data_8QM9
#
_model_server_result.job_id            rO1T6YWBqjMEl7MK22uA5g 
_model_server_result.datetime_utc      '2025-01-24 17:38:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qm9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":301}' 
#
_entry.id    8QM9 
#
_exptl.entry_id    8QM9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.71 
_cell.angle_gamma         90 
_cell.entry_id            8QM9 
_cell.length_a            47.284 
_cell.length_b            69.273 
_cell.length_c            64.656 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QM9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 92 n n 
C1 C2 EDO sing 93 n n 
C1 H11 EDO sing 94 n n 
C1 H12 EDO sing 95 n n 
O1 HO1 EDO sing 96 n n 
C2 O2 EDO sing 97 n n 
C2 H21 EDO sing 98 n n 
C2 H22 EDO sing 99 n n 
O2 HO2 EDO sing 100 n n 
#
_atom_sites.entry_id                     8QM9 
_atom_sites.fract_transf_matrix[1][1]    0.021149 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002115 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014436 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015544 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 301 301 EDO EDO . 
D 3 PEG A 1 302 401 PEG PEG . 
E 4 DMS A 1 303 328 DMS DMS . 
F 5 W4K A 1 304 1 W4K L01 . 
G 2 EDO B 1 301 301 EDO EDO . 
H 2 EDO B 1 302 401 EDO EDO . 
I 3 PEG B 1 303 329 PEG PEG . 
J 4 DMS B 1 304 330 DMS DMS . 
K 3 PEG B 1 305 401 PEG PEG . 
L 3 PEG B 1 306 501 PEG PEG . 
M 5 W4K B 1 307 1 W4K L02 . 
N 6 HOH A 1 401 18 HOH HOH . 
N 6 HOH A 2 402 28 HOH HOH . 
N 6 HOH A 3 403 256 HOH HOH . 
N 6 HOH A 4 404 9 HOH HOH . 
N 6 HOH A 5 405 15 HOH HOH . 
N 6 HOH A 6 406 160 HOH HOH . 
N 6 HOH A 7 407 216 HOH HOH . 
N 6 HOH A 8 408 219 HOH HOH . 
N 6 HOH A 9 409 320 HOH HOH . 
N 6 HOH A 10 410 190 HOH HOH . 
N 6 HOH A 11 411 131 HOH HOH . 
N 6 HOH A 12 412 118 HOH HOH . 
N 6 HOH A 13 413 1 HOH HOH . 
N 6 HOH A 14 414 211 HOH HOH . 
N 6 HOH A 15 415 29 HOH HOH . 
N 6 HOH A 16 416 145 HOH HOH . 
N 6 HOH A 17 417 89 HOH HOH . 
N 6 HOH A 18 418 109 HOH HOH . 
N 6 HOH A 19 419 72 HOH HOH . 
N 6 HOH A 20 420 121 HOH HOH . 
N 6 HOH A 21 421 19 HOH HOH . 
N 6 HOH A 22 422 218 HOH HOH . 
N 6 HOH A 23 423 14 HOH HOH . 
N 6 HOH A 24 424 7 HOH HOH . 
N 6 HOH A 25 425 62 HOH HOH . 
N 6 HOH A 26 426 234 HOH HOH . 
N 6 HOH A 27 427 144 HOH HOH . 
N 6 HOH A 28 428 155 HOH HOH . 
N 6 HOH A 29 429 269 HOH HOH . 
N 6 HOH A 30 430 128 HOH HOH . 
N 6 HOH A 31 431 281 HOH HOH . 
N 6 HOH A 32 432 45 HOH HOH . 
N 6 HOH A 33 433 8 HOH HOH . 
N 6 HOH A 34 434 174 HOH HOH . 
N 6 HOH A 35 435 323 HOH HOH . 
N 6 HOH A 36 436 176 HOH HOH . 
N 6 HOH A 37 437 125 HOH HOH . 
N 6 HOH A 38 438 123 HOH HOH . 
N 6 HOH A 39 439 26 HOH HOH . 
N 6 HOH A 40 440 17 HOH HOH . 
N 6 HOH A 41 441 44 HOH HOH . 
N 6 HOH A 42 442 130 HOH HOH . 
N 6 HOH A 43 443 180 HOH HOH . 
N 6 HOH A 44 444 181 HOH HOH . 
N 6 HOH A 45 445 110 HOH HOH . 
N 6 HOH A 46 446 59 HOH HOH . 
N 6 HOH A 47 447 66 HOH HOH . 
N 6 HOH A 48 448 33 HOH HOH . 
N 6 HOH A 49 449 22 HOH HOH . 
N 6 HOH A 50 450 12 HOH HOH . 
N 6 HOH A 51 451 99 HOH HOH . 
N 6 HOH A 52 452 74 HOH HOH . 
N 6 HOH A 53 453 101 HOH HOH . 
N 6 HOH A 54 454 115 HOH HOH . 
N 6 HOH A 55 455 3 HOH HOH . 
N 6 HOH A 56 456 10 HOH HOH . 
N 6 HOH A 57 457 210 HOH HOH . 
N 6 HOH A 58 458 32 HOH HOH . 
N 6 HOH A 59 459 154 HOH HOH . 
N 6 HOH A 60 460 5 HOH HOH . 
N 6 HOH A 61 461 68 HOH HOH . 
N 6 HOH A 62 462 202 HOH HOH . 
N 6 HOH A 63 463 158 HOH HOH . 
N 6 HOH A 64 464 163 HOH HOH . 
N 6 HOH A 65 465 306 HOH HOH . 
N 6 HOH A 66 466 225 HOH HOH . 
N 6 HOH A 67 467 236 HOH HOH . 
N 6 HOH A 68 468 151 HOH HOH . 
N 6 HOH A 69 469 12 HOH HOH . 
N 6 HOH A 70 470 270 HOH HOH . 
N 6 HOH A 71 471 78 HOH HOH . 
N 6 HOH A 72 472 284 HOH HOH . 
N 6 HOH A 73 473 289 HOH HOH . 
N 6 HOH A 74 474 294 HOH HOH . 
N 6 HOH A 75 475 177 HOH HOH . 
N 6 HOH A 76 476 224 HOH HOH . 
N 6 HOH A 77 477 65 HOH HOH . 
N 6 HOH A 78 478 42 HOH HOH . 
N 6 HOH A 79 479 159 HOH HOH . 
N 6 HOH A 80 480 75 HOH HOH . 
N 6 HOH A 81 481 79 HOH HOH . 
N 6 HOH A 82 482 193 HOH HOH . 
N 6 HOH A 83 483 82 HOH HOH . 
N 6 HOH A 84 484 141 HOH HOH . 
N 6 HOH A 85 485 317 HOH HOH . 
N 6 HOH A 86 486 192 HOH HOH . 
N 6 HOH A 87 487 290 HOH HOH . 
N 6 HOH A 88 488 265 HOH HOH . 
N 6 HOH A 89 489 302 HOH HOH . 
N 6 HOH A 90 490 197 HOH HOH . 
N 6 HOH A 91 491 11 HOH HOH . 
N 6 HOH A 92 492 324 HOH HOH . 
N 6 HOH A 93 493 276 HOH HOH . 
N 6 HOH A 94 494 70 HOH HOH . 
N 6 HOH A 95 495 165 HOH HOH . 
N 6 HOH A 96 496 76 HOH HOH . 
N 6 HOH A 97 497 279 HOH HOH . 
N 6 HOH A 98 498 126 HOH HOH . 
N 6 HOH A 99 499 61 HOH HOH . 
N 6 HOH A 100 500 261 HOH HOH . 
N 6 HOH A 101 501 67 HOH HOH . 
N 6 HOH A 102 502 170 HOH HOH . 
N 6 HOH A 103 503 239 HOH HOH . 
N 6 HOH A 104 504 94 HOH HOH . 
N 6 HOH A 105 505 314 HOH HOH . 
N 6 HOH A 106 506 203 HOH HOH . 
N 6 HOH A 107 507 237 HOH HOH . 
N 6 HOH A 108 508 157 HOH HOH . 
N 6 HOH A 109 509 98 HOH HOH . 
N 6 HOH A 110 510 248 HOH HOH . 
N 6 HOH A 111 511 288 HOH HOH . 
N 6 HOH A 112 512 156 HOH HOH . 
N 6 HOH A 113 513 84 HOH HOH . 
N 6 HOH A 114 514 215 HOH HOH . 
N 6 HOH A 115 515 46 HOH HOH . 
N 6 HOH A 116 516 88 HOH HOH . 
N 6 HOH A 117 517 40 HOH HOH . 
N 6 HOH A 118 518 146 HOH HOH . 
N 6 HOH A 119 519 34 HOH HOH . 
N 6 HOH A 120 520 200 HOH HOH . 
N 6 HOH A 121 521 148 HOH HOH . 
N 6 HOH A 122 522 268 HOH HOH . 
N 6 HOH A 123 523 220 HOH HOH . 
N 6 HOH A 124 524 173 HOH HOH . 
N 6 HOH A 125 525 277 HOH HOH . 
N 6 HOH A 126 526 257 HOH HOH . 
N 6 HOH A 127 527 7 HOH HOH . 
N 6 HOH A 128 528 334 HOH HOH . 
N 6 HOH A 129 529 147 HOH HOH . 
N 6 HOH A 130 530 55 HOH HOH . 
N 6 HOH A 131 531 204 HOH HOH . 
N 6 HOH A 132 532 209 HOH HOH . 
N 6 HOH A 133 533 241 HOH HOH . 
N 6 HOH A 134 534 41 HOH HOH . 
N 6 HOH A 135 535 138 HOH HOH . 
N 6 HOH A 136 536 296 HOH HOH . 
N 6 HOH A 137 537 3 HOH HOH . 
N 6 HOH A 138 538 243 HOH HOH . 
N 6 HOH A 139 539 233 HOH HOH . 
N 6 HOH A 140 540 230 HOH HOH . 
N 6 HOH A 141 541 321 HOH HOH . 
N 6 HOH A 142 542 56 HOH HOH . 
N 6 HOH A 143 543 5 HOH HOH . 
N 6 HOH A 144 544 287 HOH HOH . 
N 6 HOH A 145 545 16 HOH HOH . 
N 6 HOH A 146 546 232 HOH HOH . 
N 6 HOH A 147 547 96 HOH HOH . 
N 6 HOH A 148 548 9 HOH HOH . 
N 6 HOH A 149 549 129 HOH HOH . 
N 6 HOH A 150 550 53 HOH HOH . 
N 6 HOH A 151 551 107 HOH HOH . 
N 6 HOH A 152 552 142 HOH HOH . 
N 6 HOH A 153 553 325 HOH HOH . 
N 6 HOH A 154 554 73 HOH HOH . 
N 6 HOH A 155 555 222 HOH HOH . 
N 6 HOH A 156 556 100 HOH HOH . 
N 6 HOH A 157 557 258 HOH HOH . 
N 6 HOH A 158 558 179 HOH HOH . 
N 6 HOH A 159 559 240 HOH HOH . 
N 6 HOH A 160 560 6 HOH HOH . 
N 6 HOH A 161 561 113 HOH HOH . 
N 6 HOH A 162 562 267 HOH HOH . 
N 6 HOH A 163 563 250 HOH HOH . 
N 6 HOH A 164 564 8 HOH HOH . 
N 6 HOH A 165 565 235 HOH HOH . 
N 6 HOH A 166 566 64 HOH HOH . 
N 6 HOH A 167 567 238 HOH HOH . 
N 6 HOH A 168 568 137 HOH HOH . 
O 6 HOH B 1 401 195 HOH HOH . 
O 6 HOH B 2 402 298 HOH HOH . 
O 6 HOH B 3 403 259 HOH HOH . 
O 6 HOH B 4 404 48 HOH HOH . 
O 6 HOH B 5 405 50 HOH HOH . 
O 6 HOH B 6 406 39 HOH HOH . 
O 6 HOH B 7 407 175 HOH HOH . 
O 6 HOH B 8 408 251 HOH HOH . 
O 6 HOH B 9 409 24 HOH HOH . 
O 6 HOH B 10 410 172 HOH HOH . 
O 6 HOH B 11 411 213 HOH HOH . 
O 6 HOH B 12 412 124 HOH HOH . 
O 6 HOH B 13 413 111 HOH HOH . 
O 6 HOH B 14 414 332 HOH HOH . 
O 6 HOH B 15 415 249 HOH HOH . 
O 6 HOH B 16 416 4 HOH HOH . 
O 6 HOH B 17 417 27 HOH HOH . 
O 6 HOH B 18 418 127 HOH HOH . 
O 6 HOH B 19 419 47 HOH HOH . 
O 6 HOH B 20 420 116 HOH HOH . 
O 6 HOH B 21 421 30 HOH HOH . 
O 6 HOH B 22 422 6 HOH HOH . 
O 6 HOH B 23 423 217 HOH HOH . 
O 6 HOH B 24 424 120 HOH HOH . 
O 6 HOH B 25 425 38 HOH HOH . 
O 6 HOH B 26 426 282 HOH HOH . 
O 6 HOH B 27 427 319 HOH HOH . 
O 6 HOH B 28 428 117 HOH HOH . 
O 6 HOH B 29 429 31 HOH HOH . 
O 6 HOH B 30 430 103 HOH HOH . 
O 6 HOH B 31 431 77 HOH HOH . 
O 6 HOH B 32 432 81 HOH HOH . 
O 6 HOH B 33 433 315 HOH HOH . 
O 6 HOH B 34 434 266 HOH HOH . 
O 6 HOH B 35 435 2 HOH HOH . 
O 6 HOH B 36 436 91 HOH HOH . 
O 6 HOH B 37 437 152 HOH HOH . 
O 6 HOH B 38 438 122 HOH HOH . 
O 6 HOH B 39 439 221 HOH HOH . 
O 6 HOH B 40 440 54 HOH HOH . 
O 6 HOH B 41 441 60 HOH HOH . 
O 6 HOH B 42 442 149 HOH HOH . 
O 6 HOH B 43 443 58 HOH HOH . 
O 6 HOH B 44 444 95 HOH HOH . 
O 6 HOH B 45 445 169 HOH HOH . 
O 6 HOH B 46 446 104 HOH HOH . 
O 6 HOH B 47 447 167 HOH HOH . 
O 6 HOH B 48 448 133 HOH HOH . 
O 6 HOH B 49 449 135 HOH HOH . 
O 6 HOH B 50 450 212 HOH HOH . 
O 6 HOH B 51 451 272 HOH HOH . 
O 6 HOH B 52 452 4 HOH HOH . 
O 6 HOH B 53 453 309 HOH HOH . 
O 6 HOH B 54 454 187 HOH HOH . 
O 6 HOH B 55 455 63 HOH HOH . 
O 6 HOH B 56 456 196 HOH HOH . 
O 6 HOH B 57 457 201 HOH HOH . 
O 6 HOH B 58 458 136 HOH HOH . 
O 6 HOH B 59 459 206 HOH HOH . 
O 6 HOH B 60 460 86 HOH HOH . 
O 6 HOH B 61 461 254 HOH HOH . 
O 6 HOH B 62 462 183 HOH HOH . 
O 6 HOH B 63 463 186 HOH HOH . 
O 6 HOH B 64 464 226 HOH HOH . 
O 6 HOH B 65 465 83 HOH HOH . 
O 6 HOH B 66 466 57 HOH HOH . 
O 6 HOH B 67 467 20 HOH HOH . 
O 6 HOH B 68 468 229 HOH HOH . 
O 6 HOH B 69 469 69 HOH HOH . 
O 6 HOH B 70 470 168 HOH HOH . 
O 6 HOH B 71 471 153 HOH HOH . 
O 6 HOH B 72 472 1 HOH HOH . 
O 6 HOH B 73 473 295 HOH HOH . 
O 6 HOH B 74 474 285 HOH HOH . 
O 6 HOH B 75 475 2 HOH HOH . 
O 6 HOH B 76 476 134 HOH HOH . 
O 6 HOH B 77 477 291 HOH HOH . 
O 6 HOH B 78 478 106 HOH HOH . 
O 6 HOH B 79 479 178 HOH HOH . 
O 6 HOH B 80 480 71 HOH HOH . 
O 6 HOH B 81 481 23 HOH HOH . 
O 6 HOH B 82 482 143 HOH HOH . 
O 6 HOH B 83 483 208 HOH HOH . 
O 6 HOH B 84 484 164 HOH HOH . 
O 6 HOH B 85 485 90 HOH HOH . 
O 6 HOH B 86 486 162 HOH HOH . 
O 6 HOH B 87 487 278 HOH HOH . 
O 6 HOH B 88 488 286 HOH HOH . 
O 6 HOH B 89 489 311 HOH HOH . 
O 6 HOH B 90 490 185 HOH HOH . 
O 6 HOH B 91 491 92 HOH HOH . 
O 6 HOH B 92 492 191 HOH HOH . 
O 6 HOH B 93 493 49 HOH HOH . 
O 6 HOH B 94 494 247 HOH HOH . 
O 6 HOH B 95 495 182 HOH HOH . 
O 6 HOH B 96 496 10 HOH HOH . 
O 6 HOH B 97 497 231 HOH HOH . 
O 6 HOH B 98 498 316 HOH HOH . 
O 6 HOH B 99 499 228 HOH HOH . 
O 6 HOH B 100 500 25 HOH HOH . 
O 6 HOH B 101 501 166 HOH HOH . 
O 6 HOH B 102 502 297 HOH HOH . 
O 6 HOH B 103 503 300 HOH HOH . 
O 6 HOH B 104 504 161 HOH HOH . 
O 6 HOH B 105 505 105 HOH HOH . 
O 6 HOH B 106 506 227 HOH HOH . 
O 6 HOH B 107 507 322 HOH HOH . 
O 6 HOH B 108 508 52 HOH HOH . 
O 6 HOH B 109 509 301 HOH HOH . 
O 6 HOH B 110 510 264 HOH HOH . 
O 6 HOH B 111 511 245 HOH HOH . 
O 6 HOH B 112 512 318 HOH HOH . 
O 6 HOH B 113 513 271 HOH HOH . 
O 6 HOH B 114 514 93 HOH HOH . 
O 6 HOH B 115 515 242 HOH HOH . 
O 6 HOH B 116 516 108 HOH HOH . 
O 6 HOH B 117 517 246 HOH HOH . 
O 6 HOH B 118 518 150 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 2 -10.075 -31.976 21.15 1 48.97 ? C1 EDO 301 B 1 
HETATM 2 O O1 EDO . . . G 2 -10.645 -32.559 22.334 1 50.05 ? O1 EDO 301 B 1 
HETATM 3 C C2 EDO . . . G 2 -10.913 -30.738 20.632 1 47.54 ? C2 EDO 301 B 1 
HETATM 4 O O2 EDO . . . G 2 -10.231 -30.014 19.566 1 46.48 ? O2 EDO 301 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#