data_8QSK
#
_model_server_result.job_id            mKY0ECjstBxoPS6qm9GHbQ 
_model_server_result.datetime_utc      '2024-10-20 03:32:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qsk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":601}' 
#
_entry.id    8QSK 
#
_exptl.entry_id    8QSK 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8QSK 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QSK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 68 A CYS 68 1_555 A SG CYS 141 A CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 133 A CYS 133 1_555 A SG CYS 153 A CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 B SG CYS 68 C CYS 68 1_555 B SG CYS 141 C CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 133 C CYS 133 1_555 B SG CYS 153 C CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
covale ? covale1 A ND2 ASN 140 A ASN 140 1_555 E C1 NAG . A NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale2 B ND2 ASN 140 C ASN 140 1_555 N C1 NAG . C NAG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 533 n n 
CBA CAB Y01 sing 534 n n 
CBA CAN Y01 sing 535 n n 
CAN CAJ Y01 sing 536 n n 
CAJ CAO Y01 sing 537 n n 
CAO CBB Y01 sing 538 n n 
CBB CAC Y01 sing 539 n n 
CBB CBE Y01 sing 540 n n 
CBE CAP Y01 sing 541 n n 
CBE CBI Y01 sing 542 n n 
CAP CAQ Y01 sing 543 n n 
CAQ CBG Y01 sing 544 n n 
CBG CBI Y01 sing 545 n n 
CBG CBD Y01 sing 546 n n 
CBI CAE Y01 sing 547 n n 
CBI CAU Y01 sing 548 n n 
CAU CAS Y01 sing 549 n n 
CAS CBF Y01 sing 550 n n 
CBF CBD Y01 sing 551 n n 
CBF CBH Y01 sing 552 n n 
CBD CAK Y01 sing 553 n n 
CAK CAI Y01 sing 554 n n 
CAI CAZ Y01 doub 555 n n 
CAZ CAV Y01 sing 556 n n 
CAZ CBH Y01 sing 557 n n 
CAV CBC Y01 sing 558 n n 
CBH CAD Y01 sing 559 n n 
CBH CAT Y01 sing 560 n n 
CAT CAR Y01 sing 561 n n 
CAR CBC Y01 sing 562 n n 
CBC OAW Y01 sing 563 n n 
OAW CAY Y01 sing 564 n n 
CAY OAG Y01 doub 565 n n 
CAY CAM Y01 sing 566 n n 
CAM CAL Y01 sing 567 n n 
CAL CAX Y01 sing 568 n n 
CAX OAH Y01 sing 569 n n 
CAX OAF Y01 doub 570 n n 
CAA HAA1 Y01 sing 571 n n 
CAA HAA2 Y01 sing 572 n n 
CAA HAA3 Y01 sing 573 n n 
CBA HBA Y01 sing 574 n n 
CAB HAB1 Y01 sing 575 n n 
CAB HAB2 Y01 sing 576 n n 
CAB HAB3 Y01 sing 577 n n 
CAN HAN1 Y01 sing 578 n n 
CAN HAN2 Y01 sing 579 n n 
CAJ HAJ1 Y01 sing 580 n n 
CAJ HAJ2 Y01 sing 581 n n 
CAO HAO1 Y01 sing 582 n n 
CAO HAO2 Y01 sing 583 n n 
CBB HBB Y01 sing 584 n n 
CAC HAC1 Y01 sing 585 n n 
CAC HAC2 Y01 sing 586 n n 
CAC HAC3 Y01 sing 587 n n 
CBE HBE Y01 sing 588 n n 
CAP HAP1 Y01 sing 589 n n 
CAP HAP2 Y01 sing 590 n n 
CAQ HAQ1 Y01 sing 591 n n 
CAQ HAQ2 Y01 sing 592 n n 
CBG HBG Y01 sing 593 n n 
CBD HBD Y01 sing 594 n n 
CAE HAE1 Y01 sing 595 n n 
CAE HAE2 Y01 sing 596 n n 
CAE HAE3 Y01 sing 597 n n 
CAU HAU1 Y01 sing 598 n n 
CAU HAU2 Y01 sing 599 n n 
CAS HAS1 Y01 sing 600 n n 
CAS HAS2 Y01 sing 601 n n 
CBF HBF Y01 sing 602 n n 
CAK HAK1 Y01 sing 603 n n 
CAK HAK2 Y01 sing 604 n n 
CAI HAI Y01 sing 605 n n 
CAV HAV1 Y01 sing 606 n n 
CAV HAV2 Y01 sing 607 n n 
CBC HBC Y01 sing 608 n n 
CAD HAD1 Y01 sing 609 n n 
CAD HAD2 Y01 sing 610 n n 
CAD HAD3 Y01 sing 611 n n 
CAT HAT1 Y01 sing 612 n n 
CAT HAT2 Y01 sing 613 n n 
CAR HAR1 Y01 sing 614 n n 
CAR HAR2 Y01 sing 615 n n 
CAM HAM1 Y01 sing 616 n n 
CAM HAM2 Y01 sing 617 n n 
CAL HAL1 Y01 sing 618 n n 
CAL HAL2 Y01 sing 619 n n 
OAH HAH Y01 sing 620 n n 
#
_atom_sites.entry_id                     8QSK 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 Y01 A 1 601 601 Y01 Y01 . 
D 2 Y01 A 1 602 603 Y01 Y01 . 
E 3 NAG A 1 603 604 NAG NAG . 
F 2 Y01 A 1 604 605 Y01 Y01 . 
G 2 Y01 A 1 605 606 Y01 Y01 . 
H 2 Y01 A 1 606 607 Y01 Y01 . 
I 4 PGT A 1 607 609 PGT PGT . 
J 2 Y01 A 1 608 602 Y01 Y01 . 
K 2 Y01 C 1 601 602 Y01 Y01 . 
L 2 Y01 C 1 602 601 Y01 Y01 . 
M 2 Y01 C 1 603 603 Y01 Y01 . 
N 3 NAG C 1 604 604 NAG NAG . 
O 2 Y01 C 1 605 605 Y01 Y01 . 
P 2 Y01 C 1 606 606 Y01 Y01 . 
Q 2 Y01 C 1 607 607 Y01 Y01 . 
R 4 PGT C 1 608 609 PGT PGT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . K 2 130.094 139.545 126.595 1 106.32 ? CAA Y01 601 C 1 
HETATM 2 C CBA Y01 . . . K 2 129.426 138.31 127.178 1 108.24 ? CBA Y01 601 C 1 
HETATM 3 C CAB Y01 . . . K 2 129.268 137.248 126.103 1 102.55 ? CAB Y01 601 C 1 
HETATM 4 C CAN Y01 . . . K 2 128.078 138.657 127.812 1 114.93 ? CAN Y01 601 C 1 
HETATM 5 C CAJ Y01 . . . K 2 127.506 137.62 128.748 1 110.71 ? CAJ Y01 601 C 1 
HETATM 6 C CAO Y01 . . . K 2 128.297 137.483 130.023 1 109.48 ? CAO Y01 601 C 1 
HETATM 7 C CBB Y01 . . . K 2 127.618 136.687 131.147 1 110.38 ? CBB Y01 601 C 1 
HETATM 8 C CAC Y01 . . . K 2 128.028 135.218 131.094 1 107 ? CAC Y01 601 C 1 
HETATM 9 C CBE Y01 . . . K 2 127.915 137.347 132.504 1 111.33 ? CBE Y01 601 C 1 
HETATM 10 C CAP Y01 . . . K 2 127.723 138.887 132.436 1 118.68 ? CAP Y01 601 C 1 
HETATM 11 C CAQ Y01 . . . K 2 126.934 139.296 133.69 1 125.47 ? CAQ Y01 601 C 1 
HETATM 12 C CBG Y01 . . . K 2 127.244 138.156 134.649 1 123.42 ? CBG Y01 601 C 1 
HETATM 13 C CBI Y01 . . . K 2 127.115 136.901 133.767 1 114.69 ? CBI Y01 601 C 1 
HETATM 14 C CAE Y01 . . . K 2 125.652 136.621 133.385 1 114.9 ? CAE Y01 601 C 1 
HETATM 15 C CAU Y01 . . . K 2 127.696 135.74 134.581 1 110.98 ? CAU Y01 601 C 1 
HETATM 16 C CAS Y01 . . . K 2 126.984 135.586 135.93 1 117.36 ? CAS Y01 601 C 1 
HETATM 17 C CBF Y01 . . . K 2 126.989 136.87 136.776 1 124.99 ? CBF Y01 601 C 1 
HETATM 18 C CBD Y01 . . . K 2 126.499 138.089 135.973 1 126.46 ? CBD Y01 601 C 1 
HETATM 19 C CAK Y01 . . . K 2 126.723 139.37 136.769 1 130.1 ? CAK Y01 601 C 1 
HETATM 20 C CAI Y01 . . . K 2 126.45 139.205 138.229 1 135.63 ? CAI Y01 601 C 1 
HETATM 21 C CAZ Y01 . . . K 2 126.121 138.065 138.815 1 135.34 ? CAZ Y01 601 C 1 
HETATM 22 C CAV Y01 . . . K 2 125.667 138.04 140.258 1 136.55 ? CAV Y01 601 C 1 
HETATM 23 C CBH Y01 . . . K 2 126.232 136.71 138.124 1 127.69 ? CBH Y01 601 C 1 
HETATM 24 C CAD Y01 . . . K 2 124.811 136.155 137.923 1 124.6 ? CAD Y01 601 C 1 
HETATM 25 C CAT Y01 . . . K 2 127.033 135.763 139.046 1 123.56 ? CAT Y01 601 C 1 
HETATM 26 C CAR Y01 . . . K 2 126.545 135.752 140.496 1 129.48 ? CAR Y01 601 C 1 
HETATM 27 C CBC Y01 . . . K 2 126.556 137.139 141.081 1 135.98 ? CBC Y01 601 C 1 
HETATM 28 O OAW Y01 . . . K 2 126.05 137.123 142.45 1 139.87 ? OAW Y01 601 C 1 
HETATM 29 C CAY Y01 . . . K 2 124.742 136.987 142.658 1 141.55 ? CAY Y01 601 C 1 
HETATM 30 O OAG Y01 . . . K 2 124.1 136.045 142.294 1 142.23 ? OAG Y01 601 C 1 
HETATM 31 C CAM Y01 . . . K 2 124.17 138.157 143.416 1 141.84 ? CAM Y01 601 C 1 
HETATM 32 C CAL Y01 . . . K 2 123.067 138.923 142.715 1 139.68 ? CAL Y01 601 C 1 
HETATM 33 C CAX Y01 . . . K 2 122.641 140.214 143.391 1 136.26 ? CAX Y01 601 C 1 
HETATM 34 O OAH Y01 . . . K 2 123.494 141.111 143.536 1 134.86 ? OAH Y01 601 C 1 
HETATM 35 O OAF Y01 . . . K 2 121.456 140.321 143.766 1 129.89 ? OAF Y01 601 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           35 
#