data_8QDE # _model_server_result.job_id VmExyUtIpsCy1B_gp8j2hQ _model_server_result.datetime_utc '2024-11-15 03:47:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qde # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":404}' # _entry.id 8QDE # _exptl.entry_id 8QDE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QDE _cell.length_a 71.53 _cell.length_b 85.66 _cell.length_c 207.1 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QDE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 J N N ? 5 O N N ? 5 S N N ? 5 T N N ? 5 W N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 414 n n S O2 SO4 doub 415 n n S O3 SO4 sing 416 n n S O4 SO4 sing 417 n n # _atom_sites.entry_id 8QDE _atom_sites.fract_transf_matrix[1][1] 0.01398 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004829 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAI A 1 401 1 NAI NAI . F 3 OXM A 1 402 1 OXM OXM . G 4 PGE A 1 403 1 PGE 3PE . H 5 SO4 A 1 404 4 SO4 SO4 . I 5 SO4 A 1 405 5 SO4 SO4 . J 5 SO4 A 1 406 7 SO4 SO4 . K 2 NAI B 1 401 2 NAI NAI . L 3 OXM B 1 402 2 OXM OXM . M 6 PEG B 1 403 1 PEG 2PE . N 4 PGE B 1 404 2 PGE 3PE . O 5 SO4 B 1 405 1 SO4 SO4 . P 2 NAI C 1 401 3 NAI NAI . Q 3 OXM C 1 402 3 OXM OXM . R 4 PGE C 1 403 3 PGE 3PE . S 5 SO4 C 1 404 3 SO4 SO4 . T 5 SO4 C 1 405 6 SO4 SO4 . U 2 NAI D 1 401 4 NAI NAI . V 3 OXM D 1 402 4 OXM OXM . W 5 SO4 D 1 403 2 SO4 SO4 . X 7 HOH A 1 501 28 HOH HOH . X 7 HOH A 2 502 232 HOH HOH . X 7 HOH A 3 503 70 HOH HOH . X 7 HOH A 4 504 140 HOH HOH . X 7 HOH A 5 505 105 HOH HOH . X 7 HOH A 6 506 280 HOH HOH . X 7 HOH A 7 507 231 HOH HOH . X 7 HOH A 8 508 268 HOH HOH . X 7 HOH A 9 509 204 HOH HOH . X 7 HOH A 10 510 75 HOH HOH . X 7 HOH A 11 511 138 HOH HOH . X 7 HOH A 12 512 124 HOH HOH . X 7 HOH A 13 513 247 HOH HOH . X 7 HOH A 14 514 205 HOH HOH . X 7 HOH A 15 515 86 HOH HOH . X 7 HOH A 16 516 272 HOH HOH . X 7 HOH A 17 517 257 HOH HOH . X 7 HOH A 18 518 63 HOH HOH . X 7 HOH A 19 519 267 HOH HOH . X 7 HOH A 20 520 78 HOH HOH . X 7 HOH A 21 521 155 HOH HOH . X 7 HOH A 22 522 271 HOH HOH . X 7 HOH A 23 523 260 HOH HOH . X 7 HOH A 24 524 202 HOH HOH . X 7 HOH A 25 525 27 HOH HOH . X 7 HOH A 26 526 203 HOH HOH . X 7 HOH A 27 527 277 HOH HOH . X 7 HOH A 28 528 259 HOH HOH . Y 7 HOH B 1 501 92 HOH HOH . Y 7 HOH B 2 502 166 HOH HOH . Y 7 HOH B 3 503 223 HOH HOH . Y 7 HOH B 4 504 4 HOH HOH . Y 7 HOH B 5 505 79 HOH HOH . Y 7 HOH B 6 506 289 HOH HOH . Y 7 HOH B 7 507 262 HOH HOH . Y 7 HOH B 8 508 31 HOH HOH . Y 7 HOH B 9 509 150 HOH HOH . Y 7 HOH B 10 510 149 HOH HOH . Y 7 HOH B 11 511 284 HOH HOH . Y 7 HOH B 12 512 248 HOH HOH . Y 7 HOH B 13 513 285 HOH HOH . Y 7 HOH B 14 514 17 HOH HOH . Y 7 HOH B 15 515 235 HOH HOH . Y 7 HOH B 16 516 16 HOH HOH . Y 7 HOH B 17 517 126 HOH HOH . Y 7 HOH B 18 518 174 HOH HOH . Y 7 HOH B 19 519 32 HOH HOH . Y 7 HOH B 20 520 30 HOH HOH . Y 7 HOH B 21 521 108 HOH HOH . Y 7 HOH B 22 522 62 HOH HOH . Y 7 HOH B 23 523 171 HOH HOH . Y 7 HOH B 24 524 255 HOH HOH . Y 7 HOH B 25 525 172 HOH HOH . Y 7 HOH B 26 526 23 HOH HOH . Y 7 HOH B 27 527 278 HOH HOH . Y 7 HOH B 28 528 250 HOH HOH . Y 7 HOH B 29 529 236 HOH HOH . Y 7 HOH B 30 530 237 HOH HOH . Y 7 HOH B 31 531 66 HOH HOH . Y 7 HOH B 32 532 251 HOH HOH . Y 7 HOH B 33 533 34 HOH HOH . Y 7 HOH B 34 534 288 HOH HOH . Y 7 HOH B 35 535 273 HOH HOH . Z 7 HOH C 1 501 274 HOH HOH . Z 7 HOH C 2 502 207 HOH HOH . Z 7 HOH C 3 503 129 HOH HOH . Z 7 HOH C 4 504 135 HOH HOH . Z 7 HOH C 5 505 42 HOH HOH . Z 7 HOH C 6 506 77 HOH HOH . Z 7 HOH C 7 507 228 HOH HOH . Z 7 HOH C 8 508 19 HOH HOH . Z 7 HOH C 9 509 194 HOH HOH . Z 7 HOH C 10 510 275 HOH HOH . Z 7 HOH C 11 511 276 HOH HOH . Z 7 HOH C 12 512 282 HOH HOH . Z 7 HOH C 13 513 263 HOH HOH . Z 7 HOH C 14 514 39 HOH HOH . Z 7 HOH C 15 515 283 HOH HOH . Z 7 HOH C 16 516 281 HOH HOH . Z 7 HOH C 17 517 181 HOH HOH . Z 7 HOH C 18 518 50 HOH HOH . Z 7 HOH C 19 519 198 HOH HOH . Z 7 HOH C 20 520 254 HOH HOH . Z 7 HOH C 21 521 290 HOH HOH . Z 7 HOH C 22 522 241 HOH HOH . Z 7 HOH C 23 523 142 HOH HOH . Z 7 HOH C 24 524 83 HOH HOH . Z 7 HOH C 25 525 143 HOH HOH . Z 7 HOH C 26 526 128 HOH HOH . Z 7 HOH C 27 527 195 HOH HOH . Z 7 HOH C 28 528 184 HOH HOH . Z 7 HOH C 29 529 157 HOH HOH . Z 7 HOH C 30 530 265 HOH HOH . Z 7 HOH C 31 531 243 HOH HOH . Z 7 HOH C 32 532 234 HOH HOH . AA 7 HOH D 1 501 40 HOH HOH . AA 7 HOH D 2 502 2 HOH HOH . AA 7 HOH D 3 503 233 HOH HOH . AA 7 HOH D 4 504 192 HOH HOH . AA 7 HOH D 5 505 287 HOH HOH . AA 7 HOH D 6 506 178 HOH HOH . AA 7 HOH D 7 507 61 HOH HOH . AA 7 HOH D 8 508 183 HOH HOH . AA 7 HOH D 9 509 107 HOH HOH . AA 7 HOH D 10 510 177 HOH HOH . AA 7 HOH D 11 511 7 HOH HOH . AA 7 HOH D 12 512 160 HOH HOH . AA 7 HOH D 13 513 161 HOH HOH . AA 7 HOH D 14 514 187 HOH HOH . AA 7 HOH D 15 515 65 HOH HOH . AA 7 HOH D 16 516 244 HOH HOH . AA 7 HOH D 17 517 58 HOH HOH . AA 7 HOH D 18 518 8 HOH HOH . AA 7 HOH D 19 519 99 HOH HOH . AA 7 HOH D 20 520 253 HOH HOH . AA 7 HOH D 21 521 220 HOH HOH . AA 7 HOH D 22 522 230 HOH HOH . AA 7 HOH D 23 523 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . S 5 17.024 149.323 235.026 1 68.85 ? S SO4 404 C 1 HETATM 2 O O1 SO4 . . . S 5 16.242 150.162 234.123 1 59.38 ? O1 SO4 404 C 1 HETATM 3 O O2 SO4 . . . S 5 17.666 148.256 234.263 1 60.03 ? O2 SO4 404 C 1 HETATM 4 O O3 SO4 . . . S 5 16.144 148.739 236.035 1 82.32 ? O3 SO4 404 C 1 HETATM 5 O O4 SO4 . . . S 5 18.044 150.134 235.685 1 65.13 ? O4 SO4 404 C 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 630 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 5 #