data_8QLF
#
_model_server_result.job_id            eB85_jV2dyjG5sQnHAIVTg 
_model_server_result.datetime_utc      '2024-11-16 17:53:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qlf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    8QLF 
#
_exptl.entry_id    8QLF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.547 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            EICOSANE 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8QLF 
_cell.length_a            53.382 
_cell.length_b            53.382 
_cell.length_c            364.842 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QLF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 245 A SER 245 1_555 A N LYR 246 A LYR 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale2 A C LYR 246 A LYR 246 1_555 A N LEU 247 A LEU 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
#
_chem_comp.formula           'C20 H42' 
_chem_comp.formula_weight    282.547 
_chem_comp.id                LFA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              EICOSANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'LIPID FRAGMENT' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 LFA sing 194 n n 
C1 H11 LFA sing 195 n n 
C1 H12 LFA sing 196 n n 
C1 H13 LFA sing 197 n n 
C2 C3 LFA sing 198 n n 
C2 H21 LFA sing 199 n n 
C2 H22 LFA sing 200 n n 
C3 C4 LFA sing 201 n n 
C3 H31 LFA sing 202 n n 
C3 H32 LFA sing 203 n n 
C4 C5 LFA sing 204 n n 
C4 H41 LFA sing 205 n n 
C4 H42 LFA sing 206 n n 
C5 C6 LFA sing 207 n n 
C5 H51 LFA sing 208 n n 
C5 H52 LFA sing 209 n n 
C6 C7 LFA sing 210 n n 
C6 H61 LFA sing 211 n n 
C6 H62 LFA sing 212 n n 
C7 C8 LFA sing 213 n n 
C7 H71 LFA sing 214 n n 
C7 H72 LFA sing 215 n n 
C8 C9 LFA sing 216 n n 
C8 H81 LFA sing 217 n n 
C8 H82 LFA sing 218 n n 
C9 C10 LFA sing 219 n n 
C9 H91 LFA sing 220 n n 
C9 H92 LFA sing 221 n n 
C10 C11 LFA sing 222 n n 
C10 H101 LFA sing 223 n n 
C10 H102 LFA sing 224 n n 
C11 C12 LFA sing 225 n n 
C11 H111 LFA sing 226 n n 
C11 H112 LFA sing 227 n n 
C12 C13 LFA sing 228 n n 
C12 H121 LFA sing 229 n n 
C12 H122 LFA sing 230 n n 
C13 C14 LFA sing 231 n n 
C13 H131 LFA sing 232 n n 
C13 H132 LFA sing 233 n n 
C14 C15 LFA sing 234 n n 
C14 H141 LFA sing 235 n n 
C14 H142 LFA sing 236 n n 
C15 C16 LFA sing 237 n n 
C15 H151 LFA sing 238 n n 
C15 H152 LFA sing 239 n n 
C16 C17 LFA sing 240 n n 
C16 H161 LFA sing 241 n n 
C16 H162 LFA sing 242 n n 
C17 C18 LFA sing 243 n n 
C17 H171 LFA sing 244 n n 
C17 H172 LFA sing 245 n n 
C18 C19 LFA sing 246 n n 
C18 H181 LFA sing 247 n n 
C18 H182 LFA sing 248 n n 
C19 C20 LFA sing 249 n n 
C19 H191 LFA sing 250 n n 
C19 H192 LFA sing 251 n n 
C20 H201 LFA sing 252 n n 
C20 H202 LFA sing 253 n n 
C20 H203 LFA sing 254 n n 
#
_atom_sites.entry_id                     8QLF 
_atom_sites.fract_transf_matrix[1][1]    0.018733 
_atom_sites.fract_transf_matrix[1][2]    0.010815 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021631 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002741 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 LFA A 1 401 401 LFA LFA . 
C 3 OLA A 1 402 601 OLA OLA . 
D 2 LFA A 1 403 603 LFA LFA . 
E 2 LFA A 1 404 605 LFA LFA . 
F 2 LFA A 1 405 607 LFA LFA . 
G 2 LFA A 1 406 608 LFA LFA . 
H 2 LFA A 1 407 609 LFA LFA . 
I 2 LFA A 1 408 611 LFA LFA . 
J 3 OLA A 1 409 613 OLA OLA . 
K 2 LFA A 1 410 2 LFA LFA . 
L 2 LFA A 1 411 3 LFA LFA . 
M 2 LFA A 1 412 4 LFA LFA . 
N 2 LFA A 1 413 5 LFA LFA . 
O 2 LFA A 1 414 6 LFA LFA . 
P 2 LFA A 1 415 7 LFA LFA . 
Q 2 LFA A 1 416 8 LFA LFA . 
R 2 LFA A 1 417 9 LFA LFA . 
S 2 LFA A 1 418 10 LFA LFA . 
T 4 HOH A 1 501 41 HOH HOH . 
T 4 HOH A 2 502 62 HOH HOH . 
T 4 HOH A 3 503 89 HOH HOH . 
T 4 HOH A 4 504 42 HOH HOH . 
T 4 HOH A 5 505 65 HOH HOH . 
T 4 HOH A 6 506 112 HOH HOH . 
T 4 HOH A 7 507 24 HOH HOH . 
T 4 HOH A 8 508 43 HOH HOH . 
T 4 HOH A 9 509 100 HOH HOH . 
T 4 HOH A 10 510 34 HOH HOH . 
T 4 HOH A 11 511 19 HOH HOH . 
T 4 HOH A 12 512 104 HOH HOH . 
T 4 HOH A 13 513 57 HOH HOH . 
T 4 HOH A 14 514 90 HOH HOH . 
T 4 HOH A 15 515 67 HOH HOH . 
T 4 HOH A 16 516 9 HOH HOH . 
T 4 HOH A 17 517 77 HOH HOH . 
T 4 HOH A 18 518 94 HOH HOH . 
T 4 HOH A 19 519 72 HOH HOH . 
T 4 HOH A 20 520 92 HOH HOH . 
T 4 HOH A 21 521 31 HOH HOH . 
T 4 HOH A 22 522 20 HOH HOH . 
T 4 HOH A 23 523 1 HOH HOH . 
T 4 HOH A 24 524 16 HOH HOH . 
T 4 HOH A 25 525 74 HOH HOH . 
T 4 HOH A 26 526 7 HOH HOH . 
T 4 HOH A 27 527 49 HOH HOH . 
T 4 HOH A 28 528 6 HOH HOH . 
T 4 HOH A 29 529 15 HOH HOH . 
T 4 HOH A 30 530 73 HOH HOH . 
T 4 HOH A 31 531 35 HOH HOH . 
T 4 HOH A 32 532 37 HOH HOH . 
T 4 HOH A 33 533 5 HOH HOH . 
T 4 HOH A 34 534 48 HOH HOH . 
T 4 HOH A 35 535 26 HOH HOH . 
T 4 HOH A 36 536 28 HOH HOH . 
T 4 HOH A 37 537 13 HOH HOH . 
T 4 HOH A 38 538 12 HOH HOH . 
T 4 HOH A 39 539 63 HOH HOH . 
T 4 HOH A 40 540 8 HOH HOH . 
T 4 HOH A 41 541 18 HOH HOH . 
T 4 HOH A 42 542 3 HOH HOH . 
T 4 HOH A 43 543 58 HOH HOH . 
T 4 HOH A 44 544 78 HOH HOH . 
T 4 HOH A 45 545 10 HOH HOH . 
T 4 HOH A 46 546 110 HOH HOH . 
T 4 HOH A 47 547 27 HOH HOH . 
T 4 HOH A 48 548 2 HOH HOH . 
T 4 HOH A 49 549 95 HOH HOH . 
T 4 HOH A 50 550 60 HOH HOH . 
T 4 HOH A 51 551 111 HOH HOH . 
T 4 HOH A 52 552 59 HOH HOH . 
T 4 HOH A 53 553 11 HOH HOH . 
T 4 HOH A 54 554 50 HOH HOH . 
T 4 HOH A 55 555 88 HOH HOH . 
T 4 HOH A 56 556 21 HOH HOH . 
T 4 HOH A 57 557 33 HOH HOH . 
T 4 HOH A 58 558 23 HOH HOH . 
T 4 HOH A 59 559 91 HOH HOH . 
T 4 HOH A 60 560 14 HOH HOH . 
T 4 HOH A 61 561 83 HOH HOH . 
T 4 HOH A 62 562 53 HOH HOH . 
T 4 HOH A 63 563 64 HOH HOH . 
T 4 HOH A 64 564 17 HOH HOH . 
T 4 HOH A 65 565 82 HOH HOH . 
T 4 HOH A 66 566 68 HOH HOH . 
T 4 HOH A 67 567 30 HOH HOH . 
T 4 HOH A 68 568 52 HOH HOH . 
T 4 HOH A 69 569 61 HOH HOH . 
T 4 HOH A 70 570 87 HOH HOH . 
T 4 HOH A 71 571 101 HOH HOH . 
T 4 HOH A 72 572 46 HOH HOH . 
T 4 HOH A 73 573 86 HOH HOH . 
T 4 HOH A 74 574 56 HOH HOH . 
T 4 HOH A 75 575 29 HOH HOH . 
T 4 HOH A 76 576 40 HOH HOH . 
T 4 HOH A 77 577 39 HOH HOH . 
T 4 HOH A 78 578 66 HOH HOH . 
T 4 HOH A 79 579 106 HOH HOH . 
T 4 HOH A 80 580 85 HOH HOH . 
T 4 HOH A 81 581 51 HOH HOH . 
T 4 HOH A 82 582 25 HOH HOH . 
T 4 HOH A 83 583 22 HOH HOH . 
T 4 HOH A 84 584 47 HOH HOH . 
T 4 HOH A 85 585 97 HOH HOH . 
T 4 HOH A 86 586 4 HOH HOH . 
T 4 HOH A 87 587 80 HOH HOH . 
T 4 HOH A 88 588 38 HOH HOH . 
T 4 HOH A 89 589 76 HOH HOH . 
T 4 HOH A 90 590 105 HOH HOH . 
T 4 HOH A 91 591 36 HOH HOH . 
T 4 HOH A 92 592 32 HOH HOH . 
T 4 HOH A 93 593 93 HOH HOH . 
T 4 HOH A 94 594 98 HOH HOH . 
T 4 HOH A 95 595 103 HOH HOH . 
T 4 HOH A 96 596 54 HOH HOH . 
T 4 HOH A 97 597 99 HOH HOH . 
T 4 HOH A 98 598 79 HOH HOH . 
T 4 HOH A 99 599 69 HOH HOH . 
T 4 HOH A 100 600 70 HOH HOH . 
T 4 HOH A 101 601 102 HOH HOH . 
T 4 HOH A 102 602 44 HOH HOH . 
T 4 HOH A 103 603 84 HOH HOH . 
T 4 HOH A 104 604 107 HOH HOH . 
T 4 HOH A 105 605 75 HOH HOH . 
T 4 HOH A 106 606 108 HOH HOH . 
T 4 HOH A 107 607 71 HOH HOH . 
T 4 HOH A 108 608 45 HOH HOH . 
T 4 HOH A 109 609 109 HOH HOH . 
T 4 HOH A 110 610 81 HOH HOH . 
T 4 HOH A 111 611 55 HOH HOH . 
T 4 HOH A 112 612 96 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LFA . . . B 2 -19.002 37.872 -17.32 1 61.01 ? C1 LFA 401 A 1 
HETATM 2 C C2 LFA . . . B 2 -19.881 37.498 -16.147 1 60.83 ? C2 LFA 401 A 1 
HETATM 3 C C3 LFA . . . B 2 -19.14 36.826 -15.018 1 57.67 ? C3 LFA 401 A 1 
HETATM 4 C C4 LFA . . . B 2 -20.02 36.108 -14.021 1 49.4 ? C4 LFA 401 A 1 
HETATM 5 C C5 LFA . . . B 2 -20.901 37.015 -13.187 1 52.47 ? C5 LFA 401 A 1 
HETATM 6 C C6 LFA . . . B 2 -20.95 36.647 -11.722 1 51.71 ? C6 LFA 401 A 1 
HETATM 7 C C7 LFA . . . B 2 -22.074 37.286 -10.939 1 46.09 ? C7 LFA 401 A 1 
HETATM 8 C C8 LFA . . . B 2 -22.669 36.388 -9.879 1 46.48 ? C8 LFA 401 A 1 
HETATM 9 C C9 LFA . . . B 2 -23.261 37.112 -8.694 1 41.42 ? C9 LFA 401 A 1 
HETATM 10 C C10 LFA . . . B 2 -23.827 36.201 -7.631 1 38.62 ? C10 LFA 401 A 1 
HETATM 11 C C11 LFA . . . B 2 -24.707 36.894 -6.614 1 41.72 ? C11 LFA 401 A 1 
HETATM 12 C C12 LFA . . . B 2 -24.927 36.113 -5.339 1 39.63 ? C12 LFA 401 A 1 
HETATM 13 C C13 LFA . . . B 2 -24.986 36.961 -4.089 1 39.92 ? C13 LFA 401 A 1 
HETATM 14 C C14 LFA . . . B 2 -23.758 36.877 -3.215 1 41.31 ? C14 LFA 401 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    41 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           14 
#