data_8QOV
#
_model_server_result.job_id            x8Djfw2-g3DxTvdOt_qzLg 
_model_server_result.datetime_utc      '2024-11-14 19:35:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qov 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    8QOV 
#
_exptl.entry_id    8QOV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8QOV 
_cell.length_a            88.746 
_cell.length_b            88.746 
_cell.length_c            88.746 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QOV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        198 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_454 -z-1/2,-x,y-1/2 0 0 -1 -1 0 0 0 1 0 -44.373 0 -44.373 
3 'crystal symmetry operation' 10_554 -y,z+1/2,-x-1/2 0 -1 0 0 0 1 -1 0 0 0 44.373 -44.373 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A N GLY 1 A GLY -2 1_555 C NI NI . A NI 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc2 A N SER 2 A SER -1 1_555 C NI NI . A NI 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? 
metalc ? metalc3 A N HIS 3 A HIS 0 1_555 C NI NI . A NI 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc4 A ND1 HIS 3 A HIS 0 1_555 C NI NI . A NI 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8QOV 
_atom_sites.fract_transf_matrix[1][1]    0.011268 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011268 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011268 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NI A 1 501 501 NI NI . 
D 3 EDO B 1 201 201 EDO EDO . 
E 4 PEG B 1 202 201 PEG PEG . 
F 5 HOH A 1 601 19 HOH HOH . 
F 5 HOH A 2 602 84 HOH HOH . 
F 5 HOH A 3 603 80 HOH HOH . 
F 5 HOH A 4 604 100 HOH HOH . 
F 5 HOH A 5 605 69 HOH HOH . 
F 5 HOH A 6 606 8 HOH HOH . 
F 5 HOH A 7 607 71 HOH HOH . 
F 5 HOH A 8 608 20 HOH HOH . 
F 5 HOH A 9 609 34 HOH HOH . 
F 5 HOH A 10 610 29 HOH HOH . 
F 5 HOH A 11 611 101 HOH HOH . 
F 5 HOH A 12 612 123 HOH HOH . 
F 5 HOH A 13 613 6 HOH HOH . 
F 5 HOH A 14 614 5 HOH HOH . 
F 5 HOH A 15 615 60 HOH HOH . 
F 5 HOH A 16 616 55 HOH HOH . 
F 5 HOH A 17 617 9 HOH HOH . 
F 5 HOH A 18 618 112 HOH HOH . 
F 5 HOH A 19 619 136 HOH HOH . 
F 5 HOH A 20 620 119 HOH HOH . 
F 5 HOH A 21 621 39 HOH HOH . 
F 5 HOH A 22 622 22 HOH HOH . 
F 5 HOH A 23 623 121 HOH HOH . 
F 5 HOH A 24 624 21 HOH HOH . 
F 5 HOH A 25 625 127 HOH HOH . 
F 5 HOH A 26 626 94 HOH HOH . 
F 5 HOH A 27 627 38 HOH HOH . 
F 5 HOH A 28 628 79 HOH HOH . 
F 5 HOH A 29 629 126 HOH HOH . 
F 5 HOH A 30 630 12 HOH HOH . 
F 5 HOH A 31 631 125 HOH HOH . 
F 5 HOH A 32 632 68 HOH HOH . 
F 5 HOH A 33 633 137 HOH HOH . 
F 5 HOH A 34 634 27 HOH HOH . 
F 5 HOH A 35 635 70 HOH HOH . 
F 5 HOH A 36 636 35 HOH HOH . 
F 5 HOH A 37 637 54 HOH HOH . 
F 5 HOH A 38 638 72 HOH HOH . 
F 5 HOH A 39 639 97 HOH HOH . 
F 5 HOH A 40 640 46 HOH HOH . 
F 5 HOH A 41 641 24 HOH HOH . 
F 5 HOH A 42 642 50 HOH HOH . 
F 5 HOH A 43 643 103 HOH HOH . 
F 5 HOH A 44 644 59 HOH HOH . 
F 5 HOH A 45 645 135 HOH HOH . 
F 5 HOH A 46 646 45 HOH HOH . 
F 5 HOH A 47 647 124 HOH HOH . 
F 5 HOH A 48 648 99 HOH HOH . 
F 5 HOH A 49 649 93 HOH HOH . 
F 5 HOH A 50 650 62 HOH HOH . 
F 5 HOH A 51 651 23 HOH HOH . 
F 5 HOH A 52 652 43 HOH HOH . 
F 5 HOH A 53 653 61 HOH HOH . 
F 5 HOH A 54 654 76 HOH HOH . 
F 5 HOH A 55 655 90 HOH HOH . 
F 5 HOH A 56 656 118 HOH HOH . 
F 5 HOH A 57 657 81 HOH HOH . 
F 5 HOH A 58 658 48 HOH HOH . 
F 5 HOH A 59 659 133 HOH HOH . 
F 5 HOH A 60 660 139 HOH HOH . 
F 5 HOH A 61 661 49 HOH HOH . 
F 5 HOH A 62 662 82 HOH HOH . 
F 5 HOH A 63 663 107 HOH HOH . 
F 5 HOH A 64 664 117 HOH HOH . 
F 5 HOH A 65 665 143 HOH HOH . 
F 5 HOH A 66 666 120 HOH HOH . 
F 5 HOH A 67 667 140 HOH HOH . 
F 5 HOH A 68 668 105 HOH HOH . 
F 5 HOH A 69 669 26 HOH HOH . 
F 5 HOH A 70 670 148 HOH HOH . 
F 5 HOH A 71 671 108 HOH HOH . 
F 5 HOH A 72 672 78 HOH HOH . 
F 5 HOH A 73 673 122 HOH HOH . 
F 5 HOH A 74 674 53 HOH HOH . 
F 5 HOH A 75 675 106 HOH HOH . 
F 5 HOH A 76 676 138 HOH HOH . 
F 5 HOH A 77 677 132 HOH HOH . 
F 5 HOH A 78 678 15 HOH HOH . 
F 5 HOH A 79 679 141 HOH HOH . 
G 5 HOH B 1 301 41 HOH HOH . 
G 5 HOH B 2 302 130 HOH HOH . 
G 5 HOH B 3 303 109 HOH HOH . 
G 5 HOH B 4 304 110 HOH HOH . 
G 5 HOH B 5 305 83 HOH HOH . 
G 5 HOH B 6 306 91 HOH HOH . 
G 5 HOH B 7 307 16 HOH HOH . 
G 5 HOH B 8 308 87 HOH HOH . 
G 5 HOH B 9 309 96 HOH HOH . 
G 5 HOH B 10 310 64 HOH HOH . 
G 5 HOH B 11 311 57 HOH HOH . 
G 5 HOH B 12 312 75 HOH HOH . 
G 5 HOH B 13 313 36 HOH HOH . 
G 5 HOH B 14 314 7 HOH HOH . 
G 5 HOH B 15 315 88 HOH HOH . 
G 5 HOH B 16 316 92 HOH HOH . 
G 5 HOH B 17 317 17 HOH HOH . 
G 5 HOH B 18 318 52 HOH HOH . 
G 5 HOH B 19 319 31 HOH HOH . 
G 5 HOH B 20 320 2 HOH HOH . 
G 5 HOH B 21 321 30 HOH HOH . 
G 5 HOH B 22 322 18 HOH HOH . 
G 5 HOH B 23 323 147 HOH HOH . 
G 5 HOH B 24 324 65 HOH HOH . 
G 5 HOH B 25 325 95 HOH HOH . 
G 5 HOH B 26 326 10 HOH HOH . 
G 5 HOH B 27 327 51 HOH HOH . 
G 5 HOH B 28 328 129 HOH HOH . 
G 5 HOH B 29 329 44 HOH HOH . 
G 5 HOH B 30 330 3 HOH HOH . 
G 5 HOH B 31 331 11 HOH HOH . 
G 5 HOH B 32 332 145 HOH HOH . 
G 5 HOH B 33 333 85 HOH HOH . 
G 5 HOH B 34 334 47 HOH HOH . 
G 5 HOH B 35 335 4 HOH HOH . 
G 5 HOH B 36 336 32 HOH HOH . 
G 5 HOH B 37 337 63 HOH HOH . 
G 5 HOH B 38 338 28 HOH HOH . 
G 5 HOH B 39 339 77 HOH HOH . 
G 5 HOH B 40 340 14 HOH HOH . 
G 5 HOH B 41 341 111 HOH HOH . 
G 5 HOH B 42 342 114 HOH HOH . 
G 5 HOH B 43 343 104 HOH HOH . 
G 5 HOH B 44 344 73 HOH HOH . 
G 5 HOH B 45 345 25 HOH HOH . 
G 5 HOH B 46 346 13 HOH HOH . 
G 5 HOH B 47 347 33 HOH HOH . 
G 5 HOH B 48 348 134 HOH HOH . 
G 5 HOH B 49 349 146 HOH HOH . 
G 5 HOH B 50 350 67 HOH HOH . 
G 5 HOH B 51 351 113 HOH HOH . 
G 5 HOH B 52 352 37 HOH HOH . 
G 5 HOH B 53 353 42 HOH HOH . 
G 5 HOH B 54 354 142 HOH HOH . 
G 5 HOH B 55 355 58 HOH HOH . 
G 5 HOH B 56 356 40 HOH HOH . 
G 5 HOH B 57 357 98 HOH HOH . 
G 5 HOH B 58 358 128 HOH HOH . 
G 5 HOH B 59 359 56 HOH HOH . 
G 5 HOH B 60 360 131 HOH HOH . 
G 5 HOH B 61 361 144 HOH HOH . 
G 5 HOH B 62 362 1 HOH HOH . 
G 5 HOH B 63 363 74 HOH HOH . 
G 5 HOH B 64 364 115 HOH HOH . 
G 5 HOH B 65 365 116 HOH HOH . 
G 5 HOH B 66 366 89 HOH HOH . 
G 5 HOH B 67 367 86 HOH HOH . 
G 5 HOH B 68 368 66 HOH HOH . 
G 5 HOH B 69 369 102 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 3 -20.819 5.257 -16.46 0.63 40.09 ? C1 EDO 201 B 1 
HETATM 2 O O1 EDO . . . D 3 -19.578 5.821 -16.213 0.63 43.67 ? O1 EDO 201 B 1 
HETATM 3 C C2 EDO . . . D 3 -21.051 5.146 -17.861 0.63 36.02 ? C2 EDO 201 B 1 
HETATM 4 O O2 EDO . . . D 3 -22.333 5.428 -18.221 0.63 36.06 ? O2 EDO 201 B 1 
HETATM 5 H H11 EDO . . . D 3 -21.516 5.82 -16.066 0.63 39.65 ? H11 EDO 201 B 1 
HETATM 6 H H12 EDO . . . D 3 -20.868 4.37 -16.048 0.63 40.67 ? H12 EDO 201 B 1 
HETATM 7 H HO1 EDO . . . D 3 -19.488 5.88 -15.371 0 43.93 ? HO1 EDO 201 B 1 
HETATM 8 H H21 EDO . . . D 3 -20.828 4.236 -18.144 0.63 37.67 ? H21 EDO 201 B 1 
HETATM 9 H H22 EDO . . . D 3 -20.457 5.763 -18.328 0.63 36.64 ? H22 EDO 201 B 1 
HETATM 10 H HO2 EDO . . . D 3 -22.833 4.778 -18.012 0.63 36.3 ? HO2 EDO 201 B 1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#