data_8QNL # _model_server_result.job_id Lbxi4ioyTwwr424oZsXagQ _model_server_result.datetime_utc '2024-11-12 22:18:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qnl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 8QNL # _exptl.entry_id 8QNL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.21 _cell.angle_gamma 90 _cell.entry_id 8QNL _cell.length_a 55.18 _cell.length_b 106.922 _cell.length_c 93.499 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QNL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 8QNL _atom_sites.fract_transf_matrix[1][1] 0.018123 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004589 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011033 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 PO4 C 1 301 123 PO4 PO4 . H 3 PO4 C 1 302 251 PO4 PO4 . I 3 PO4 F 1 301 123 PO4 PO4 . J 3 PO4 F 1 302 251 PO4 PO4 . K 4 HOH A 1 201 131 HOH HOH . K 4 HOH A 2 202 134 HOH HOH . K 4 HOH A 3 203 126 HOH HOH . K 4 HOH A 4 204 129 HOH HOH . K 4 HOH A 5 205 124 HOH HOH . K 4 HOH A 6 206 130 HOH HOH . K 4 HOH A 7 207 128 HOH HOH . K 4 HOH A 8 208 127 HOH HOH . K 4 HOH A 9 209 133 HOH HOH . K 4 HOH A 10 210 125 HOH HOH . K 4 HOH A 11 211 132 HOH HOH . K 4 HOH A 12 212 135 HOH HOH . K 4 HOH A 13 213 136 HOH HOH . L 4 HOH B 1 201 120 HOH HOH . L 4 HOH B 2 202 123 HOH HOH . L 4 HOH B 3 203 124 HOH HOH . L 4 HOH B 4 204 126 HOH HOH . L 4 HOH B 5 205 129 HOH HOH . L 4 HOH B 6 206 125 HOH HOH . L 4 HOH B 7 207 128 HOH HOH . L 4 HOH B 8 208 127 HOH HOH . L 4 HOH B 9 209 121 HOH HOH . L 4 HOH B 10 210 122 HOH HOH . L 4 HOH B 11 211 130 HOH HOH . M 4 HOH C 1 401 305 HOH HOH . M 4 HOH C 2 402 271 HOH HOH . M 4 HOH C 3 403 267 HOH HOH . M 4 HOH C 4 404 301 HOH HOH . M 4 HOH C 5 405 302 HOH HOH . M 4 HOH C 6 406 278 HOH HOH . M 4 HOH C 7 407 266 HOH HOH . M 4 HOH C 8 408 254 HOH HOH . M 4 HOH C 9 409 259 HOH HOH . M 4 HOH C 10 410 292 HOH HOH . M 4 HOH C 11 411 257 HOH HOH . M 4 HOH C 12 412 291 HOH HOH . M 4 HOH C 13 413 263 HOH HOH . M 4 HOH C 14 414 275 HOH HOH . M 4 HOH C 15 415 253 HOH HOH . M 4 HOH C 16 416 307 HOH HOH . M 4 HOH C 17 417 272 HOH HOH . M 4 HOH C 18 418 281 HOH HOH . M 4 HOH C 19 419 306 HOH HOH . M 4 HOH C 20 420 295 HOH HOH . M 4 HOH C 21 421 283 HOH HOH . M 4 HOH C 22 422 260 HOH HOH . M 4 HOH C 23 423 274 HOH HOH . M 4 HOH C 24 424 255 HOH HOH . M 4 HOH C 25 425 252 HOH HOH . M 4 HOH C 26 426 286 HOH HOH . M 4 HOH C 27 427 256 HOH HOH . M 4 HOH C 28 428 258 HOH HOH . M 4 HOH C 29 429 290 HOH HOH . M 4 HOH C 30 430 264 HOH HOH . M 4 HOH C 31 431 280 HOH HOH . M 4 HOH C 32 432 288 HOH HOH . M 4 HOH C 33 433 270 HOH HOH . M 4 HOH C 34 434 308 HOH HOH . M 4 HOH C 35 435 268 HOH HOH . M 4 HOH C 36 436 297 HOH HOH . M 4 HOH C 37 437 261 HOH HOH . M 4 HOH C 38 438 273 HOH HOH . M 4 HOH C 39 439 296 HOH HOH . M 4 HOH C 40 440 293 HOH HOH . M 4 HOH C 41 441 262 HOH HOH . M 4 HOH C 42 442 277 HOH HOH . M 4 HOH C 43 443 282 HOH HOH . M 4 HOH C 44 444 294 HOH HOH . M 4 HOH C 45 445 298 HOH HOH . M 4 HOH C 46 446 279 HOH HOH . M 4 HOH C 47 447 284 HOH HOH . M 4 HOH C 48 448 276 HOH HOH . M 4 HOH C 49 449 287 HOH HOH . M 4 HOH C 50 450 289 HOH HOH . M 4 HOH C 51 451 299 HOH HOH . M 4 HOH C 52 452 300 HOH HOH . M 4 HOH C 53 453 311 HOH HOH . M 4 HOH C 54 454 309 HOH HOH . M 4 HOH C 55 455 265 HOH HOH . M 4 HOH C 56 456 285 HOH HOH . M 4 HOH C 57 457 310 HOH HOH . M 4 HOH C 58 458 269 HOH HOH . M 4 HOH C 59 459 130 HOH HOH . M 4 HOH C 60 460 303 HOH HOH . M 4 HOH C 61 461 304 HOH HOH . N 4 HOH D 1 201 137 HOH HOH . N 4 HOH D 2 202 136 HOH HOH . N 4 HOH D 3 203 134 HOH HOH . N 4 HOH D 4 204 133 HOH HOH . N 4 HOH D 5 205 132 HOH HOH . N 4 HOH D 6 206 124 HOH HOH . N 4 HOH D 7 207 128 HOH HOH . N 4 HOH D 8 208 126 HOH HOH . N 4 HOH D 9 209 127 HOH HOH . N 4 HOH D 10 210 125 HOH HOH . N 4 HOH D 11 211 135 HOH HOH . N 4 HOH D 12 212 138 HOH HOH . N 4 HOH D 13 213 122 HOH HOH . N 4 HOH D 14 214 131 HOH HOH . N 4 HOH D 15 215 129 HOH HOH . O 4 HOH E 1 201 120 HOH HOH . O 4 HOH E 2 202 124 HOH HOH . O 4 HOH E 3 203 123 HOH HOH . O 4 HOH E 4 204 121 HOH HOH . O 4 HOH E 5 205 125 HOH HOH . O 4 HOH E 6 206 126 HOH HOH . P 4 HOH F 1 401 253 HOH HOH . P 4 HOH F 2 402 258 HOH HOH . P 4 HOH F 3 403 270 HOH HOH . P 4 HOH F 4 404 271 HOH HOH . P 4 HOH F 5 405 254 HOH HOH . P 4 HOH F 6 406 274 HOH HOH . P 4 HOH F 7 407 256 HOH HOH . P 4 HOH F 8 408 267 HOH HOH . P 4 HOH F 9 409 266 HOH HOH . P 4 HOH F 10 410 265 HOH HOH . P 4 HOH F 11 411 257 HOH HOH . P 4 HOH F 12 412 260 HOH HOH . P 4 HOH F 13 413 261 HOH HOH . P 4 HOH F 14 414 259 HOH HOH . P 4 HOH F 15 415 268 HOH HOH . P 4 HOH F 16 416 255 HOH HOH . P 4 HOH F 17 417 264 HOH HOH . P 4 HOH F 18 418 263 HOH HOH . P 4 HOH F 19 419 262 HOH HOH . P 4 HOH F 20 420 252 HOH HOH . P 4 HOH F 21 421 272 HOH HOH . P 4 HOH F 22 422 269 HOH HOH . P 4 HOH F 23 423 273 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 3 22.631 60.188 66.769 1 40.65 ? P PO4 301 C 1 HETATM 2 O O1 PO4 . . . G 3 23.181 61.316 65.93 1 46.67 ? O1 PO4 301 C 1 HETATM 3 O O2 PO4 . . . G 3 21.51 59.496 66.029 1 43.72 ? O2 PO4 301 C 1 HETATM 4 O O3 PO4 . . . G 3 23.708 59.177 67.082 1 40.21 ? O3 PO4 301 C 1 HETATM 5 O O4 PO4 . . . G 3 22.132 60.781 68.063 1 50.52 ? O4 PO4 301 C 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #