data_8QSK
#
_model_server_result.job_id            bTz18uwZIKLDizd8D-38hg 
_model_server_result.datetime_utc      '2024-10-20 03:53:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qsk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":605}' 
#
_entry.id    8QSK 
#
_exptl.entry_id    8QSK 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8QSK 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QSK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 68 A CYS 68 1_555 A SG CYS 141 A CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 133 A CYS 133 1_555 A SG CYS 153 A CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 B SG CYS 68 C CYS 68 1_555 B SG CYS 141 C CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 133 C CYS 133 1_555 B SG CYS 153 C CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
covale ? covale1 A ND2 ASN 140 A ASN 140 1_555 E C1 NAG . A NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale2 B ND2 ASN 140 C ASN 140 1_555 N C1 NAG . C NAG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 533 n n 
CBA CAB Y01 sing 534 n n 
CBA CAN Y01 sing 535 n n 
CAN CAJ Y01 sing 536 n n 
CAJ CAO Y01 sing 537 n n 
CAO CBB Y01 sing 538 n n 
CBB CAC Y01 sing 539 n n 
CBB CBE Y01 sing 540 n n 
CBE CAP Y01 sing 541 n n 
CBE CBI Y01 sing 542 n n 
CAP CAQ Y01 sing 543 n n 
CAQ CBG Y01 sing 544 n n 
CBG CBI Y01 sing 545 n n 
CBG CBD Y01 sing 546 n n 
CBI CAE Y01 sing 547 n n 
CBI CAU Y01 sing 548 n n 
CAU CAS Y01 sing 549 n n 
CAS CBF Y01 sing 550 n n 
CBF CBD Y01 sing 551 n n 
CBF CBH Y01 sing 552 n n 
CBD CAK Y01 sing 553 n n 
CAK CAI Y01 sing 554 n n 
CAI CAZ Y01 doub 555 n n 
CAZ CAV Y01 sing 556 n n 
CAZ CBH Y01 sing 557 n n 
CAV CBC Y01 sing 558 n n 
CBH CAD Y01 sing 559 n n 
CBH CAT Y01 sing 560 n n 
CAT CAR Y01 sing 561 n n 
CAR CBC Y01 sing 562 n n 
CBC OAW Y01 sing 563 n n 
OAW CAY Y01 sing 564 n n 
CAY OAG Y01 doub 565 n n 
CAY CAM Y01 sing 566 n n 
CAM CAL Y01 sing 567 n n 
CAL CAX Y01 sing 568 n n 
CAX OAH Y01 sing 569 n n 
CAX OAF Y01 doub 570 n n 
CAA HAA1 Y01 sing 571 n n 
CAA HAA2 Y01 sing 572 n n 
CAA HAA3 Y01 sing 573 n n 
CBA HBA Y01 sing 574 n n 
CAB HAB1 Y01 sing 575 n n 
CAB HAB2 Y01 sing 576 n n 
CAB HAB3 Y01 sing 577 n n 
CAN HAN1 Y01 sing 578 n n 
CAN HAN2 Y01 sing 579 n n 
CAJ HAJ1 Y01 sing 580 n n 
CAJ HAJ2 Y01 sing 581 n n 
CAO HAO1 Y01 sing 582 n n 
CAO HAO2 Y01 sing 583 n n 
CBB HBB Y01 sing 584 n n 
CAC HAC1 Y01 sing 585 n n 
CAC HAC2 Y01 sing 586 n n 
CAC HAC3 Y01 sing 587 n n 
CBE HBE Y01 sing 588 n n 
CAP HAP1 Y01 sing 589 n n 
CAP HAP2 Y01 sing 590 n n 
CAQ HAQ1 Y01 sing 591 n n 
CAQ HAQ2 Y01 sing 592 n n 
CBG HBG Y01 sing 593 n n 
CBD HBD Y01 sing 594 n n 
CAE HAE1 Y01 sing 595 n n 
CAE HAE2 Y01 sing 596 n n 
CAE HAE3 Y01 sing 597 n n 
CAU HAU1 Y01 sing 598 n n 
CAU HAU2 Y01 sing 599 n n 
CAS HAS1 Y01 sing 600 n n 
CAS HAS2 Y01 sing 601 n n 
CBF HBF Y01 sing 602 n n 
CAK HAK1 Y01 sing 603 n n 
CAK HAK2 Y01 sing 604 n n 
CAI HAI Y01 sing 605 n n 
CAV HAV1 Y01 sing 606 n n 
CAV HAV2 Y01 sing 607 n n 
CBC HBC Y01 sing 608 n n 
CAD HAD1 Y01 sing 609 n n 
CAD HAD2 Y01 sing 610 n n 
CAD HAD3 Y01 sing 611 n n 
CAT HAT1 Y01 sing 612 n n 
CAT HAT2 Y01 sing 613 n n 
CAR HAR1 Y01 sing 614 n n 
CAR HAR2 Y01 sing 615 n n 
CAM HAM1 Y01 sing 616 n n 
CAM HAM2 Y01 sing 617 n n 
CAL HAL1 Y01 sing 618 n n 
CAL HAL2 Y01 sing 619 n n 
OAH HAH Y01 sing 620 n n 
#
_atom_sites.entry_id                     8QSK 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 Y01 A 1 601 601 Y01 Y01 . 
D 2 Y01 A 1 602 603 Y01 Y01 . 
E 3 NAG A 1 603 604 NAG NAG . 
F 2 Y01 A 1 604 605 Y01 Y01 . 
G 2 Y01 A 1 605 606 Y01 Y01 . 
H 2 Y01 A 1 606 607 Y01 Y01 . 
I 4 PGT A 1 607 609 PGT PGT . 
J 2 Y01 A 1 608 602 Y01 Y01 . 
K 2 Y01 C 1 601 602 Y01 Y01 . 
L 2 Y01 C 1 602 601 Y01 Y01 . 
M 2 Y01 C 1 603 603 Y01 Y01 . 
N 3 NAG C 1 604 604 NAG NAG . 
O 2 Y01 C 1 605 605 Y01 Y01 . 
P 2 Y01 C 1 606 606 Y01 Y01 . 
Q 2 Y01 C 1 607 607 Y01 Y01 . 
R 4 PGT C 1 608 609 PGT PGT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . O 2 132.167 108.982 129.238 1 120.89 ? CAA Y01 605 C 1 
HETATM 2 C CBA Y01 . . . O 2 132.852 108.988 130.602 1 119.79 ? CBA Y01 605 C 1 
HETATM 3 C CAB Y01 . . . O 2 133.95 107.93 130.653 1 115.4 ? CAB Y01 605 C 1 
HETATM 4 C CAN Y01 . . . O 2 131.859 108.769 131.745 1 114.28 ? CAN Y01 605 C 1 
HETATM 5 C CAJ Y01 . . . O 2 131.406 110.031 132.47 1 111.34 ? CAJ Y01 605 C 1 
HETATM 6 C CAO Y01 . . . O 2 132.379 110.455 133.568 1 109.44 ? CAO Y01 605 C 1 
HETATM 7 C CBB Y01 . . . O 2 133.028 109.318 134.375 1 112.81 ? CBB Y01 605 C 1 
HETATM 8 C CAC Y01 . . . O 2 134.546 109.455 134.269 1 115.92 ? CAC Y01 605 C 1 
HETATM 9 C CBE Y01 . . . O 2 132.438 109.305 135.802 1 122.33 ? CBE Y01 605 C 1 
HETATM 10 C CAP Y01 . . . O 2 130.973 108.779 135.778 1 127.42 ? CAP Y01 605 C 1 
HETATM 11 C CAQ Y01 . . . O 2 130.722 108.046 137.107 1 130.12 ? CAQ Y01 605 C 1 
HETATM 12 C CBG Y01 . . . O 2 131.888 108.521 137.959 1 128.54 ? CBG Y01 605 C 1 
HETATM 13 C CBI Y01 . . . O 2 133.082 108.519 136.988 1 127.07 ? CBI Y01 605 C 1 
HETATM 14 C CAE Y01 . . . O 2 133.447 107.084 136.587 1 130.87 ? CAE Y01 605 C 1 
HETATM 15 C CAU Y01 . . . O 2 134.24 109.208 137.722 1 118.22 ? CAU Y01 605 C 1 
HETATM 16 C CAS Y01 . . . O 2 134.5 108.65 139.125 1 121.63 ? CAS Y01 605 C 1 
HETATM 17 C CBF Y01 . . . O 2 133.248 108.626 140.007 1 124.76 ? CBF Y01 605 C 1 
HETATM 18 C CBD Y01 . . . O 2 132.127 107.852 139.302 1 129 ? CBD Y01 605 C 1 
HETATM 19 C CAK Y01 . . . O 2 130.838 107.849 140.121 1 129.81 ? CAK Y01 605 C 1 
HETATM 20 C CAI Y01 . . . O 2 131.036 107.871 141.6 1 135.69 ? CAI Y01 605 C 1 
HETATM 21 C CAZ Y01 . . . O 2 132.195 108.091 142.216 1 137.19 ? CAZ Y01 605 C 1 
HETATM 22 C CAV Y01 . . . O 2 132.237 108.151 143.721 1 139.21 ? CAV Y01 605 C 1 
HETATM 23 C CBH Y01 . . . O 2 133.513 108.166 141.464 1 131.37 ? CBH Y01 605 C 1 
HETATM 24 C CAD Y01 . . . O 2 134.187 106.786 141.519 1 127.58 ? CAD Y01 605 C 1 
HETATM 25 C CAT Y01 . . . O 2 134.431 109.22 142.126 1 132.47 ? CAT Y01 605 C 1 
HETATM 26 C CAR Y01 . . . O 2 134.468 109.205 143.65 1 135.14 ? CAR Y01 605 C 1 
HETATM 27 C CBC Y01 . . . O 2 133.06 109.342 144.185 1 138.96 ? CBC Y01 605 C 1 
HETATM 28 O OAW Y01 . . . O 2 133.136 109.397 145.619 1 148.05 ? OAW Y01 605 C 1 
HETATM 29 C CAY Y01 . . . O 2 132.694 110.482 146.254 1 154.7 ? CAY Y01 605 C 1 
HETATM 30 O OAG Y01 . . . O 2 132.021 111.333 145.726 1 153.62 ? OAG Y01 605 C 1 
HETATM 31 C CAM Y01 . . . O 2 133.155 110.494 147.686 1 158.68 ? CAM Y01 605 C 1 
HETATM 32 C CAL Y01 . . . O 2 134.655 110.654 147.835 1 158.58 ? CAL Y01 605 C 1 
HETATM 33 C CAX Y01 . . . O 2 135.252 109.983 149.085 1 163.16 ? CAX Y01 605 C 1 
HETATM 34 O OAH Y01 . . . O 2 134.64 110.188 150.153 1 162.62 ? OAH Y01 605 C 1 
HETATM 35 O OAF Y01 . . . O 2 136.286 109.3 148.942 1 163.1 ? OAF Y01 605 C 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           35 
#