data_8QIC # _model_server_result.job_id PzpEKAJ38nYWxn8S_FmxgA _model_server_result.datetime_utc '2024-10-16 23:33:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qic # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8QIC # _exptl.entry_id 8QIC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 383.418 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-oxidanyl-5-[[4-(phenylmethyl)phenyl]sulfamoyl]benzoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QIC _cell.length_a 85.78 _cell.length_b 110.5 _cell.length_c 113.97 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QIC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 92 A CYS 93 1_555 E ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc2 A NE2 HIS 143 A HIS 144 1_555 E ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc3 A ND1 HIS 269 A HIS 270 1_555 E ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc4 C O2 VL0 . A VL0 501 1_555 E ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc5 B SG CYS 92 D CYS 93 1_555 J ZN ZN . D ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc6 B NE2 HIS 143 D HIS 144 1_555 J ZN ZN . D ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc7 B ND1 HIS 269 D HIS 270 1_555 J ZN ZN . D ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc8 F O3 VL0 . D VL0 501 1_555 J ZN ZN . D ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? # _chem_comp.formula 'C20 H17 N O5 S' _chem_comp.formula_weight 383.418 _chem_comp.id VL0 _chem_comp.mon_nstd_flag . _chem_comp.name '2-oxidanyl-5-[[4-(phenylmethyl)phenyl]sulfamoyl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C1 VL0 doub 389 n n C1 O1 VL0 sing 390 n n C1 C2 VL0 sing 391 n n C19 C18 VL0 doub 392 n y C19 C20 VL0 sing 393 n y C18 C17 VL0 sing 394 n y O4 S1 VL0 doub 395 n n O5 S1 VL0 doub 396 n n C3 C2 VL0 doub 397 n y C3 C4 VL0 sing 398 n y C2 C7 VL0 sing 399 n y S1 C4 VL0 sing 400 n n S1 N1 VL0 sing 401 n n C20 C15 VL0 doub 402 n y C17 C16 VL0 doub 403 n y C4 C5 VL0 doub 404 n y C7 O3 VL0 sing 405 n n C7 C6 VL0 doub 406 n y C15 C16 VL0 sing 407 n y C15 C14 VL0 sing 408 n n N1 C8 VL0 sing 409 n n C13 C8 VL0 doub 410 n y C13 C12 VL0 sing 411 n y C5 C6 VL0 sing 412 n y C8 C9 VL0 sing 413 n y C12 C11 VL0 doub 414 n y C9 C10 VL0 doub 415 n y C11 C10 VL0 sing 416 n y C11 C14 VL0 sing 417 n n O1 H1 VL0 sing 418 n n C3 H2 VL0 sing 419 n n C5 H3 VL0 sing 420 n n C6 H4 VL0 sing 421 n n O3 H5 VL0 sing 422 n n N1 H6 VL0 sing 423 n n C9 H7 VL0 sing 424 n n C10 H8 VL0 sing 425 n n C12 H9 VL0 sing 426 n n C13 H10 VL0 sing 427 n n C14 H11 VL0 sing 428 n n C14 H12 VL0 sing 429 n n C16 H13 VL0 sing 430 n n C17 H14 VL0 sing 431 n n C18 H15 VL0 sing 432 n n C19 H16 VL0 sing 433 n n C20 H17 VL0 sing 434 n n # _atom_sites.entry_id 8QIC _atom_sites.fract_transf_matrix[1][1] 0.011658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00905 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008774 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VL0 A 1 501 502 VL0 00Z . D 3 GOL A 1 502 503 GOL GOL . E 4 ZN A 1 503 1 ZN ZN . F 2 VL0 D 1 501 501 VL0 01D . G 3 GOL D 1 502 502 GOL GOL . H 3 GOL D 1 503 503 GOL GOL . I 3 GOL D 1 504 504 GOL GOL . J 4 ZN D 1 505 2 ZN ZN . K 5 HOH A 1 601 43 HOH HOH . K 5 HOH A 2 602 10 HOH HOH . K 5 HOH A 3 603 45 HOH HOH . K 5 HOH A 4 604 28 HOH HOH . K 5 HOH A 5 605 44 HOH HOH . K 5 HOH A 6 606 3 HOH HOH . K 5 HOH A 7 607 39 HOH HOH . K 5 HOH A 8 608 35 HOH HOH . K 5 HOH A 9 609 24 HOH HOH . K 5 HOH A 10 610 5 HOH HOH . K 5 HOH A 11 611 6 HOH HOH . K 5 HOH A 12 612 4 HOH HOH . K 5 HOH A 13 613 1 HOH HOH . K 5 HOH A 14 614 18 HOH HOH . K 5 HOH A 15 615 13 HOH HOH . K 5 HOH A 16 616 42 HOH HOH . K 5 HOH A 17 617 23 HOH HOH . K 5 HOH A 18 618 15 HOH HOH . K 5 HOH A 19 619 47 HOH HOH . L 5 HOH D 1 601 14 HOH HOH . L 5 HOH D 2 602 32 HOH HOH . L 5 HOH D 3 603 48 HOH HOH . L 5 HOH D 4 604 38 HOH HOH . L 5 HOH D 5 605 2 HOH HOH . L 5 HOH D 6 606 8 HOH HOH . L 5 HOH D 7 607 26 HOH HOH . L 5 HOH D 8 608 46 HOH HOH . L 5 HOH D 9 609 34 HOH HOH . L 5 HOH D 10 610 36 HOH HOH . L 5 HOH D 11 611 21 HOH HOH . L 5 HOH D 12 612 37 HOH HOH . L 5 HOH D 13 613 9 HOH HOH . L 5 HOH D 14 614 31 HOH HOH . L 5 HOH D 15 615 12 HOH HOH . L 5 HOH D 16 616 29 HOH HOH . L 5 HOH D 17 617 40 HOH HOH . L 5 HOH D 18 618 41 HOH HOH . L 5 HOH D 19 619 49 HOH HOH . L 5 HOH D 20 620 33 HOH HOH . L 5 HOH D 21 621 7 HOH HOH . L 5 HOH D 22 622 27 HOH HOH . L 5 HOH D 23 623 20 HOH HOH . L 5 HOH D 24 624 16 HOH HOH . L 5 HOH D 25 625 25 HOH HOH . L 5 HOH D 26 626 30 HOH HOH . L 5 HOH D 27 627 11 HOH HOH . L 5 HOH D 28 628 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 VL0 . . . C 2 -7.125 -43.614 15.964 1 46.56 ? O1 VL0 501 A 1 HETATM 2 C C1 VL0 . . . C 2 -6.883 -42.686 15.152 1 40.7 ? C1 VL0 501 A 1 HETATM 3 O O2 VL0 . . . C 2 -6.373 -41.56 15.359 1 36.4 ? O2 VL0 501 A 1 HETATM 4 C C2 VL0 . . . C 2 -7.353 -42.92 13.771 1 45.74 ? C2 VL0 501 A 1 HETATM 5 C C3 VL0 . . . C 2 -8.068 -44.067 13.478 1 54.88 ? C3 VL0 501 A 1 HETATM 6 C C4 VL0 . . . C 2 -8.53 -44.284 12.209 1 32.01 ? C4 VL0 501 A 1 HETATM 7 C C5 VL0 . . . C 2 -8.339 -43.346 11.221 1 54.44 ? C5 VL0 501 A 1 HETATM 8 C C6 VL0 . . . C 2 -7.636 -42.197 11.504 1 65.94 ? C6 VL0 501 A 1 HETATM 9 C C7 VL0 . . . C 2 -7.128 -41.976 12.778 1 46.16 ? C7 VL0 501 A 1 HETATM 10 O O3 VL0 . . . C 2 -6.433 -40.845 13.059 1 40.06 ? O3 VL0 501 A 1 HETATM 11 S S1 VL0 . . . C 2 -9.419 -45.756 11.89 1 32.22 ? S1 VL0 501 A 1 HETATM 12 O O4 VL0 . . . C 2 -8.477 -46.799 11.639 1 23.84 ? O4 VL0 501 A 1 HETATM 13 O O5 VL0 . . . C 2 -10.357 -45.435 10.859 1 30.28 ? O5 VL0 501 A 1 HETATM 14 N N1 VL0 . . . C 2 -10.042 -46.208 13.358 1 34.01 ? N1 VL0 501 A 1 HETATM 15 C C8 VL0 . . . C 2 -11.393 -46.514 13.654 1 31.07 ? C8 VL0 501 A 1 HETATM 16 C C9 VL0 . . . C 2 -12.145 -45.379 13.515 1 39.36 ? C9 VL0 501 A 1 HETATM 17 C C10 VL0 . . . C 2 -13.505 -45.445 13.654 1 31.56 ? C10 VL0 501 A 1 HETATM 18 C C11 VL0 . . . C 2 -14.147 -46.637 13.898 1 35.98 ? C11 VL0 501 A 1 HETATM 19 C C12 VL0 . . . C 2 -13.388 -47.794 14.003 1 32.7 ? C12 VL0 501 A 1 HETATM 20 C C13 VL0 . . . C 2 -12.008 -47.736 13.888 1 37.78 ? C13 VL0 501 A 1 HETATM 21 C C14 VL0 . . . C 2 -15.651 -46.62 13.958 1 50.01 ? C14 VL0 501 A 1 HETATM 22 C C15 VL0 . . . C 2 -16.197 -46.296 12.58 1 25.43 ? C15 VL0 501 A 1 HETATM 23 C C16 VL0 . . . C 2 -15.342 -46.132 11.493 1 18.28 ? C16 VL0 501 A 1 HETATM 24 C C17 VL0 . . . C 2 -15.864 -45.898 10.226 1 25.88 ? C17 VL0 501 A 1 HETATM 25 C C18 VL0 . . . C 2 -17.249 -45.819 10.031 1 22.78 ? C18 VL0 501 A 1 HETATM 26 C C19 VL0 . . . C 2 -18.099 -45.977 11.113 1 19.73 ? C19 VL0 501 A 1 HETATM 27 C C20 VL0 . . . C 2 -17.571 -46.206 12.376 1 19.87 ? C20 VL0 501 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #