data_8QNC # _model_server_result.job_id RttPqcu6yFhc8MnX-ubUpw _model_server_result.datetime_utc '2024-12-02 15:47:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qnc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 8QNC # _exptl.entry_id 8QNC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.29 _cell.angle_gamma 90 _cell.entry_id 8QNC _cell.length_a 53.387 _cell.length_b 69.657 _cell.length_c 67.608 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QNC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 220 n n C1 C2 GOL sing 221 n n C1 H11 GOL sing 222 n n C1 H12 GOL sing 223 n n O1 HO1 GOL sing 224 n n C2 O2 GOL sing 225 n n C2 C3 GOL sing 226 n n C2 H2 GOL sing 227 n n O2 HO2 GOL sing 228 n n C3 O3 GOL sing 229 n n C3 H31 GOL sing 230 n n C3 H32 GOL sing 231 n n O3 HO3 GOL sing 232 n n # _atom_sites.entry_id 8QNC _atom_sites.fract_transf_matrix[1][1] 0.018731 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002731 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014948 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 507 FAD FAD . C 3 GOL A 1 602 508 GOL GOL . D 3 GOL A 1 603 509 GOL GOL . E 4 PEG A 1 604 510 PEG PEG . F 5 HOH A 1 701 675 HOH HOH . F 5 HOH A 2 702 672 HOH HOH . F 5 HOH A 3 703 260 HOH HOH . F 5 HOH A 4 704 673 HOH HOH . F 5 HOH A 5 705 677 HOH HOH . F 5 HOH A 6 706 661 HOH HOH . F 5 HOH A 7 707 189 HOH HOH . F 5 HOH A 8 708 120 HOH HOH . F 5 HOH A 9 709 667 HOH HOH . F 5 HOH A 10 710 178 HOH HOH . F 5 HOH A 11 711 678 HOH HOH . F 5 HOH A 12 712 665 HOH HOH . F 5 HOH A 13 713 96 HOH HOH . F 5 HOH A 14 714 663 HOH HOH . F 5 HOH A 15 715 75 HOH HOH . F 5 HOH A 16 716 643 HOH HOH . F 5 HOH A 17 717 104 HOH HOH . F 5 HOH A 18 718 113 HOH HOH . F 5 HOH A 19 719 669 HOH HOH . F 5 HOH A 20 720 517 HOH HOH . F 5 HOH A 21 721 71 HOH HOH . F 5 HOH A 22 722 498 HOH HOH . F 5 HOH A 23 723 17 HOH HOH . F 5 HOH A 24 724 84 HOH HOH . F 5 HOH A 25 725 221 HOH HOH . F 5 HOH A 26 726 114 HOH HOH . F 5 HOH A 27 727 303 HOH HOH . F 5 HOH A 28 728 181 HOH HOH . F 5 HOH A 29 729 664 HOH HOH . F 5 HOH A 30 730 70 HOH HOH . F 5 HOH A 31 731 404 HOH HOH . F 5 HOH A 32 732 680 HOH HOH . F 5 HOH A 33 733 336 HOH HOH . F 5 HOH A 34 734 241 HOH HOH . F 5 HOH A 35 735 415 HOH HOH . F 5 HOH A 36 736 679 HOH HOH . F 5 HOH A 37 737 375 HOH HOH . F 5 HOH A 38 738 286 HOH HOH . F 5 HOH A 39 739 644 HOH HOH . F 5 HOH A 40 740 230 HOH HOH . F 5 HOH A 41 741 38 HOH HOH . F 5 HOH A 42 742 668 HOH HOH . F 5 HOH A 43 743 180 HOH HOH . F 5 HOH A 44 744 86 HOH HOH . F 5 HOH A 45 745 110 HOH HOH . F 5 HOH A 46 746 577 HOH HOH . F 5 HOH A 47 747 258 HOH HOH . F 5 HOH A 48 748 655 HOH HOH . F 5 HOH A 49 749 122 HOH HOH . F 5 HOH A 50 750 662 HOH HOH . F 5 HOH A 51 751 124 HOH HOH . F 5 HOH A 52 752 636 HOH HOH . F 5 HOH A 53 753 254 HOH HOH . F 5 HOH A 54 754 10 HOH HOH . F 5 HOH A 55 755 47 HOH HOH . F 5 HOH A 56 756 182 HOH HOH . F 5 HOH A 57 757 31 HOH HOH . F 5 HOH A 58 758 107 HOH HOH . F 5 HOH A 59 759 27 HOH HOH . F 5 HOH A 60 760 156 HOH HOH . F 5 HOH A 61 761 88 HOH HOH . F 5 HOH A 62 762 196 HOH HOH . F 5 HOH A 63 763 4 HOH HOH . F 5 HOH A 64 764 50 HOH HOH . F 5 HOH A 65 765 46 HOH HOH . F 5 HOH A 66 766 652 HOH HOH . F 5 HOH A 67 767 94 HOH HOH . F 5 HOH A 68 768 191 HOH HOH . F 5 HOH A 69 769 126 HOH HOH . F 5 HOH A 70 770 130 HOH HOH . F 5 HOH A 71 771 660 HOH HOH . F 5 HOH A 72 772 1 HOH HOH . F 5 HOH A 73 773 193 HOH HOH . F 5 HOH A 74 774 635 HOH HOH . F 5 HOH A 75 775 15 HOH HOH . F 5 HOH A 76 776 378 HOH HOH . F 5 HOH A 77 777 11 HOH HOH . F 5 HOH A 78 778 69 HOH HOH . F 5 HOH A 79 779 306 HOH HOH . F 5 HOH A 80 780 116 HOH HOH . F 5 HOH A 81 781 219 HOH HOH . F 5 HOH A 82 782 246 HOH HOH . F 5 HOH A 83 783 137 HOH HOH . F 5 HOH A 84 784 222 HOH HOH . F 5 HOH A 85 785 92 HOH HOH . F 5 HOH A 86 786 108 HOH HOH . F 5 HOH A 87 787 161 HOH HOH . F 5 HOH A 88 788 638 HOH HOH . F 5 HOH A 89 789 44 HOH HOH . F 5 HOH A 90 790 87 HOH HOH . F 5 HOH A 91 791 676 HOH HOH . F 5 HOH A 92 792 118 HOH HOH . F 5 HOH A 93 793 16 HOH HOH . F 5 HOH A 94 794 372 HOH HOH . F 5 HOH A 95 795 261 HOH HOH . F 5 HOH A 96 796 28 HOH HOH . F 5 HOH A 97 797 192 HOH HOH . F 5 HOH A 98 798 395 HOH HOH . F 5 HOH A 99 799 9 HOH HOH . F 5 HOH A 100 800 109 HOH HOH . F 5 HOH A 101 801 35 HOH HOH . F 5 HOH A 102 802 48 HOH HOH . F 5 HOH A 103 803 358 HOH HOH . F 5 HOH A 104 804 167 HOH HOH . F 5 HOH A 105 805 36 HOH HOH . F 5 HOH A 106 806 175 HOH HOH . F 5 HOH A 107 807 198 HOH HOH . F 5 HOH A 108 808 202 HOH HOH . F 5 HOH A 109 809 154 HOH HOH . F 5 HOH A 110 810 7 HOH HOH . F 5 HOH A 111 811 658 HOH HOH . F 5 HOH A 112 812 642 HOH HOH . F 5 HOH A 113 813 26 HOH HOH . F 5 HOH A 114 814 433 HOH HOH . F 5 HOH A 115 815 656 HOH HOH . F 5 HOH A 116 816 339 HOH HOH . F 5 HOH A 117 817 90 HOH HOH . F 5 HOH A 118 818 18 HOH HOH . F 5 HOH A 119 819 311 HOH HOH . F 5 HOH A 120 820 141 HOH HOH . F 5 HOH A 121 821 22 HOH HOH . F 5 HOH A 122 822 19 HOH HOH . F 5 HOH A 123 823 671 HOH HOH . F 5 HOH A 124 824 129 HOH HOH . F 5 HOH A 125 825 269 HOH HOH . F 5 HOH A 126 826 42 HOH HOH . F 5 HOH A 127 827 63 HOH HOH . F 5 HOH A 128 828 132 HOH HOH . F 5 HOH A 129 829 345 HOH HOH . F 5 HOH A 130 830 281 HOH HOH . F 5 HOH A 131 831 81 HOH HOH . F 5 HOH A 132 832 55 HOH HOH . F 5 HOH A 133 833 307 HOH HOH . F 5 HOH A 134 834 37 HOH HOH . F 5 HOH A 135 835 225 HOH HOH . F 5 HOH A 136 836 186 HOH HOH . F 5 HOH A 137 837 194 HOH HOH . F 5 HOH A 138 838 131 HOH HOH . F 5 HOH A 139 839 100 HOH HOH . F 5 HOH A 140 840 634 HOH HOH . F 5 HOH A 141 841 138 HOH HOH . F 5 HOH A 142 842 184 HOH HOH . F 5 HOH A 143 843 232 HOH HOH . F 5 HOH A 144 844 273 HOH HOH . F 5 HOH A 145 845 666 HOH HOH . F 5 HOH A 146 846 348 HOH HOH . F 5 HOH A 147 847 14 HOH HOH . F 5 HOH A 148 848 207 HOH HOH . F 5 HOH A 149 849 72 HOH HOH . F 5 HOH A 150 850 313 HOH HOH . F 5 HOH A 151 851 226 HOH HOH . F 5 HOH A 152 852 670 HOH HOH . F 5 HOH A 153 853 25 HOH HOH . F 5 HOH A 154 854 320 HOH HOH . F 5 HOH A 155 855 61 HOH HOH . F 5 HOH A 156 856 641 HOH HOH . F 5 HOH A 157 857 39 HOH HOH . F 5 HOH A 158 858 267 HOH HOH . F 5 HOH A 159 859 578 HOH HOH . F 5 HOH A 160 860 93 HOH HOH . F 5 HOH A 161 861 297 HOH HOH . F 5 HOH A 162 862 12 HOH HOH . F 5 HOH A 163 863 183 HOH HOH . F 5 HOH A 164 864 43 HOH HOH . F 5 HOH A 165 865 2 HOH HOH . F 5 HOH A 166 866 41 HOH HOH . F 5 HOH A 167 867 68 HOH HOH . F 5 HOH A 168 868 637 HOH HOH . F 5 HOH A 169 869 21 HOH HOH . F 5 HOH A 170 870 142 HOH HOH . F 5 HOH A 171 871 58 HOH HOH . F 5 HOH A 172 872 34 HOH HOH . F 5 HOH A 173 873 89 HOH HOH . F 5 HOH A 174 874 3 HOH HOH . F 5 HOH A 175 875 53 HOH HOH . F 5 HOH A 176 876 224 HOH HOH . F 5 HOH A 177 877 170 HOH HOH . F 5 HOH A 178 878 52 HOH HOH . F 5 HOH A 179 879 250 HOH HOH . F 5 HOH A 180 880 190 HOH HOH . F 5 HOH A 181 881 659 HOH HOH . F 5 HOH A 182 882 103 HOH HOH . F 5 HOH A 183 883 33 HOH HOH . F 5 HOH A 184 884 73 HOH HOH . F 5 HOH A 185 885 290 HOH HOH . F 5 HOH A 186 886 266 HOH HOH . F 5 HOH A 187 887 66 HOH HOH . F 5 HOH A 188 888 158 HOH HOH . F 5 HOH A 189 889 128 HOH HOH . F 5 HOH A 190 890 125 HOH HOH . F 5 HOH A 191 891 51 HOH HOH . F 5 HOH A 192 892 40 HOH HOH . F 5 HOH A 193 893 492 HOH HOH . F 5 HOH A 194 894 409 HOH HOH . F 5 HOH A 195 895 32 HOH HOH . F 5 HOH A 196 896 54 HOH HOH . F 5 HOH A 197 897 434 HOH HOH . F 5 HOH A 198 898 82 HOH HOH . F 5 HOH A 199 899 99 HOH HOH . F 5 HOH A 200 900 251 HOH HOH . F 5 HOH A 201 901 322 HOH HOH . F 5 HOH A 202 902 147 HOH HOH . F 5 HOH A 203 903 101 HOH HOH . F 5 HOH A 204 904 133 HOH HOH . F 5 HOH A 205 905 657 HOH HOH . F 5 HOH A 206 906 165 HOH HOH . F 5 HOH A 207 907 105 HOH HOH . F 5 HOH A 208 908 30 HOH HOH . F 5 HOH A 209 909 447 HOH HOH . F 5 HOH A 210 910 119 HOH HOH . F 5 HOH A 211 911 316 HOH HOH . F 5 HOH A 212 912 187 HOH HOH . F 5 HOH A 213 913 97 HOH HOH . F 5 HOH A 214 914 368 HOH HOH . F 5 HOH A 215 915 646 HOH HOH . F 5 HOH A 216 916 239 HOH HOH . F 5 HOH A 217 917 220 HOH HOH . F 5 HOH A 218 918 117 HOH HOH . F 5 HOH A 219 919 522 HOH HOH . F 5 HOH A 220 920 91 HOH HOH . F 5 HOH A 221 921 148 HOH HOH . F 5 HOH A 222 922 57 HOH HOH . F 5 HOH A 223 923 140 HOH HOH . F 5 HOH A 224 924 640 HOH HOH . F 5 HOH A 225 925 149 HOH HOH . F 5 HOH A 226 926 23 HOH HOH . F 5 HOH A 227 927 422 HOH HOH . F 5 HOH A 228 928 649 HOH HOH . F 5 HOH A 229 929 255 HOH HOH . F 5 HOH A 230 930 83 HOH HOH . F 5 HOH A 231 931 370 HOH HOH . F 5 HOH A 232 932 74 HOH HOH . F 5 HOH A 233 933 274 HOH HOH . F 5 HOH A 234 934 209 HOH HOH . F 5 HOH A 235 935 223 HOH HOH . F 5 HOH A 236 936 95 HOH HOH . F 5 HOH A 237 937 60 HOH HOH . F 5 HOH A 238 938 8 HOH HOH . F 5 HOH A 239 939 144 HOH HOH . F 5 HOH A 240 940 388 HOH HOH . F 5 HOH A 241 941 446 HOH HOH . F 5 HOH A 242 942 518 HOH HOH . F 5 HOH A 243 943 64 HOH HOH . F 5 HOH A 244 944 112 HOH HOH . F 5 HOH A 245 945 588 HOH HOH . F 5 HOH A 246 946 538 HOH HOH . F 5 HOH A 247 947 430 HOH HOH . F 5 HOH A 248 948 380 HOH HOH . F 5 HOH A 249 949 621 HOH HOH . F 5 HOH A 250 950 335 HOH HOH . F 5 HOH A 251 951 298 HOH HOH . F 5 HOH A 252 952 243 HOH HOH . F 5 HOH A 253 953 229 HOH HOH . F 5 HOH A 254 954 171 HOH HOH . F 5 HOH A 255 955 159 HOH HOH . F 5 HOH A 256 956 213 HOH HOH . F 5 HOH A 257 957 164 HOH HOH . F 5 HOH A 258 958 179 HOH HOH . F 5 HOH A 259 959 157 HOH HOH . F 5 HOH A 260 960 349 HOH HOH . F 5 HOH A 261 961 651 HOH HOH . F 5 HOH A 262 962 294 HOH HOH . F 5 HOH A 263 963 206 HOH HOH . F 5 HOH A 264 964 653 HOH HOH . F 5 HOH A 265 965 572 HOH HOH . F 5 HOH A 266 966 571 HOH HOH . F 5 HOH A 267 967 570 HOH HOH . F 5 HOH A 268 968 580 HOH HOH . F 5 HOH A 269 969 574 HOH HOH . F 5 HOH A 270 970 435 HOH HOH . F 5 HOH A 271 971 429 HOH HOH . F 5 HOH A 272 972 569 HOH HOH . F 5 HOH A 273 973 674 HOH HOH . F 5 HOH A 274 974 374 HOH HOH . F 5 HOH A 275 975 203 HOH HOH . F 5 HOH A 276 976 544 HOH HOH . F 5 HOH A 277 977 342 HOH HOH . F 5 HOH A 278 978 633 HOH HOH . F 5 HOH A 279 979 597 HOH HOH . F 5 HOH A 280 980 13 HOH HOH . F 5 HOH A 281 981 363 HOH HOH . F 5 HOH A 282 982 462 HOH HOH . F 5 HOH A 283 983 330 HOH HOH . F 5 HOH A 284 984 195 HOH HOH . F 5 HOH A 285 985 602 HOH HOH . F 5 HOH A 286 986 568 HOH HOH . F 5 HOH A 287 987 145 HOH HOH . F 5 HOH A 288 988 77 HOH HOH . F 5 HOH A 289 989 324 HOH HOH . F 5 HOH A 290 990 586 HOH HOH . F 5 HOH A 291 991 337 HOH HOH . F 5 HOH A 292 992 566 HOH HOH . F 5 HOH A 293 993 139 HOH HOH . F 5 HOH A 294 994 252 HOH HOH . F 5 HOH A 295 995 277 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 9.905 10.879 26.002 1 50.09 ? C1 GOL 602 A 1 HETATM 2 O O1 GOL . . . C 3 10.724 11.793 25.279 1 51.28 ? O1 GOL 602 A 1 HETATM 3 C C2 GOL . . . C 3 8.732 10.37 25.183 1 48.47 ? C2 GOL 602 A 1 HETATM 4 O O2 GOL . . . C 3 8.92 10.575 23.786 1 32.86 ? O2 GOL 602 A 1 HETATM 5 C C3 GOL . . . C 3 8.419 8.905 25.421 1 50.25 ? C3 GOL 602 A 1 HETATM 6 O O3 GOL . . . C 3 8.647 8.554 26.784 1 58.28 ? O3 GOL 602 A 1 # _model_server_stats.io_time_ms 82 _model_server_stats.parse_time_ms 40 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 730 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #