HOH A 107 607 314 HOH HOH . E 5 HOH A 108 608 93 HOH HOH . E 5 HOH A 109 609 26 HOH HOH . E 5 HOH A 110 610 2 HOH HOH . E 5 HOH A 111 611 342 HOH HOH . E 5 HOH A 112 612 14 HOH HOH . E 5 HOH A 113 613 236 HOH HOH . E 5 HOH A 114 614 63 HOH HOH . E 5 HOH A 115 615 184 HOH HOH . E 5 HOH A 116 616 247 HOH HOH . E 5 HOH A 117 617 296 HOH HOH . E 5 HOH A 118 618 57 HOH HOH . E 5 HOH A 119 619 154 HOH HOH . E 5 HOH A 120 620 143 HOH HOH . E 5 HOH A 121 621 60 HOH HOH . E 5 HOH A 122 622 196 HOH HOH . E 5 HOH A 123 623 85 HOH HOH . E 5 HOH A 124 624 222 HOH HOH . E 5 HOH A 125 625 28 HOH HOH . E 5 HOH A 126 626 33 HOH HOH . E 5 HOH A 127 627 49 HOH HOH . E 5 HOH A 128 628 137 HOH HOH . E 5 HOH A 129 629 163 HOH HOH . E 5 HOH A 130 630 233 HOH HOH . E 5 HOH A 131 631 6 HOH HOH . E 5 HOH A 132 632 68 HOH HOH . E 5 HOH A 133 633 332 HOH HOH . E 5 HOH A 134 634 250 HOH HOH . E 5 HOH A 135 635 141 HOH HOH . E 5 HOH A 136 636 96 HOH HOH . E 5 HOH A 137 637 104 HOH HOH . E 5 HOH A 138 638 44 HOH HOH . E 5 HOH A 139 639 94 HOH HOH . E 5 HOH A 140 640 7 HOH HOH . E 5 HOH A 141 641 225 HOH HOH . E 5 HOH A 142 642 174 HOH HOH . E 5 HOH A 143 643 117 HOH HOH . E 5 HOH A 144 644 274 HOH HOH . E 5 HOH A 145 645 310 HOH HOH . E 5 HOH A 146 646 284 HOH HOH . E 5 HOH A 147 647 71 HOH HOH . E 5 HOH A 148 648 260 HOH HOH . E 5 HOH A 149 649 72 HOH HOH . E 5 HOH A 150 650 52 HOH HOH . E 5 HOH A 151 651 169 HOH HOH . E 5 HOH A 152 652 65 HOH HOH . E 5 HOH A 153 653 203 HOH HOH . E 5 HOH A 154 654 162 HOH HOH . E 5 HOH A 155 655 86 HOH HOH . E 5 HOH A 156 656 87 HOH HOH . E 5 HOH A 157 657 77 HOH HOH . E 5 HOH A 158 658 200 HOH HOH . E 5 HOH A 159 659 54 HOH HOH . E 5 HOH A 160 660 180 HOH HOH . E 5 HOH A 161 661 48 HOH HOH . E 5 HOH A 162 662 20 HOH HOH . E 5 HOH A 163 663 204 HOH HOH . E 5 HOH A 164 664 325 HOH HOH . E 5 HOH A 165 665 316 HOH HOH . E 5 HOH A 166 666 19 HOH HOH . E 5 HOH A 167 667 10 HOH HOH . E 5 HOH A 168 668 25 HOH HOH . E 5 HOH A 169 669 136 HOH HOH . E 5 HOH A 170 670 98 HOH HOH . E 5 HOH A 171 671 55 HOH HOH . E 5 HOH A 172 672 157 HOH HOH . E 5 HOH A 173 673 21 HOH HOH . E 5 HOH A 174 674 173 HOH HOH . E 5 HOH A 175 675 46 HOH HOH . E 5 HOH A 176 676 153 HOH HOH . E 5 HOH A 177 677 258 HOH HOH . E 5 HOH A 178 678 152 HOH HOH . E 5 HOH A 179 679 128 HOH HOH . E 5 HOH A 180 680 78 HOH HOH . E 5 HOH A 181 681 79 HOH HOH . E 5 HOH A 182 682 32 HOH HOH . E 5 HOH A 183 683 108 HOH HOH . E 5 HOH A 184 684 335 HOH HOH . E 5 HOH A 185 685 100 HOH HOH . E 5 HOH A 186 686 76 HOH HOH . E 5 HOH A 187 687 1 HOH HOH . E 5 HOH A 188 688 88 HOH HOH . E 5 HOH A 189 689 30 HOH HOH . E 5 HOH A 190 690 127 HOH HOH . E 5 HOH A 191 691 297 HOH HOH . E 5 HOH A 192 692 246 HOH HOH . E 5 HOH A 193 693 214 HOH HOH . E 5 HOH A 194 694 280 HOH HOH . E 5 HOH A 195 695 67 HOH HOH . E 5 HOH A 196 696 205 HOH HOH . E 5 HOH A 197 697 53 HOH HOH . E 5 HOH A 198 698 111 HOH HOH . E 5 HOH A 199 699 191 HOH HOH . E 5 HOH A 200 700 156 HOH HOH . E 5 HOH A 201 701 166 HOH HOH . E 5 HOH A 202 702 230 HOH HOH . E 5 HOH A 203 703 29 HOH HOH . E 5 HOH A 204 704 90 HOH HOH . E 5 HOH A 205 705 299 HOH HOH . E 5 HOH A 206 706 295 HOH HOH . E 5 HOH A 207 707 74 HOH HOH . E 5 HOH A 208 708 121 HOH HOH . E 5 HOH A 209 709 290 HOH HOH . E 5 HOH A 210 710 224 HOH HOH . E 5 HOH A 211 711 39 HOH HOH . E 5 HOH A 212 712 113 HOH HOH . E 5 HOH A 213 713 120 HOH HOH . E 5 HOH A 214 714 312 HOH HOH . E 5 HOH A 215 715 336 HOH HOH . E 5 HOH A 216 716 133 HOH HOH . E 5 HOH A 217 717 261 HOH HOH . E 5 HOH A 218 718 31 HOH HOH . E 5 HOH A 219 719 102 HOH HOH . E 5 HOH A 220 720 285 HOH HOH . E 5 HOH A 221 721 231 HOH HOH . E 5 HOH A 222 722 139 HOH HOH . E 5 HOH A 223 723 159 HOH HOH . E 5 HOH A 224 724 209 HOH HOH . E 5 HOH A 225 725 17 HOH HOH . E 5 HOH A 226 726 267 HOH HOH . E 5 HOH A 227 727 16 HOH HOH . E 5 HOH A 228 728 170 HOH HOH . E 5 HOH A 229 729 83 HOH HOH . E 5 HOH A 230 730 145 HOH HOH . E 5 HOH A 231 731 22 HOH HOH . E 5 HOH A 232 732 206 HOH HOH . E 5 HOH A 233 733 110 HOH HOH . E 5 HOH A 234 734 75 HOH HOH . E 5 HOH A 235 735 155 HOH HOH . E 5 HOH A 236 736 129 HOH HOH . E 5 HOH A 237 737 216 HOH HOH . E 5 HOH A 238 738 50 HOH HOH . E 5 HOH A 239 739 142 HOH HOH . E 5 HOH A 240 740 101 HOH HOH . E 5 HOH A 241 741 42 HOH HOH . E 5 HOH A 242 742 321 HOH HOH . E 5 HOH A 243 743 190 HOH HOH . E 5 HOH A 244 744 80 HOH HOH . E 5 HOH A 245 745 282 HOH HOH . E 5 HOH A 246 746 92 HOH HOH . E 5 HOH A 247 747 346 HOH HOH . E 5 HOH A 248 748 99 HOH HOH . E 5 HOH A 249 749 194 HOH HOH . E 5 HOH A 250 750 256 HOH HOH . E 5 HOH A 251 751 201 HOH HOH . E 5 HOH A 252 752 171 HOH HOH . E 5 HOH A 253 753 283 HOH HOH . E 5 HOH A 254 754 252 HOH HOH . E 5 HOH A 255 755 64 HOH HOH . E 5 HOH A 256 756 181 HOH HOH . E 5 HOH A 257 757 307 HOH HOH . E 5 HOH A 258 758 251 HOH HOH . E 5 HOH A 259 759 232 HOH HOH . E 5 HOH A 260 760 134 HOH HOH . E 5 HOH A 261 761 69 HOH HOH . E 5 HOH A 262 762 294 HOH HOH . E 5 HOH A 263 763 207 HOH HOH . E 5 HOH A 264 764 278 HOH HOH . E 5 HOH A 265 765 112 HOH HOH . E 5 HOH A 266 766 277 HOH HOH . E 5 HOH A 267 767 327 HOH HOH . E 5 HOH A 268 768 329 HOH HOH . E 5 HOH A 269 769 242 HOH HOH . E 5 HOH A 270 770 217 HOH HOH . E 5 HOH A 271 771 229 HOH HOH . E 5 HOH A 272 772 265 HOH HOH . E 5 HOH A 273 773 227 HOH HOH . E 5 HOH A 274 774 303 HOH HOH . E 5 HOH A 275 775 123 HOH HOH . E 5 HOH A 276 776 341 HOH HOH . E 5 HOH A 277 777 275 HOH HOH . E 5 HOH A 278 778 132 HOH HOH . E 5 HOH A 279 779 315 HOH HOH . E 5 HOH A 280 780 168 HOH HOH . E 5 HOH A 281 781 238 HOH HOH . E 5 HOH A 282 782 248 HOH HOH . E 5 HOH A 283 783 271 HOH HOH . E 5 HOH A 284 784 340 HOH HOH . E 5 HOH A 285 785 343 HOH HOH . E 5 HOH A 286 786 320 HOH HOH . E 5 HOH A 287 787 300 HOH HOH . E 5 HOH A 288 788 257 HOH HOH . E 5 HOH A 289 789 292 HOH HOH . E 5 HOH A 290 790 189 HOH HOH . E 5 HOH A 291 791 309 HOH HOH . E 5 HOH A 292 792 253 HOH HOH . E 5 HOH A 293 793 249 HOH HOH . E 5 HOH A 294 794 264 HOH HOH . E 5 HOH A 295 795 266 HOH HOH . E 5 HOH A 296 796 269 HOH HOH . E 5 HOH A 297 797 124 HOH HOH . E 5 HOH A 298 798 198 HOH HOH . E 5 HOH A 299 799 179 HOH HOH . E 5 HOH A 300 800 279 HOH HOH . E 5 HOH A 301 801 176 HOH HOH . E 5 HOH A 302 802 151 HOH HOH . E 5 HOH A 303 803 272 HOH HOH . E 5 HOH A 304 804 344 HOH HOH . E 5 HOH A 305 805 306 HOH HOH . E 5 HOH A 306 806 276 HOH HOH . E 5 HOH A 307 807 183 HOH HOH . E 5 HOH A 308 808 234 HOH HOH . E 5 HOH A 309 809 318 HOH HOH . E 5 HOH A 310 810 281 HOH HOH . E 5 HOH A 311 811 167 HOH HOH . E 5 HOH A 312 812 223 HOH HOH . E 5 HOH A 313 813 178 HOH HOH . E 5 HOH A 314 814 239 HOH HOH . E 5 HOH A 315 815 215 HOH HOH . E 5 HOH A 316 816 263 HOH HOH . E 5 HOH A 317 817 150 HOH HOH . E 5 HOH A 318 818 262 HOH HOH . E 5 HOH A 319 819 338 HOH HOH . E 5 HOH A 320 820 308 HOH HOH . E 5 HOH A 321 821 345 HOH HOH . E 5 HOH A 322 822 270 HOH HOH . E 5 HOH A 323 823 212 HOH HOH . E 5 HOH A 324 824 237 HOH HOH . E 5 HOH A 325 825 161 HOH HOH . E 5 HOH A 326 826 301 HOH HOH . E 5 HOH A 327 827 334 HOH HOH . E 5 HOH A 328 828 147 HOH HOH . E 5 HOH A 329 829 302 HOH HOH . E 5 HOH A 330 830 291 HOH HOH . E 5 HOH A 331 831 259 HOH HOH . E 5 HOH A 332 832 339 HOH HOH . E 5 HOH A 333 833 268 HOH HOH . E 5 HOH A 334 834 286 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 9.435 16.379 93.07 1 35 ? C1 EDO 402 A 1 HETATM 2 O O1 EDO . . . C 3 9.815 17.676 93.473 1 33.59 ? O1 EDO 402 A 1 HETATM 3 C C2 EDO . . . C 3 8.232 16.392 92.207 1 36.25 ? C2 EDO 402 A 1 HETATM 4 O O2 EDO . . . C 3 7.905 15.118 91.686 1 39.46 ? O2 EDO 402 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #