data_8QC1 # _model_server_result.job_id 4TX9DcnSlTVJzbLZBLyycA _model_server_result.datetime_utc '2024-10-12 00:20:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qc1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":611}' # _entry.id 8QC1 # _exptl.entry_id 8QC1 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QC1 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QC1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id M _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 197 M LEU 197 1_555 M CA CA . M CA 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc2 A O PRO 275 M PRO 275 1_555 M CA CA . M CA 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc3 M CA CA . M CA 611 1_555 R O HOH . M HOH 748 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc4 M CA CA . M CA 611 1_555 R O HOH . M HOH 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc5 M CA CA . M CA 611 1_555 R O HOH . M HOH 754 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.127 ? metalc ? metalc6 M CA CA . M CA 611 1_555 R O HOH . M HOH 766 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.012 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8QC1 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 3PH M 1 601 3 3PH 3PH . D 3 3PH M 1 602 7 3PH 3PH . E 3 3PH M 1 603 8 3PH 3PH . F 4 3PE M 1 604 9 3PE 3PE . G 3 3PH M 1 605 10 3PH 3PH . H 4 3PE M 1 606 22 3PE 3PE . I 4 3PE M 1 607 23 3PE 3PE . J 5 CDL M 1 608 24 CDL CDL . K 3 3PH M 1 609 26 3PH 3PH . L 3 3PH M 1 610 27 3PH 3PH . M 6 CA M 1 611 4 CA CA . N 3 3PH L 1 801 4 3PH 3PH . O 7 P5S L 1 802 5 P5S P5S . P 4 3PE L 1 803 6 3PE 3PE . Q 3 3PH L 1 804 25 3PH 3PH . R 8 HOH M 1 701 1226 HOH HOH . R 8 HOH M 2 702 1213 HOH HOH . R 8 HOH M 3 703 602 HOH HOH . R 8 HOH M 4 704 1224 HOH HOH . R 8 HOH M 5 705 1041 HOH HOH . R 8 HOH M 6 706 1151 HOH HOH . R 8 HOH M 7 707 1221 HOH HOH . R 8 HOH M 8 708 974 HOH HOH . R 8 HOH M 9 709 593 HOH HOH . R 8 HOH M 10 710 1243 HOH HOH . R 8 HOH M 11 711 501 HOH HOH . R 8 HOH M 12 712 970 HOH HOH . R 8 HOH M 13 713 1223 HOH HOH . R 8 HOH M 14 714 972 HOH HOH . R 8 HOH M 15 715 497 HOH HOH . R 8 HOH M 16 716 208 HOH HOH . R 8 HOH M 17 717 598 HOH HOH . R 8 HOH M 18 718 220 HOH HOH . R 8 HOH M 19 719 924 HOH HOH . R 8 HOH M 20 720 971 HOH HOH . R 8 HOH M 21 721 1214 HOH HOH . R 8 HOH M 22 722 461 HOH HOH . R 8 HOH M 23 723 765 HOH HOH . R 8 HOH M 24 724 973 HOH HOH . R 8 HOH M 25 725 197 HOH HOH . R 8 HOH M 26 726 1222 HOH HOH . R 8 HOH M 27 727 375 HOH HOH . R 8 HOH M 28 728 1161 HOH HOH . R 8 HOH M 29 729 246 HOH HOH . R 8 HOH M 30 730 969 HOH HOH . R 8 HOH M 31 731 298 HOH HOH . R 8 HOH M 32 732 939 HOH HOH . R 8 HOH M 33 733 643 HOH HOH . R 8 HOH M 34 734 1227 HOH HOH . R 8 HOH M 35 735 289 HOH HOH . R 8 HOH M 36 736 968 HOH HOH . R 8 HOH M 37 737 1211 HOH HOH . R 8 HOH M 38 738 349 HOH HOH . R 8 HOH M 39 739 976 HOH HOH . R 8 HOH M 40 740 489 HOH HOH . R 8 HOH M 41 741 1228 HOH HOH . R 8 HOH M 42 742 599 HOH HOH . R 8 HOH M 43 743 1092 HOH HOH . R 8 HOH M 44 744 567 HOH HOH . R 8 HOH M 45 745 591 HOH HOH . R 8 HOH M 46 746 1216 HOH HOH . R 8 HOH M 47 747 618 HOH HOH . R 8 HOH M 48 748 1244 HOH HOH . R 8 HOH M 49 749 1220 HOH HOH . R 8 HOH M 50 750 1217 HOH HOH . R 8 HOH M 51 751 1178 HOH HOH . R 8 HOH M 52 752 188 HOH HOH . R 8 HOH M 53 753 364 HOH HOH . R 8 HOH M 54 754 1219 HOH HOH . R 8 HOH M 55 755 651 HOH HOH . R 8 HOH M 56 756 1225 HOH HOH . R 8 HOH M 57 757 335 HOH HOH . R 8 HOH M 58 758 1095 HOH HOH . R 8 HOH M 59 759 160 HOH HOH . R 8 HOH M 60 760 938 HOH HOH . R 8 HOH M 61 761 1210 HOH HOH . R 8 HOH M 62 762 393 HOH HOH . R 8 HOH M 63 763 637 HOH HOH . R 8 HOH M 64 764 472 HOH HOH . R 8 HOH M 65 765 377 HOH HOH . R 8 HOH M 66 766 1218 HOH HOH . R 8 HOH M 67 767 1160 HOH HOH . S 8 HOH L 1 901 1039 HOH HOH . S 8 HOH L 2 902 1204 HOH HOH . S 8 HOH L 3 903 1238 HOH HOH . S 8 HOH L 4 904 1196 HOH HOH . S 8 HOH L 5 905 1232 HOH HOH . S 8 HOH L 6 906 781 HOH HOH . S 8 HOH L 7 907 1229 HOH HOH . S 8 HOH L 8 908 1195 HOH HOH . S 8 HOH L 9 909 1179 HOH HOH . S 8 HOH L 10 910 1187 HOH HOH . S 8 HOH L 11 911 1239 HOH HOH . S 8 HOH L 12 912 1191 HOH HOH . S 8 HOH L 13 913 1234 HOH HOH . S 8 HOH L 14 914 1233 HOH HOH . S 8 HOH L 15 915 1186 HOH HOH . S 8 HOH L 16 916 1242 HOH HOH . S 8 HOH L 17 917 1230 HOH HOH . S 8 HOH L 18 918 1198 HOH HOH . S 8 HOH L 19 919 1199 HOH HOH . S 8 HOH L 20 920 603 HOH HOH . S 8 HOH L 21 921 1237 HOH HOH . S 8 HOH L 22 922 984 HOH HOH . S 8 HOH L 23 923 446 HOH HOH . S 8 HOH L 24 924 1241 HOH HOH . S 8 HOH L 25 925 1089 HOH HOH . S 8 HOH L 26 926 1235 HOH HOH . S 8 HOH L 27 927 1090 HOH HOH . S 8 HOH L 28 928 149 HOH HOH . S 8 HOH L 29 929 1200 HOH HOH . S 8 HOH L 30 930 1203 HOH HOH . S 8 HOH L 31 931 1197 HOH HOH . S 8 HOH L 32 932 1207 HOH HOH . S 8 HOH L 33 933 1091 HOH HOH . S 8 HOH L 34 934 654 HOH HOH . S 8 HOH L 35 935 649 HOH HOH . S 8 HOH L 36 936 1202 HOH HOH . S 8 HOH L 37 937 1163 HOH HOH . S 8 HOH L 38 938 1240 HOH HOH . S 8 HOH L 39 939 983 HOH HOH . S 8 HOH L 40 940 1208 HOH HOH . S 8 HOH L 41 941 1209 HOH HOH . S 8 HOH L 42 942 1206 HOH HOH . S 8 HOH L 43 943 1205 HOH HOH . S 8 HOH L 44 944 1201 HOH HOH . S 8 HOH L 45 945 159 HOH HOH . S 8 HOH L 46 946 1164 HOH HOH . S 8 HOH L 47 947 1236 HOH HOH . S 8 HOH L 48 948 1194 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 6 _atom_site.Cartn_x 219.435 _atom_site.Cartn_y 239.574 _atom_site.Cartn_z 165.268 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 75.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 611 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 533 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #