data_8QCC # _model_server_result.job_id 4F1MgqpCpb5AKnzMivtYOw _model_server_result.datetime_utc '2024-12-03 04:49:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qcc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":305}' # _entry.id 8QCC # _exptl.entry_id 8QCC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.69 _cell.angle_gamma 90 _cell.entry_id 8QCC _cell.length_a 142.57 _cell.length_b 52.793 _cell.length_c 90.253 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QCC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,L 1 1 B,G,H,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 I N N ? 4 J N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 108 A SER 108 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? metalc ? metalc2 A OD1 ASP 141 A ASP 141 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc3 C O1A ADP . A ADP 301 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc4 B OG SER 108 B SER 108 1_555 I MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc5 B O GLU 158 B GLU 158 1_555 K MG MG . B MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc6 G O1B ADP . B ADP 301 1_555 I MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc7 G O2A ADP . B ADP 301 1_555 I MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc8 K MG MG . B MG 305 1_555 M O HOH . B HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8QCC _atom_sites.fract_transf_matrix[1][1] 0.007014 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005226 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018942 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013817 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 301 302 ADP ADP . D 3 UKO A 1 302 303 UKO LIG . E 4 MG A 1 303 1 MG MG . F 4 MG A 1 304 4 MG MG . G 2 ADP B 1 301 302 ADP ADP . H 3 UKO B 1 302 303 UKO LIG . I 4 MG B 1 303 2 MG MG . J 4 MG B 1 304 3 MG MG . K 4 MG B 1 305 5 MG MG . L 5 HOH A 1 401 42 HOH HOH . L 5 HOH A 2 402 85 HOH HOH . L 5 HOH A 3 403 24 HOH HOH . L 5 HOH A 4 404 86 HOH HOH . L 5 HOH A 5 405 200 HOH HOH . L 5 HOH A 6 406 102 HOH HOH . L 5 HOH A 7 407 65 HOH HOH . L 5 HOH A 8 408 117 HOH HOH . L 5 HOH A 9 409 27 HOH HOH . L 5 HOH A 10 410 18 HOH HOH . L 5 HOH A 11 411 62 HOH HOH . L 5 HOH A 12 412 50 HOH HOH . L 5 HOH A 13 413 173 HOH HOH . L 5 HOH A 14 414 169 HOH HOH . L 5 HOH A 15 415 110 HOH HOH . L 5 HOH A 16 416 191 HOH HOH . L 5 HOH A 17 417 36 HOH HOH . L 5 HOH A 18 418 187 HOH HOH . L 5 HOH A 19 419 22 HOH HOH . L 5 HOH A 20 420 71 HOH HOH . L 5 HOH A 21 421 73 HOH HOH . L 5 HOH A 22 422 195 HOH HOH . L 5 HOH A 23 423 218 HOH HOH . L 5 HOH A 24 424 20 HOH HOH . L 5 HOH A 25 425 60 HOH HOH . L 5 HOH A 26 426 128 HOH HOH . L 5 HOH A 27 427 44 HOH HOH . L 5 HOH A 28 428 49 HOH HOH . L 5 HOH A 29 429 30 HOH HOH . L 5 HOH A 30 430 38 HOH HOH . L 5 HOH A 31 431 141 HOH HOH . L 5 HOH A 32 432 57 HOH HOH . L 5 HOH A 33 433 39 HOH HOH . L 5 HOH A 34 434 16 HOH HOH . L 5 HOH A 35 435 32 HOH HOH . L 5 HOH A 36 436 131 HOH HOH . L 5 HOH A 37 437 115 HOH HOH . L 5 HOH A 38 438 72 HOH HOH . L 5 HOH A 39 439 68 HOH HOH . L 5 HOH A 40 440 203 HOH HOH . L 5 HOH A 41 441 67 HOH HOH . L 5 HOH A 42 442 142 HOH HOH . L 5 HOH A 43 443 14 HOH HOH . L 5 HOH A 44 444 123 HOH HOH . L 5 HOH A 45 445 88 HOH HOH . L 5 HOH A 46 446 74 HOH HOH . L 5 HOH A 47 447 211 HOH HOH . L 5 HOH A 48 448 29 HOH HOH . L 5 HOH A 49 449 59 HOH HOH . L 5 HOH A 50 450 97 HOH HOH . L 5 HOH A 51 451 171 HOH HOH . L 5 HOH A 52 452 76 HOH HOH . L 5 HOH A 53 453 217 HOH HOH . L 5 HOH A 54 454 154 HOH HOH . L 5 HOH A 55 455 109 HOH HOH . L 5 HOH A 56 456 202 HOH HOH . L 5 HOH A 57 457 9 HOH HOH . L 5 HOH A 58 458 118 HOH HOH . L 5 HOH A 59 459 7 HOH HOH . L 5 HOH A 60 460 206 HOH HOH . L 5 HOH A 61 461 78 HOH HOH . L 5 HOH A 62 462 151 HOH HOH . L 5 HOH A 63 463 96 HOH HOH . L 5 HOH A 64 464 105 HOH HOH . L 5 HOH A 65 465 75 HOH HOH . L 5 HOH A 66 466 52 HOH HOH . L 5 HOH A 67 467 188 HOH HOH . L 5 HOH A 68 468 70 HOH HOH . L 5 HOH A 69 469 26 HOH HOH . L 5 HOH A 70 470 215 HOH HOH . L 5 HOH A 71 471 156 HOH HOH . L 5 HOH A 72 472 40 HOH HOH . L 5 HOH A 73 473 34 HOH HOH . L 5 HOH A 74 474 209 HOH HOH . L 5 HOH A 75 475 152 HOH HOH . L 5 HOH A 76 476 84 HOH HOH . L 5 HOH A 77 477 89 HOH HOH . L 5 HOH A 78 478 92 HOH HOH . L 5 HOH A 79 479 172 HOH HOH . L 5 HOH A 80 480 121 HOH HOH . L 5 HOH A 81 481 126 HOH HOH . L 5 HOH A 82 482 125 HOH HOH . L 5 HOH A 83 483 108 HOH HOH . L 5 HOH A 84 484 184 HOH HOH . L 5 HOH A 85 485 64 HOH HOH . L 5 HOH A 86 486 55 HOH HOH . L 5 HOH A 87 487 196 HOH HOH . L 5 HOH A 88 488 150 HOH HOH . L 5 HOH A 89 489 61 HOH HOH . L 5 HOH A 90 490 168 HOH HOH . L 5 HOH A 91 491 216 HOH HOH . L 5 HOH A 92 492 104 HOH HOH . L 5 HOH A 93 493 132 HOH HOH . L 5 HOH A 94 494 148 HOH HOH . L 5 HOH A 95 495 180 HOH HOH . L 5 HOH A 96 496 166 HOH HOH . L 5 HOH A 97 497 163 HOH HOH . L 5 HOH A 98 498 201 HOH HOH . L 5 HOH A 99 499 219 HOH HOH . L 5 HOH A 100 500 136 HOH HOH . L 5 HOH A 101 501 43 HOH HOH . L 5 HOH A 102 502 174 HOH HOH . L 5 HOH A 103 503 199 HOH HOH . M 5 HOH B 1 401 58 HOH HOH . M 5 HOH B 2 402 8 HOH HOH . M 5 HOH B 3 403 145 HOH HOH . M 5 HOH B 4 404 129 HOH HOH . M 5 HOH B 5 405 98 HOH HOH . M 5 HOH B 6 406 46 HOH HOH . M 5 HOH B 7 407 83 HOH HOH . M 5 HOH B 8 408 113 HOH HOH . M 5 HOH B 9 409 56 HOH HOH . M 5 HOH B 10 410 130 HOH HOH . M 5 HOH B 11 411 120 HOH HOH . M 5 HOH B 12 412 66 HOH HOH . M 5 HOH B 13 413 176 HOH HOH . M 5 HOH B 14 414 12 HOH HOH . M 5 HOH B 15 415 45 HOH HOH . M 5 HOH B 16 416 179 HOH HOH . M 5 HOH B 17 417 112 HOH HOH . M 5 HOH B 18 418 28 HOH HOH . M 5 HOH B 19 419 10 HOH HOH . M 5 HOH B 20 420 134 HOH HOH . M 5 HOH B 21 421 41 HOH HOH . M 5 HOH B 22 422 116 HOH HOH . M 5 HOH B 23 423 19 HOH HOH . M 5 HOH B 24 424 23 HOH HOH . M 5 HOH B 25 425 103 HOH HOH . M 5 HOH B 26 426 111 HOH HOH . M 5 HOH B 27 427 17 HOH HOH . M 5 HOH B 28 428 82 HOH HOH . M 5 HOH B 29 429 100 HOH HOH . M 5 HOH B 30 430 213 HOH HOH . M 5 HOH B 31 431 214 HOH HOH . M 5 HOH B 32 432 140 HOH HOH . M 5 HOH B 33 433 25 HOH HOH . M 5 HOH B 34 434 33 HOH HOH . M 5 HOH B 35 435 11 HOH HOH . M 5 HOH B 36 436 53 HOH HOH . M 5 HOH B 37 437 185 HOH HOH . M 5 HOH B 38 438 159 HOH HOH . M 5 HOH B 39 439 212 HOH HOH . M 5 HOH B 40 440 101 HOH HOH . M 5 HOH B 41 441 80 HOH HOH . M 5 HOH B 42 442 79 HOH HOH . M 5 HOH B 43 443 77 HOH HOH . M 5 HOH B 44 444 208 HOH HOH . M 5 HOH B 45 445 69 HOH HOH . M 5 HOH B 46 446 193 HOH HOH . M 5 HOH B 47 447 48 HOH HOH . M 5 HOH B 48 448 204 HOH HOH . M 5 HOH B 49 449 94 HOH HOH . M 5 HOH B 50 450 133 HOH HOH . M 5 HOH B 51 451 54 HOH HOH . M 5 HOH B 52 452 127 HOH HOH . M 5 HOH B 53 453 15 HOH HOH . M 5 HOH B 54 454 157 HOH HOH . M 5 HOH B 55 455 144 HOH HOH . M 5 HOH B 56 456 175 HOH HOH . M 5 HOH B 57 457 93 HOH HOH . M 5 HOH B 58 458 153 HOH HOH . M 5 HOH B 59 459 124 HOH HOH . M 5 HOH B 60 460 137 HOH HOH . M 5 HOH B 61 461 106 HOH HOH . M 5 HOH B 62 462 90 HOH HOH . M 5 HOH B 63 463 158 HOH HOH . M 5 HOH B 64 464 99 HOH HOH . M 5 HOH B 65 465 194 HOH HOH . M 5 HOH B 66 466 155 HOH HOH . M 5 HOH B 67 467 146 HOH HOH . M 5 HOH B 68 468 37 HOH HOH . M 5 HOH B 69 469 183 HOH HOH . M 5 HOH B 70 470 91 HOH HOH . M 5 HOH B 71 471 122 HOH HOH . M 5 HOH B 72 472 182 HOH HOH . M 5 HOH B 73 473 35 HOH HOH . M 5 HOH B 74 474 165 HOH HOH . M 5 HOH B 75 475 114 HOH HOH . M 5 HOH B 76 476 138 HOH HOH . M 5 HOH B 77 477 162 HOH HOH . M 5 HOH B 78 478 210 HOH HOH . M 5 HOH B 79 479 143 HOH HOH . M 5 HOH B 80 480 31 HOH HOH . M 5 HOH B 81 481 181 HOH HOH . M 5 HOH B 82 482 4 HOH HOH . M 5 HOH B 83 483 207 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 4 _atom_site.Cartn_x 53.518 _atom_site.Cartn_y 16.348 _atom_site.Cartn_z 9.475 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.55 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 305 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #