data_8QM5 # _model_server_result.job_id bop82UrNKkPWcVvmyDLlBA _model_server_result.datetime_utc '2025-01-24 23:41:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qm5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 8QM5 # _exptl.entry_id 8QM5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.57 _cell.angle_gamma 90 _cell.entry_id 8QM5 _cell.length_a 47.124 _cell.length_b 68.877 _cell.length_c 63.729 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QM5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 237 n n C1 C2 PGE sing 238 n n C1 H1 PGE sing 239 n n C1 H12 PGE sing 240 n n O1 HO1 PGE sing 241 n n C2 O2 PGE sing 242 n n C2 H2 PGE sing 243 n n C2 H22 PGE sing 244 n n O2 C3 PGE sing 245 n n C3 C4 PGE sing 246 n n C3 H3 PGE sing 247 n n C3 H32 PGE sing 248 n n C4 O3 PGE sing 249 n n C4 H4 PGE sing 250 n n C4 H42 PGE sing 251 n n O4 C6 PGE sing 252 n n O4 HO4 PGE sing 253 n n C6 C5 PGE sing 254 n n C6 H6 PGE sing 255 n n C6 H62 PGE sing 256 n n C5 O3 PGE sing 257 n n C5 H5 PGE sing 258 n n C5 H52 PGE sing 259 n n # _atom_sites.entry_id 8QM5 _atom_sites.fract_transf_matrix[1][1] 0.021221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002444 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014519 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015795 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 W4U A 1 301 1 W4U L01 . D 3 PGE B 1 301 301 PGE PGE . E 2 W4U B 1 302 1 W4U L02 . F 4 HOH A 1 401 214 HOH HOH . F 4 HOH A 2 402 490 HOH HOH . F 4 HOH A 3 403 511 HOH HOH . F 4 HOH A 4 404 387 HOH HOH . F 4 HOH A 5 405 11 HOH HOH . F 4 HOH A 6 406 22 HOH HOH . F 4 HOH A 7 407 481 HOH HOH . F 4 HOH A 8 408 18 HOH HOH . F 4 HOH A 9 409 98 HOH HOH . F 4 HOH A 10 410 37 HOH HOH . F 4 HOH A 11 411 242 HOH HOH . F 4 HOH A 12 412 245 HOH HOH . F 4 HOH A 13 413 504 HOH HOH . F 4 HOH A 14 414 527 HOH HOH . F 4 HOH A 15 415 102 HOH HOH . F 4 HOH A 16 416 9 HOH HOH . F 4 HOH A 17 417 443 HOH HOH . F 4 HOH A 18 418 334 HOH HOH . F 4 HOH A 19 419 111 HOH HOH . F 4 HOH A 20 420 146 HOH HOH . F 4 HOH A 21 421 488 HOH HOH . F 4 HOH A 22 422 43 HOH HOH . F 4 HOH A 23 423 97 HOH HOH . F 4 HOH A 24 424 10 HOH HOH . F 4 HOH A 25 425 147 HOH HOH . F 4 HOH A 26 426 17 HOH HOH . F 4 HOH A 27 427 71 HOH HOH . F 4 HOH A 28 428 81 HOH HOH . F 4 HOH A 29 429 378 HOH HOH . F 4 HOH A 30 430 188 HOH HOH . F 4 HOH A 31 431 402 HOH HOH . F 4 HOH A 32 432 512 HOH HOH . F 4 HOH A 33 433 380 HOH HOH . F 4 HOH A 34 434 476 HOH HOH . F 4 HOH A 35 435 480 HOH HOH . F 4 HOH A 36 436 31 HOH HOH . F 4 HOH A 37 437 419 HOH HOH . F 4 HOH A 38 438 53 HOH HOH . F 4 HOH A 39 439 2 HOH HOH . F 4 HOH A 40 440 202 HOH HOH . F 4 HOH A 41 441 482 HOH HOH . F 4 HOH A 42 442 192 HOH HOH . F 4 HOH A 43 443 51 HOH HOH . F 4 HOH A 44 444 29 HOH HOH . F 4 HOH A 45 445 100 HOH HOH . F 4 HOH A 46 446 346 HOH HOH . F 4 HOH A 47 447 5 HOH HOH . F 4 HOH A 48 448 47 HOH HOH . F 4 HOH A 49 449 513 HOH HOH . F 4 HOH A 50 450 506 HOH HOH . F 4 HOH A 51 451 307 HOH HOH . F 4 HOH A 52 452 30 HOH HOH . F 4 HOH A 53 453 41 HOH HOH . F 4 HOH A 54 454 521 HOH HOH . F 4 HOH A 55 455 363 HOH HOH . F 4 HOH A 56 456 92 HOH HOH . F 4 HOH A 57 457 12 HOH HOH . F 4 HOH A 58 458 217 HOH HOH . F 4 HOH A 59 459 332 HOH HOH . F 4 HOH A 60 460 59 HOH HOH . F 4 HOH A 61 461 523 HOH HOH . F 4 HOH A 62 462 66 HOH HOH . F 4 HOH A 63 463 344 HOH HOH . F 4 HOH A 64 464 32 HOH HOH . F 4 HOH A 65 465 174 HOH HOH . F 4 HOH A 66 466 404 HOH HOH . F 4 HOH A 67 467 82 HOH HOH . F 4 HOH A 68 468 520 HOH HOH . F 4 HOH A 69 469 73 HOH HOH . F 4 HOH A 70 470 425 HOH HOH . F 4 HOH A 71 471 159 HOH HOH . F 4 HOH A 72 472 478 HOH HOH . F 4 HOH A 73 473 349 HOH HOH . F 4 HOH A 74 474 93 HOH HOH . F 4 HOH A 75 475 420 HOH HOH . F 4 HOH A 76 476 64 HOH HOH . F 4 HOH A 77 477 358 HOH HOH . F 4 HOH A 78 478 258 HOH HOH . F 4 HOH A 79 479 433 HOH HOH . F 4 HOH A 80 480 340 HOH HOH . F 4 HOH A 81 481 426 HOH HOH . F 4 HOH A 82 482 428 HOH HOH . F 4 HOH A 83 483 369 HOH HOH . F 4 HOH A 84 484 495 HOH HOH . F 4 HOH A 85 485 143 HOH HOH . F 4 HOH A 86 486 384 HOH HOH . F 4 HOH A 87 487 106 HOH HOH . F 4 HOH A 88 488 503 HOH HOH . F 4 HOH A 89 489 135 HOH HOH . F 4 HOH A 90 490 522 HOH HOH . F 4 HOH A 91 491 493 HOH HOH . F 4 HOH A 92 492 514 HOH HOH . F 4 HOH A 93 493 500 HOH HOH . F 4 HOH A 94 494 526 HOH HOH . F 4 HOH A 95 495 237 HOH HOH . F 4 HOH A 96 496 469 HOH HOH . F 4 HOH A 97 497 491 HOH HOH . F 4 HOH A 98 498 410 HOH HOH . G 4 HOH B 1 401 183 HOH HOH . G 4 HOH B 2 402 375 HOH HOH . G 4 HOH B 3 403 492 HOH HOH . G 4 HOH B 4 404 38 HOH HOH . G 4 HOH B 5 405 34 HOH HOH . G 4 HOH B 6 406 337 HOH HOH . G 4 HOH B 7 407 77 HOH HOH . G 4 HOH B 8 408 351 HOH HOH . G 4 HOH B 9 409 505 HOH HOH . G 4 HOH B 10 410 158 HOH HOH . G 4 HOH B 11 411 436 HOH HOH . G 4 HOH B 12 412 27 HOH HOH . G 4 HOH B 13 413 16 HOH HOH . G 4 HOH B 14 414 121 HOH HOH . G 4 HOH B 15 415 20 HOH HOH . G 4 HOH B 16 416 46 HOH HOH . G 4 HOH B 17 417 114 HOH HOH . G 4 HOH B 18 418 427 HOH HOH . G 4 HOH B 19 419 390 HOH HOH . G 4 HOH B 20 420 417 HOH HOH . G 4 HOH B 21 421 78 HOH HOH . G 4 HOH B 22 422 119 HOH HOH . G 4 HOH B 23 423 142 HOH HOH . G 4 HOH B 24 424 99 HOH HOH . G 4 HOH B 25 425 291 HOH HOH . G 4 HOH B 26 426 80 HOH HOH . G 4 HOH B 27 427 62 HOH HOH . G 4 HOH B 28 428 101 HOH HOH . G 4 HOH B 29 429 86 HOH HOH . G 4 HOH B 30 430 342 HOH HOH . G 4 HOH B 31 431 13 HOH HOH . G 4 HOH B 32 432 28 HOH HOH . G 4 HOH B 33 433 399 HOH HOH . G 4 HOH B 34 434 470 HOH HOH . G 4 HOH B 35 435 72 HOH HOH . G 4 HOH B 36 436 104 HOH HOH . G 4 HOH B 37 437 352 HOH HOH . G 4 HOH B 38 438 524 HOH HOH . G 4 HOH B 39 439 336 HOH HOH . G 4 HOH B 40 440 1 HOH HOH . G 4 HOH B 41 441 57 HOH HOH . G 4 HOH B 42 442 204 HOH HOH . G 4 HOH B 43 443 6 HOH HOH . G 4 HOH B 44 444 26 HOH HOH . G 4 HOH B 45 445 21 HOH HOH . G 4 HOH B 46 446 484 HOH HOH . G 4 HOH B 47 447 15 HOH HOH . G 4 HOH B 48 448 39 HOH HOH . G 4 HOH B 49 449 449 HOH HOH . G 4 HOH B 50 450 517 HOH HOH . G 4 HOH B 51 451 496 HOH HOH . G 4 HOH B 52 452 353 HOH HOH . G 4 HOH B 53 453 61 HOH HOH . G 4 HOH B 54 454 394 HOH HOH . G 4 HOH B 55 455 486 HOH HOH . G 4 HOH B 56 456 33 HOH HOH . G 4 HOH B 57 457 154 HOH HOH . G 4 HOH B 58 458 84 HOH HOH . G 4 HOH B 59 459 438 HOH HOH . G 4 HOH B 60 460 42 HOH HOH . G 4 HOH B 61 461 110 HOH HOH . G 4 HOH B 62 462 519 HOH HOH . G 4 HOH B 63 463 117 HOH HOH . G 4 HOH B 64 464 315 HOH HOH . G 4 HOH B 65 465 3 HOH HOH . G 4 HOH B 66 466 113 HOH HOH . G 4 HOH B 67 467 498 HOH HOH . G 4 HOH B 68 468 196 HOH HOH . G 4 HOH B 69 469 501 HOH HOH . G 4 HOH B 70 470 79 HOH HOH . G 4 HOH B 71 471 232 HOH HOH . G 4 HOH B 72 472 391 HOH HOH . G 4 HOH B 73 473 403 HOH HOH . G 4 HOH B 74 474 298 HOH HOH . G 4 HOH B 75 475 68 HOH HOH . G 4 HOH B 76 476 442 HOH HOH . G 4 HOH B 77 477 393 HOH HOH . G 4 HOH B 78 478 85 HOH HOH . G 4 HOH B 79 479 227 HOH HOH . G 4 HOH B 80 480 197 HOH HOH . G 4 HOH B 81 481 359 HOH HOH . G 4 HOH B 82 482 381 HOH HOH . G 4 HOH B 83 483 475 HOH HOH . G 4 HOH B 84 484 507 HOH HOH . G 4 HOH B 85 485 497 HOH HOH . G 4 HOH B 86 486 105 HOH HOH . G 4 HOH B 87 487 518 HOH HOH . G 4 HOH B 88 488 145 HOH HOH . G 4 HOH B 89 489 474 HOH HOH . G 4 HOH B 90 490 60 HOH HOH . G 4 HOH B 91 491 515 HOH HOH . G 4 HOH B 92 492 318 HOH HOH . G 4 HOH B 93 493 525 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 3 3.406 -9.932 25.139 1 60.15 ? C1 PGE 301 B 1 HETATM 2 O O1 PGE . . . D 3 3.393 -8.604 24.59 1 61.18 ? O1 PGE 301 B 1 HETATM 3 C C2 PGE . . . D 3 4.081 -10.864 24.2 1 59.5 ? C2 PGE 301 B 1 HETATM 4 O O2 PGE . . . D 3 5.396 -10.398 23.932 1 59.15 ? O2 PGE 301 B 1 HETATM 5 C C3 PGE . . . D 3 5.99 -10.981 22.78 1 58.38 ? C3 PGE 301 B 1 HETATM 6 C C4 PGE . . . D 3 7.424 -11.328 23.036 1 57.58 ? C4 PGE 301 B 1 HETATM 7 O O4 PGE . . . D 3 10.575 -8.309 24.654 1 59.37 ? O4 PGE 301 B 1 HETATM 8 C C6 PGE . . . D 3 10.097 -8.931 23.44 1 59 ? C6 PGE 301 B 1 HETATM 9 C C5 PGE . . . D 3 9.489 -10.305 23.673 1 57.93 ? C5 PGE 301 B 1 HETATM 10 O O3 PGE . . . D 3 8.079 -10.195 23.57 1 57.4 ? O3 PGE 301 B 1 # _model_server_stats.io_time_ms 184 _model_server_stats.parse_time_ms 120 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #