data_8QLT # _model_server_result.job_id VZ7ra9A7feEsAZxWo_NgFg _model_server_result.datetime_utc '2024-11-26 10:09:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qlt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8QLT # _exptl.entry_id 8QLT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.27 _cell.angle_gamma 90 _cell.entry_id 8QLT _cell.length_a 43.547 _cell.length_b 58.56 _cell.length_c 61.173 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QLT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8QLT _atom_sites.fract_transf_matrix[1][1] 0.022964 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007139 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017077 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017119 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VZ2 A 1 401 401 VZ2 M30 . C 3 EDO A 1 402 501 EDO EDO . D 3 EDO A 1 403 701 EDO EDO . E 3 EDO A 1 404 801 EDO EDO . F 4 HOH A 1 501 292 HOH HOH . F 4 HOH A 2 502 176 HOH HOH . F 4 HOH A 3 503 242 HOH HOH . F 4 HOH A 4 504 54 HOH HOH . F 4 HOH A 5 505 266 HOH HOH . F 4 HOH A 6 506 224 HOH HOH . F 4 HOH A 7 507 198 HOH HOH . F 4 HOH A 8 508 201 HOH HOH . F 4 HOH A 9 509 291 HOH HOH . F 4 HOH A 10 510 309 HOH HOH . F 4 HOH A 11 511 264 HOH HOH . F 4 HOH A 12 512 326 HOH HOH . F 4 HOH A 13 513 276 HOH HOH . F 4 HOH A 14 514 238 HOH HOH . F 4 HOH A 15 515 211 HOH HOH . F 4 HOH A 16 516 92 HOH HOH . F 4 HOH A 17 517 70 HOH HOH . F 4 HOH A 18 518 154 HOH HOH . F 4 HOH A 19 519 43 HOH HOH . F 4 HOH A 20 520 91 HOH HOH . F 4 HOH A 21 521 300 HOH HOH . F 4 HOH A 22 522 18 HOH HOH . F 4 HOH A 23 523 79 HOH HOH . F 4 HOH A 24 524 55 HOH HOH . F 4 HOH A 25 525 42 HOH HOH . F 4 HOH A 26 526 68 HOH HOH . F 4 HOH A 27 527 126 HOH HOH . F 4 HOH A 28 528 118 HOH HOH . F 4 HOH A 29 529 127 HOH HOH . F 4 HOH A 30 530 169 HOH HOH . F 4 HOH A 31 531 40 HOH HOH . F 4 HOH A 32 532 179 HOH HOH . F 4 HOH A 33 533 82 HOH HOH . F 4 HOH A 34 534 15 HOH HOH . F 4 HOH A 35 535 64 HOH HOH . F 4 HOH A 36 536 257 HOH HOH . F 4 HOH A 37 537 21 HOH HOH . F 4 HOH A 38 538 191 HOH HOH . F 4 HOH A 39 539 66 HOH HOH . F 4 HOH A 40 540 129 HOH HOH . F 4 HOH A 41 541 235 HOH HOH . F 4 HOH A 42 542 86 HOH HOH . F 4 HOH A 43 543 77 HOH HOH . F 4 HOH A 44 544 52 HOH HOH . F 4 HOH A 45 545 290 HOH HOH . F 4 HOH A 46 546 123 HOH HOH . F 4 HOH A 47 547 314 HOH HOH . F 4 HOH A 48 548 222 HOH HOH . F 4 HOH A 49 549 117 HOH HOH . F 4 HOH A 50 550 247 HOH HOH . F 4 HOH A 51 551 3 HOH HOH . F 4 HOH A 52 552 5 HOH HOH . F 4 HOH A 53 553 125 HOH HOH . F 4 HOH A 54 554 333 HOH HOH . F 4 HOH A 55 555 97 HOH HOH . F 4 HOH A 56 556 252 HOH HOH . F 4 HOH A 57 557 7 HOH HOH . F 4 HOH A 58 558 14 HOH HOH . F 4 HOH A 59 559 186 HOH HOH . F 4 HOH A 60 560 240 HOH HOH . F 4 HOH A 61 561 65 HOH HOH . F 4 HOH A 62 562 11 HOH HOH . F 4 HOH A 63 563 27 HOH HOH . F 4 HOH A 64 564 216 HOH HOH . F 4 HOH A 65 565 331 HOH HOH . F 4 HOH A 66 566 124 HOH HOH . F 4 HOH A 67 567 72 HOH HOH . F 4 HOH A 68 568 137 HOH HOH . F 4 HOH A 69 569 103 HOH HOH . F 4 HOH A 70 570 56 HOH HOH . F 4 HOH A 71 571 341 HOH HOH . F 4 HOH A 72 572 75 HOH HOH . F 4 HOH A 73 573 237 HOH HOH . F 4 HOH A 74 574 100 HOH HOH . F 4 HOH A 75 575 96 HOH HOH . F 4 HOH A 76 576 282 HOH HOH . F 4 HOH A 77 577 74 HOH HOH . F 4 HOH A 78 578 31 HOH HOH . F 4 HOH A 79 579 73 HOH HOH . F 4 HOH A 80 580 172 HOH HOH . F 4 HOH A 81 581 109 HOH HOH . F 4 HOH A 82 582 340 HOH HOH . F 4 HOH A 83 583 62 HOH HOH . F 4 HOH A 84 584 89 HOH HOH . F 4 HOH A 85 585 312 HOH HOH . F 4 HOH A 86 586 136 HOH HOH . F 4 HOH A 87 587 116 HOH HOH . F 4 HOH A 88 588 12 HOH HOH . F 4 HOH A 89 589 50 HOH HOH . F 4 HOH A 90 590 63 HOH HOH . F 4 HOH A 91 591 24 HOH HOH . F 4 HOH A 92 592 178 HOH HOH . F 4 HOH A 93 593 254 HOH HOH . F 4 HOH A 94 594 17 HOH HOH . F 4 HOH A 95 595 138 HOH HOH . F 4 HOH A 96 596 164 HOH HOH . F 4 HOH A 97 597 323 HOH HOH . F 4 HOH A 98 598 183 HOH HOH . F 4 HOH A 99 599 146 HOH HOH . F 4 HOH A 100 600 33 HOH HOH . F 4 HOH A 101 601 37 HOH HOH . F 4 HOH A 102 602 144 HOH HOH . F 4 HOH A 103 603 355 HOH HOH . F 4 HOH A 104 604 99 HOH HOH . F 4 HOH A 105 605 121 HOH HOH . F 4 HOH A 106 606 106 HOH HOH . F 4 HOH A 107 607 104 HOH HOH . F 4 HOH A 108 608 53 HOH HOH . F 4 HOH A 109 609 193 HOH HOH . F 4 HOH A 110 610 60 HOH HOH . F 4 HOH A 111 611 110 HOH HOH . F 4 HOH A 112 612 87 HOH HOH . F 4 HOH A 113 613 94 HOH HOH . F 4 HOH A 114 614 57 HOH HOH . F 4 HOH A 115 615 345 HOH HOH . F 4 HOH A 116 616 71 HOH HOH . F 4 HOH A 117 617 243 HOH HOH . F 4 HOH A 118 618 173 HOH HOH . F 4 HOH A 119 619 148 HOH HOH . F 4 HOH A 120 620 20 HOH HOH . F 4 HOH A 121 621 347 HOH HOH . F 4 HOH A 122 622 36 HOH HOH . F 4 HOH A 123 623 80 HOH HOH . F 4 HOH A 124 624 120 HOH HOH . F 4 HOH A 125 625 78 HOH HOH . F 4 HOH A 126 626 67 HOH HOH . F 4 HOH A 127 627 83 HOH HOH . F 4 HOH A 128 628 2 HOH HOH . F 4 HOH A 129 629 25 HOH HOH . F 4 HOH A 130 630 182 HOH HOH . F 4 HOH A 131 631 102 HOH HOH . F 4 HOH A 132 632 28 HOH HOH . F 4 HOH A 133 633 39 HOH HOH . F 4 HOH A 134 634 272 HOH HOH . F 4 HOH A 135 635 46 HOH HOH . F 4 HOH A 136 636 165 HOH HOH . F 4 HOH A 137 637 250 HOH HOH . F 4 HOH A 138 638 189 HOH HOH . F 4 HOH A 139 639 59 HOH HOH . F 4 HOH A 140 640 270 HOH HOH . F 4 HOH A 141 641 95 HOH HOH . F 4 HOH A 142 642 101 HOH HOH . F 4 HOH A 143 643 187 HOH HOH . F 4 HOH A 144 644 168 HOH HOH . F 4 HOH A 145 645 258 HOH HOH . F 4 HOH A 146 646 29 HOH HOH . F 4 HOH A 147 647 13 HOH HOH . F 4 HOH A 148 648 181 HOH HOH . F 4 HOH A 149 649 47 HOH HOH . F 4 HOH A 150 650 108 HOH HOH . F 4 HOH A 151 651 283 HOH HOH . F 4 HOH A 152 652 58 HOH HOH . F 4 HOH A 153 653 51 HOH HOH . F 4 HOH A 154 654 6 HOH HOH . F 4 HOH A 155 655 133 HOH HOH . F 4 HOH A 156 656 195 HOH HOH . F 4 HOH A 157 657 105 HOH HOH . F 4 HOH A 158 658 130 HOH HOH . F 4 HOH A 159 659 132 HOH HOH . F 4 HOH A 160 660 131 HOH HOH . F 4 HOH A 161 661 140 HOH HOH . F 4 HOH A 162 662 262 HOH HOH . F 4 HOH A 163 663 128 HOH HOH . F 4 HOH A 164 664 41 HOH HOH . F 4 HOH A 165 665 202 HOH HOH . F 4 HOH A 166 666 217 HOH HOH . F 4 HOH A 167 667 38 HOH HOH . F 4 HOH A 168 668 142 HOH HOH . F 4 HOH A 169 669 318 HOH HOH . F 4 HOH A 170 670 212 HOH HOH . F 4 HOH A 171 671 90 HOH HOH . F 4 HOH A 172 672 306 HOH HOH . F 4 HOH A 173 673 316 HOH HOH . F 4 HOH A 174 674 337 HOH HOH . F 4 HOH A 175 675 335 HOH HOH . F 4 HOH A 176 676 98 HOH HOH . F 4 HOH A 177 677 159 HOH HOH . F 4 HOH A 178 678 158 HOH HOH . F 4 HOH A 179 679 185 HOH HOH . F 4 HOH A 180 680 354 HOH HOH . F 4 HOH A 181 681 207 HOH HOH . F 4 HOH A 182 682 284 HOH HOH . F 4 HOH A 183 683 233 HOH HOH . F 4 HOH A 184 684 285 HOH HOH . F 4 HOH A 185 685 303 HOH HOH . F 4 HOH A 186 686 329 HOH HOH . F 4 HOH A 187 687 328 HOH HOH . F 4 HOH A 188 688 35 HOH HOH . F 4 HOH A 189 689 210 HOH HOH . F 4 HOH A 190 690 294 HOH HOH . F 4 HOH A 191 691 184 HOH HOH . F 4 HOH A 192 692 209 HOH HOH . F 4 HOH A 193 693 166 HOH HOH . F 4 HOH A 194 694 324 HOH HOH . F 4 HOH A 195 695 248 HOH HOH . F 4 HOH A 196 696 299 HOH HOH . F 4 HOH A 197 697 287 HOH HOH . F 4 HOH A 198 698 245 HOH HOH . F 4 HOH A 199 699 122 HOH HOH . F 4 HOH A 200 700 274 HOH HOH . F 4 HOH A 201 701 280 HOH HOH . F 4 HOH A 202 702 177 HOH HOH . F 4 HOH A 203 703 251 HOH HOH . F 4 HOH A 204 704 346 HOH HOH . F 4 HOH A 205 705 338 HOH HOH . F 4 HOH A 206 706 263 HOH HOH . F 4 HOH A 207 707 145 HOH HOH . F 4 HOH A 208 708 205 HOH HOH . F 4 HOH A 209 709 256 HOH HOH . F 4 HOH A 210 710 271 HOH HOH . F 4 HOH A 211 711 296 HOH HOH . F 4 HOH A 212 712 350 HOH HOH . F 4 HOH A 213 713 313 HOH HOH . F 4 HOH A 214 714 277 HOH HOH . F 4 HOH A 215 715 149 HOH HOH . F 4 HOH A 216 716 197 HOH HOH . F 4 HOH A 217 717 220 HOH HOH . F 4 HOH A 218 718 61 HOH HOH . F 4 HOH A 219 719 261 HOH HOH . F 4 HOH A 220 720 234 HOH HOH . F 4 HOH A 221 721 246 HOH HOH . F 4 HOH A 222 722 190 HOH HOH . F 4 HOH A 223 723 327 HOH HOH . F 4 HOH A 224 724 225 HOH HOH . F 4 HOH A 225 725 161 HOH HOH . F 4 HOH A 226 726 322 HOH HOH . F 4 HOH A 227 727 157 HOH HOH . F 4 HOH A 228 728 310 HOH HOH . F 4 HOH A 229 729 208 HOH HOH . F 4 HOH A 230 730 167 HOH HOH . F 4 HOH A 231 731 315 HOH HOH . F 4 HOH A 232 732 281 HOH HOH . F 4 HOH A 233 733 219 HOH HOH . F 4 HOH A 234 734 147 HOH HOH . F 4 HOH A 235 735 311 HOH HOH . F 4 HOH A 236 736 188 HOH HOH . F 4 HOH A 237 737 69 HOH HOH . F 4 HOH A 238 738 317 HOH HOH . F 4 HOH A 239 739 30 HOH HOH . F 4 HOH A 240 740 348 HOH HOH . F 4 HOH A 241 741 275 HOH HOH . F 4 HOH A 242 742 85 HOH HOH . F 4 HOH A 243 743 319 HOH HOH . F 4 HOH A 244 744 115 HOH HOH . F 4 HOH A 245 745 308 HOH HOH . F 4 HOH A 246 746 84 HOH HOH . F 4 HOH A 247 747 253 HOH HOH . F 4 HOH A 248 748 356 HOH HOH . F 4 HOH A 249 749 239 HOH HOH . F 4 HOH A 250 750 336 HOH HOH . F 4 HOH A 251 751 134 HOH HOH . F 4 HOH A 252 752 286 HOH HOH . F 4 HOH A 253 753 305 HOH HOH . F 4 HOH A 254 754 76 HOH HOH . F 4 HOH A 255 755 206 HOH HOH . F 4 HOH A 256 756 163 HOH HOH . F 4 HOH A 257 757 143 HOH HOH . F 4 HOH A 258 758 160 HOH HOH . F 4 HOH A 259 759 215 HOH HOH . F 4 HOH A 260 760 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 -20.481 -5.887 21.03 1 59.29 ? C1 EDO 402 A 1 HETATM 2 O O1 EDO . . . C 3 -20.003 -5.128 22.147 1 59.49 ? O1 EDO 402 A 1 HETATM 3 C C2 EDO . . . C 3 -20.718 -7.331 21.45 1 59.54 ? C2 EDO 402 A 1 HETATM 4 O O2 EDO . . . C 3 -21.806 -7.398 22.378 1 59.91 ? O2 EDO 402 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #