data_8QNS # _model_server_result.job_id vwWrUTfP8-Y4PCQQMCxbwg _model_server_result.datetime_utc '2024-11-16 00:53:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qns # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":702}' # _entry.id 8QNS # _exptl.entry_id 8QNS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QNS _cell.length_a 110.087 _cell.length_b 115.619 _cell.length_c 192.727 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QNS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I,J,Q,U 1 1 B,G,K,L,R 2 1 C,F,M,N,S,V 3 1 D,H,O,P,T 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 L N N ? 4 N N N ? 4 P N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 328 n n PA O2A NAD sing 329 n n PA O5B NAD sing 330 n n PA O3 NAD sing 331 n n O2A HOA2 NAD sing 332 n n O5B C5B NAD sing 333 n n C5B C4B NAD sing 334 n n C5B H51A NAD sing 335 n n C5B H52A NAD sing 336 n n C4B O4B NAD sing 337 n n C4B C3B NAD sing 338 n n C4B H4B NAD sing 339 n n O4B C1B NAD sing 340 n n C3B O3B NAD sing 341 n n C3B C2B NAD sing 342 n n C3B H3B NAD sing 343 n n O3B HO3A NAD sing 344 n n C2B O2B NAD sing 345 n n C2B C1B NAD sing 346 n n C2B H2B NAD sing 347 n n O2B HO2A NAD sing 348 n n C1B N9A NAD sing 349 n n C1B H1B NAD sing 350 n n N9A C8A NAD sing 351 n y N9A C4A NAD sing 352 n y C8A N7A NAD doub 353 n y C8A H8A NAD sing 354 n n N7A C5A NAD sing 355 n y C5A C6A NAD sing 356 n y C5A C4A NAD doub 357 n y C6A N6A NAD sing 358 n n C6A N1A NAD doub 359 n y N6A H61A NAD sing 360 n n N6A H62A NAD sing 361 n n N1A C2A NAD sing 362 n y C2A N3A NAD doub 363 n y C2A H2A NAD sing 364 n n N3A C4A NAD sing 365 n y O3 PN NAD sing 366 n n PN O1N NAD doub 367 n n PN O2N NAD sing 368 n n PN O5D NAD sing 369 n n O5D C5D NAD sing 370 n n C5D C4D NAD sing 371 n n C5D H51N NAD sing 372 n n C5D H52N NAD sing 373 n n C4D O4D NAD sing 374 n n C4D C3D NAD sing 375 n n C4D H4D NAD sing 376 n n O4D C1D NAD sing 377 n n C3D O3D NAD sing 378 n n C3D C2D NAD sing 379 n n C3D H3D NAD sing 380 n n O3D HO3N NAD sing 381 n n C2D O2D NAD sing 382 n n C2D C1D NAD sing 383 n n C2D H2D NAD sing 384 n n O2D HO2N NAD sing 385 n n C1D N1N NAD sing 386 n n C1D H1D NAD sing 387 n n N1N C2N NAD sing 388 n y N1N C6N NAD doub 389 n y C2N C3N NAD doub 390 n y C2N H2N NAD sing 391 n n C3N C7N NAD sing 392 n n C3N C4N NAD sing 393 n y C7N O7N NAD doub 394 n n C7N N7N NAD sing 395 n n N7N H71N NAD sing 396 n n N7N H72N NAD sing 397 n n C4N C5N NAD doub 398 n y C4N H4N NAD sing 399 n n C5N C6N NAD sing 400 n y C5N H5N NAD sing 401 n n C6N H6N NAD sing 402 n n # _atom_sites.entry_id 8QNS _atom_sites.fract_transf_matrix[1][1] 0.009084 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008649 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005189 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 FAD A 1 701 1611 FAD FAD . J 4 NAD A 1 702 700 NAD NAD . K 3 FAD D 1 701 1611 FAD FAD . L 4 NAD D 1 702 700 NAD NAD . M 3 FAD G 1 701 1611 FAD FAD . N 4 NAD G 1 702 700 NAD NAD . O 3 FAD J 1 701 1611 FAD FAD . P 4 NAD J 1 702 700 NAD NAD . Q 5 HOH A 1 801 160 HOH HOH . Q 5 HOH A 2 802 180 HOH HOH . Q 5 HOH A 3 803 30 HOH HOH . Q 5 HOH A 4 804 282 HOH HOH . Q 5 HOH A 5 805 123 HOH HOH . Q 5 HOH A 6 806 244 HOH HOH . Q 5 HOH A 7 807 110 HOH HOH . Q 5 HOH A 8 808 59 HOH HOH . Q 5 HOH A 9 809 121 HOH HOH . Q 5 HOH A 10 810 243 HOH HOH . Q 5 HOH A 11 811 4 HOH HOH . Q 5 HOH A 12 812 212 HOH HOH . Q 5 HOH A 13 813 102 HOH HOH . Q 5 HOH A 14 814 205 HOH HOH . Q 5 HOH A 15 815 185 HOH HOH . Q 5 HOH A 16 816 135 HOH HOH . Q 5 HOH A 17 817 80 HOH HOH . Q 5 HOH A 18 818 294 HOH HOH . Q 5 HOH A 19 819 153 HOH HOH . Q 5 HOH A 20 820 53 HOH HOH . Q 5 HOH A 21 821 3 HOH HOH . Q 5 HOH A 22 822 263 HOH HOH . Q 5 HOH A 23 823 155 HOH HOH . Q 5 HOH A 24 824 287 HOH HOH . Q 5 HOH A 25 825 158 HOH HOH . Q 5 HOH A 26 826 290 HOH HOH . R 5 HOH D 1 801 136 HOH HOH . R 5 HOH D 2 802 225 HOH HOH . R 5 HOH D 3 803 127 HOH HOH . R 5 HOH D 4 804 220 HOH HOH . R 5 HOH D 5 805 60 HOH HOH . R 5 HOH D 6 806 173 HOH HOH . R 5 HOH D 7 807 134 HOH HOH . R 5 HOH D 8 808 291 HOH HOH . R 5 HOH D 9 809 14 HOH HOH . R 5 HOH D 10 810 119 HOH HOH . R 5 HOH D 11 811 221 HOH HOH . R 5 HOH D 12 812 93 HOH HOH . R 5 HOH D 13 813 58 HOH HOH . R 5 HOH D 14 814 66 HOH HOH . R 5 HOH D 15 815 169 HOH HOH . R 5 HOH D 16 816 57 HOH HOH . R 5 HOH D 17 817 107 HOH HOH . R 5 HOH D 18 818 129 HOH HOH . R 5 HOH D 19 819 286 HOH HOH . R 5 HOH D 20 820 162 HOH HOH . S 5 HOH G 1 801 295 HOH HOH . S 5 HOH G 2 802 206 HOH HOH . S 5 HOH G 3 803 33 HOH HOH . S 5 HOH G 4 804 194 HOH HOH . S 5 HOH G 5 805 49 HOH HOH . S 5 HOH G 6 806 258 HOH HOH . S 5 HOH G 7 807 118 HOH HOH . S 5 HOH G 8 808 112 HOH HOH . S 5 HOH G 9 809 177 HOH HOH . S 5 HOH G 10 810 183 HOH HOH . S 5 HOH G 11 811 63 HOH HOH . S 5 HOH G 12 812 250 HOH HOH . S 5 HOH G 13 813 252 HOH HOH . S 5 HOH G 14 814 133 HOH HOH . S 5 HOH G 15 815 176 HOH HOH . S 5 HOH G 16 816 76 HOH HOH . S 5 HOH G 17 817 50 HOH HOH . S 5 HOH G 18 818 18 HOH HOH . S 5 HOH G 19 819 156 HOH HOH . S 5 HOH G 20 820 283 HOH HOH . S 5 HOH G 21 821 292 HOH HOH . T 5 HOH J 1 801 148 HOH HOH . T 5 HOH J 2 802 39 HOH HOH . T 5 HOH J 3 803 273 HOH HOH . T 5 HOH J 4 804 237 HOH HOH . T 5 HOH J 5 805 101 HOH HOH . T 5 HOH J 6 806 238 HOH HOH . T 5 HOH J 7 807 276 HOH HOH . T 5 HOH J 8 808 231 HOH HOH . T 5 HOH J 9 809 254 HOH HOH . T 5 HOH J 10 810 200 HOH HOH . T 5 HOH J 11 811 218 HOH HOH . T 5 HOH J 12 812 190 HOH HOH . T 5 HOH J 13 813 166 HOH HOH . T 5 HOH J 14 814 213 HOH HOH . U 5 HOH M 1 101 293 HOH HOH . U 5 HOH M 2 102 165 HOH HOH . U 5 HOH M 3 103 215 HOH HOH . V 5 HOH N 1 101 124 HOH HOH . V 5 HOH N 2 102 297 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . N 4 -53.889 10.446 50.727 1 61.75 0 PA NAD 702 G 1 HETATM 2 O O1A NAD . . . N 4 -53.879 9.716 49.417 1 61.75 0 O1A NAD 702 G 1 HETATM 3 O O2A NAD . . . N 4 -52.828 11.445 51.069 1 61.75 0 O2A NAD 702 G 1 HETATM 4 O O5B NAD . . . N 4 -53.961 9.348 51.875 1 61.75 0 O5B NAD 702 G 1 HETATM 5 C C5B NAD . . . N 4 -54.87 8.26 51.622 1 61.75 0 C5B NAD 702 G 1 HETATM 6 C C4B NAD . . . N 4 -54.901 7.397 52.852 1 61.75 0 C4B NAD 702 G 1 HETATM 7 O O4B NAD . . . N 4 -56.187 6.749 52.973 1 61.75 0 O4B NAD 702 G 1 HETATM 8 C C3B NAD . . . N 4 -53.909 6.235 52.871 1 61.75 0 C3B NAD 702 G 1 HETATM 9 O O3B NAD . . . N 4 -52.594 6.696 53.165 1 61.75 0 O3B NAD 702 G 1 HETATM 10 C C2B NAD . . . N 4 -54.532 5.345 53.951 1 61.75 0 C2B NAD 702 G 1 HETATM 11 O O2B NAD . . . N 4 -54.02 5.614 55.24 1 61.75 0 O2B NAD 702 G 1 HETATM 12 C C1B NAD . . . N 4 -56.032 5.659 53.846 1 61.75 0 C1B NAD 702 G 1 HETATM 13 N N9A NAD . . . N 4 -56.823 4.543 53.342 1 61.75 0 N9A NAD 702 G 1 HETATM 14 C C8A NAD . . . N 4 -56.502 3.688 52.312 1 61.75 0 C8A NAD 702 G 1 HETATM 15 N N7A NAD . . . N 4 -57.393 2.748 52.123 1 61.75 0 N7A NAD 702 G 1 HETATM 16 C C5A NAD . . . N 4 -58.359 2.992 53.091 1 61.75 0 C5A NAD 702 G 1 HETATM 17 C C6A NAD . . . N 4 -59.566 2.342 53.412 1 61.75 0 C6A NAD 702 G 1 HETATM 18 N N6A NAD . . . N 4 -60.019 1.276 52.759 1 61.75 0 N6A NAD 702 G 1 HETATM 19 N N1A NAD . . . N 4 -60.296 2.841 54.441 1 61.75 0 N1A NAD 702 G 1 HETATM 20 C C2A NAD . . . N 4 -59.834 3.915 55.093 1 61.75 0 C2A NAD 702 G 1 HETATM 21 N N3A NAD . . . N 4 -58.717 4.606 54.881 1 61.75 0 N3A NAD 702 G 1 HETATM 22 C C4A NAD . . . N 4 -58.018 4.094 53.852 1 61.75 0 C4A NAD 702 G 1 HETATM 23 O O3 NAD . . . N 4 -55.309 11.188 50.892 1 61.75 0 O3 NAD 702 G 1 HETATM 24 P PN NAD . . . N 4 -55.855 12.403 51.797 1 61.75 0 PN NAD 702 G 1 HETATM 25 O O1N NAD . . . N 4 -55.246 12.184 53.144 1 61.75 0 O1N NAD 702 G 1 HETATM 26 O O2N NAD . . . N 4 -57.351 12.514 51.696 1 61.75 0 O2N NAD 702 G 1 HETATM 27 O O5D NAD . . . N 4 -55.174 13.682 51.089 1 61.75 0 O5D NAD 702 G 1 HETATM 28 C C5D NAD . . . N 4 -55.983 14.701 50.426 1 61.75 0 C5D NAD 702 G 1 HETATM 29 C C4D NAD . . . N 4 -55.323 15.137 49.132 1 61.75 0 C4D NAD 702 G 1 HETATM 30 O O4D NAD . . . N 4 -54.578 16.352 49.351 1 61.75 0 O4D NAD 702 G 1 HETATM 31 C C3D NAD . . . N 4 -54.325 14.174 48.457 1 61.75 0 C3D NAD 702 G 1 HETATM 32 O O3D NAD . . . N 4 -54.324 14.288 47.04 1 61.75 0 O3D NAD 702 G 1 HETATM 33 C C2D NAD . . . N 4 -52.957 14.64 48.962 1 61.75 0 C2D NAD 702 G 1 HETATM 34 O O2D NAD . . . N 4 -51.924 14.374 48.023 1 61.75 0 O2D NAD 702 G 1 HETATM 35 C C1D NAD . . . N 4 -53.184 16.149 49.106 1 61.75 0 C1D NAD 702 G 1 HETATM 36 N N1N NAD . . . N 4 -52.412 16.733 50.232 1 61.75 0 N1N NAD 702 G 1 HETATM 37 C C2N NAD . . . N 4 -51.044 16.843 50.127 1 61.75 0 C2N NAD 702 G 1 HETATM 38 C C3N NAD . . . N 4 -50.305 17.352 51.191 1 61.75 0 C3N NAD 702 G 1 HETATM 39 C C7N NAD . . . N 4 -48.821 17.471 51.038 1 61.75 0 C7N NAD 702 G 1 HETATM 40 O O7N NAD . . . N 4 -48.294 17.279 49.929 1 61.75 0 O7N NAD 702 G 1 HETATM 41 N N7N NAD . . . N 4 -48.108 17.766 52.117 1 61.75 0 N7N NAD 702 G 1 HETATM 42 C C4N NAD . . . N 4 -50.948 17.771 52.347 1 61.75 0 C4N NAD 702 G 1 HETATM 43 C C5N NAD . . . N 4 -52.322 17.659 52.442 1 61.75 0 C5N NAD 702 G 1 HETATM 44 C C6N NAD . . . N 4 -53.045 17.139 51.387 1 61.75 0 C6N NAD 702 G 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 44 #