data_8QDE
#
_model_server_result.job_id            ftffaeAaBXnJRH671oWpJA 
_model_server_result.datetime_utc      '2024-11-15 03:30:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qde 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":402}' 
#
_entry.id    8QDE 
#
_exptl.entry_id    8QDE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              89.05 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OXAMIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8QDE 
_cell.length_a            71.53 
_cell.length_b            85.66 
_cell.length_c            207.1 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QDE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 L N N 
? 3 Q N N 
? 3 V N N 
#
_chem_comp.formula           'C2 H3 N O3' 
_chem_comp.formula_weight    89.05 
_chem_comp.id                OXM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OXAMIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 N1 OXM sing 314 n n 
C1 O1 OXM doub 315 n n 
C1 C2 OXM sing 316 n n 
N1 HN1 OXM sing 317 n n 
N1 HN2 OXM sing 318 n n 
C2 O2 OXM doub 319 n n 
C2 O3 OXM sing 320 n n 
O3 HO3 OXM sing 321 n n 
#
_atom_sites.entry_id                     8QDE 
_atom_sites.fract_transf_matrix[1][1]    0.01398 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011674 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004829 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAI A 1 401 1 NAI NAI . 
F 3 OXM A 1 402 1 OXM OXM . 
G 4 PGE A 1 403 1 PGE 3PE . 
H 5 SO4 A 1 404 4 SO4 SO4 . 
I 5 SO4 A 1 405 5 SO4 SO4 . 
J 5 SO4 A 1 406 7 SO4 SO4 . 
K 2 NAI B 1 401 2 NAI NAI . 
L 3 OXM B 1 402 2 OXM OXM . 
M 6 PEG B 1 403 1 PEG 2PE . 
N 4 PGE B 1 404 2 PGE 3PE . 
O 5 SO4 B 1 405 1 SO4 SO4 . 
P 2 NAI C 1 401 3 NAI NAI . 
Q 3 OXM C 1 402 3 OXM OXM . 
R 4 PGE C 1 403 3 PGE 3PE . 
S 5 SO4 C 1 404 3 SO4 SO4 . 
T 5 SO4 C 1 405 6 SO4 SO4 . 
U 2 NAI D 1 401 4 NAI NAI . 
V 3 OXM D 1 402 4 OXM OXM . 
W 5 SO4 D 1 403 2 SO4 SO4 . 
X 7 HOH A 1 501 28 HOH HOH . 
X 7 HOH A 2 502 232 HOH HOH . 
X 7 HOH A 3 503 70 HOH HOH . 
X 7 HOH A 4 504 140 HOH HOH . 
X 7 HOH A 5 505 105 HOH HOH . 
X 7 HOH A 6 506 280 HOH HOH . 
X 7 HOH A 7 507 231 HOH HOH . 
X 7 HOH A 8 508 268 HOH HOH . 
X 7 HOH A 9 509 204 HOH HOH . 
X 7 HOH A 10 510 75 HOH HOH . 
X 7 HOH A 11 511 138 HOH HOH . 
X 7 HOH A 12 512 124 HOH HOH . 
X 7 HOH A 13 513 247 HOH HOH . 
X 7 HOH A 14 514 205 HOH HOH . 
X 7 HOH A 15 515 86 HOH HOH . 
X 7 HOH A 16 516 272 HOH HOH . 
X 7 HOH A 17 517 257 HOH HOH . 
X 7 HOH A 18 518 63 HOH HOH . 
X 7 HOH A 19 519 267 HOH HOH . 
X 7 HOH A 20 520 78 HOH HOH . 
X 7 HOH A 21 521 155 HOH HOH . 
X 7 HOH A 22 522 271 HOH HOH . 
X 7 HOH A 23 523 260 HOH HOH . 
X 7 HOH A 24 524 202 HOH HOH . 
X 7 HOH A 25 525 27 HOH HOH . 
X 7 HOH A 26 526 203 HOH HOH . 
X 7 HOH A 27 527 277 HOH HOH . 
X 7 HOH A 28 528 259 HOH HOH . 
Y 7 HOH B 1 501 92 HOH HOH . 
Y 7 HOH B 2 502 166 HOH HOH . 
Y 7 HOH B 3 503 223 HOH HOH . 
Y 7 HOH B 4 504 4 HOH HOH . 
Y 7 HOH B 5 505 79 HOH HOH . 
Y 7 HOH B 6 506 289 HOH HOH . 
Y 7 HOH B 7 507 262 HOH HOH . 
Y 7 HOH B 8 508 31 HOH HOH . 
Y 7 HOH B 9 509 150 HOH HOH . 
Y 7 HOH B 10 510 149 HOH HOH . 
Y 7 HOH B 11 511 284 HOH HOH . 
Y 7 HOH B 12 512 248 HOH HOH . 
Y 7 HOH B 13 513 285 HOH HOH . 
Y 7 HOH B 14 514 17 HOH HOH . 
Y 7 HOH B 15 515 235 HOH HOH . 
Y 7 HOH B 16 516 16 HOH HOH . 
Y 7 HOH B 17 517 126 HOH HOH . 
Y 7 HOH B 18 518 174 HOH HOH . 
Y 7 HOH B 19 519 32 HOH HOH . 
Y 7 HOH B 20 520 30 HOH HOH . 
Y 7 HOH B 21 521 108 HOH HOH . 
Y 7 HOH B 22 522 62 HOH HOH . 
Y 7 HOH B 23 523 171 HOH HOH . 
Y 7 HOH B 24 524 255 HOH HOH . 
Y 7 HOH B 25 525 172 HOH HOH . 
Y 7 HOH B 26 526 23 HOH HOH . 
Y 7 HOH B 27 527 278 HOH HOH . 
Y 7 HOH B 28 528 250 HOH HOH . 
Y 7 HOH B 29 529 236 HOH HOH . 
Y 7 HOH B 30 530 237 HOH HOH . 
Y 7 HOH B 31 531 66 HOH HOH . 
Y 7 HOH B 32 532 251 HOH HOH . 
Y 7 HOH B 33 533 34 HOH HOH . 
Y 7 HOH B 34 534 288 HOH HOH . 
Y 7 HOH B 35 535 273 HOH HOH . 
Z 7 HOH C 1 501 274 HOH HOH . 
Z 7 HOH C 2 502 207 HOH HOH . 
Z 7 HOH C 3 503 129 HOH HOH . 
Z 7 HOH C 4 504 135 HOH HOH . 
Z 7 HOH C 5 505 42 HOH HOH . 
Z 7 HOH C 6 506 77 HOH HOH . 
Z 7 HOH C 7 507 228 HOH HOH . 
Z 7 HOH C 8 508 19 HOH HOH . 
Z 7 HOH C 9 509 194 HOH HOH . 
Z 7 HOH C 10 510 275 HOH HOH . 
Z 7 HOH C 11 511 276 HOH HOH . 
Z 7 HOH C 12 512 282 HOH HOH . 
Z 7 HOH C 13 513 263 HOH HOH . 
Z 7 HOH C 14 514 39 HOH HOH . 
Z 7 HOH C 15 515 283 HOH HOH . 
Z 7 HOH C 16 516 281 HOH HOH . 
Z 7 HOH C 17 517 181 HOH HOH . 
Z 7 HOH C 18 518 50 HOH HOH . 
Z 7 HOH C 19 519 198 HOH HOH . 
Z 7 HOH C 20 520 254 HOH HOH . 
Z 7 HOH C 21 521 290 HOH HOH . 
Z 7 HOH C 22 522 241 HOH HOH . 
Z 7 HOH C 23 523 142 HOH HOH . 
Z 7 HOH C 24 524 83 HOH HOH . 
Z 7 HOH C 25 525 143 HOH HOH . 
Z 7 HOH C 26 526 128 HOH HOH . 
Z 7 HOH C 27 527 195 HOH HOH . 
Z 7 HOH C 28 528 184 HOH HOH . 
Z 7 HOH C 29 529 157 HOH HOH . 
Z 7 HOH C 30 530 265 HOH HOH . 
Z 7 HOH C 31 531 243 HOH HOH . 
Z 7 HOH C 32 532 234 HOH HOH . 
AA 7 HOH D 1 501 40 HOH HOH . 
AA 7 HOH D 2 502 2 HOH HOH . 
AA 7 HOH D 3 503 233 HOH HOH . 
AA 7 HOH D 4 504 192 HOH HOH . 
AA 7 HOH D 5 505 287 HOH HOH . 
AA 7 HOH D 6 506 178 HOH HOH . 
AA 7 HOH D 7 507 61 HOH HOH . 
AA 7 HOH D 8 508 183 HOH HOH . 
AA 7 HOH D 9 509 107 HOH HOH . 
AA 7 HOH D 10 510 177 HOH HOH . 
AA 7 HOH D 11 511 7 HOH HOH . 
AA 7 HOH D 12 512 160 HOH HOH . 
AA 7 HOH D 13 513 161 HOH HOH . 
AA 7 HOH D 14 514 187 HOH HOH . 
AA 7 HOH D 15 515 65 HOH HOH . 
AA 7 HOH D 16 516 244 HOH HOH . 
AA 7 HOH D 17 517 58 HOH HOH . 
AA 7 HOH D 18 518 8 HOH HOH . 
AA 7 HOH D 19 519 99 HOH HOH . 
AA 7 HOH D 20 520 253 HOH HOH . 
AA 7 HOH D 21 521 220 HOH HOH . 
AA 7 HOH D 22 522 230 HOH HOH . 
AA 7 HOH D 23 523 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OXM . . . V 3 37.435 110.672 239.032 1 77.21 ? C1 OXM 402 D 1 
HETATM 2 N N1 OXM . . . V 3 37.875 112.038 239.254 1 71.94 ? N1 OXM 402 D 1 
HETATM 3 O O1 OXM . . . V 3 38.183 109.77 239.214 1 87.78 ? O1 OXM 402 D 1 
HETATM 4 C C2 OXM . . . V 3 36.008 110.397 238.561 1 64.56 ? C2 OXM 402 D 1 
HETATM 5 O O2 OXM . . . V 3 35.202 111.354 238.411 1 55.07 ? O2 OXM 402 D 1 
HETATM 6 O O3 OXM . . . V 3 35.638 109.216 238.323 1 64.69 ? O3 OXM 402 D 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#