data_8QT2 # _model_server_result.job_id ogLIK5dN9HKVSAR3hmNCig _model_server_result.datetime_utc '2025-01-09 06:42:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qt2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 8QT2 # _exptl.entry_id 8QT2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.24 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.41 _cell.angle_gamma 90 _cell.entry_id 8QT2 _cell.length_a 36.041 _cell.length_b 73.37 _cell.length_c 55.119 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QT2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C LYS 6 B LYS 6 1_555 B N NIY 7 B NIY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 B NZ LYS 6 B LYS 6 1_555 G C11 WU8 . B WU8 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C NIY 7 B NIY 7 1_555 B N GLY 8 B GLY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C GLY 9 B GLY 9 1_555 B N NH2 10 B NH2 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? metalc ? metalc1 A SG CYS 143 A CYS 195 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc2 A SG CYS 148 A CYS 200 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc3 A SG CYS 169 A CYS 221 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc4 A SG CYS 172 A CYS 224 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? # _chem_comp.formula 'C8 H19 N O5' _chem_comp.formula_weight 209.24 _chem_comp.id BTB _chem_comp.mon_nstd_flag . _chem_comp.name 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIS-TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BTB sing 70 n n C1 C2 BTB sing 71 n n C1 H11 BTB sing 72 n n C1 H12 BTB sing 73 n n O1 HO1 BTB sing 74 n n C2 C3 BTB sing 75 n n C2 C4 BTB sing 76 n n C2 N BTB sing 77 n n C3 O3 BTB sing 78 n n C3 H31 BTB sing 79 n n C3 H32 BTB sing 80 n n O3 HO3 BTB sing 81 n n C4 O4 BTB sing 82 n n C4 H41 BTB sing 83 n n C4 H42 BTB sing 84 n n O4 HO4 BTB sing 85 n n N C5 BTB sing 86 n n N C7 BTB sing 87 n n C5 C6 BTB sing 88 n n C5 H51 BTB sing 89 n n C5 H52 BTB sing 90 n n C6 O6 BTB sing 91 n n C6 H61 BTB sing 92 n n C6 H62 BTB sing 93 n n O6 HO6 BTB sing 94 n n C7 C8 BTB sing 95 n n C7 H71 BTB sing 96 n n C7 H72 BTB sing 97 n n C8 O8 BTB sing 98 n n C8 H81 BTB sing 99 n n C8 H82 BTB sing 100 n n O8 HO8 BTB sing 101 n n # _atom_sites.entry_id 8QT2 _atom_sites.fract_transf_matrix[1][1] 0.027746 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002628 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01363 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018224 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 2 ZN ZN . D 4 EDO A 1 402 401 EDO EDO . E 5 BTB A 1 403 402 BTB BTB . F 6 BU3 A 1 404 403 BU3 BU3 . G 7 WU8 B 1 101 1 WU8 TA6 . H 8 HOH A 1 501 220 HOH HOH . H 8 HOH A 2 502 214 HOH HOH . H 8 HOH A 3 503 103 HOH HOH . H 8 HOH A 4 504 159 HOH HOH . H 8 HOH A 5 505 225 HOH HOH . H 8 HOH A 6 506 121 HOH HOH . H 8 HOH A 7 507 104 HOH HOH . H 8 HOH A 8 508 132 HOH HOH . H 8 HOH A 9 509 35 HOH HOH . H 8 HOH A 10 510 42 HOH HOH . H 8 HOH A 11 511 81 HOH HOH . H 8 HOH A 12 512 8 HOH HOH . H 8 HOH A 13 513 41 HOH HOH . H 8 HOH A 14 514 199 HOH HOH . H 8 HOH A 15 515 107 HOH HOH . H 8 HOH A 16 516 210 HOH HOH . H 8 HOH A 17 517 168 HOH HOH . H 8 HOH A 18 518 114 HOH HOH . H 8 HOH A 19 519 91 HOH HOH . H 8 HOH A 20 520 102 HOH HOH . H 8 HOH A 21 521 77 HOH HOH . H 8 HOH A 22 522 73 HOH HOH . H 8 HOH A 23 523 32 HOH HOH . H 8 HOH A 24 524 235 HOH HOH . H 8 HOH A 25 525 242 HOH HOH . H 8 HOH A 26 526 51 HOH HOH . H 8 HOH A 27 527 25 HOH HOH . H 8 HOH A 28 528 16 HOH HOH . H 8 HOH A 29 529 145 HOH HOH . H 8 HOH A 30 530 60 HOH HOH . H 8 HOH A 31 531 217 HOH HOH . H 8 HOH A 32 532 28 HOH HOH . H 8 HOH A 33 533 44 HOH HOH . H 8 HOH A 34 534 75 HOH HOH . H 8 HOH A 35 535 26 HOH HOH . H 8 HOH A 36 536 27 HOH HOH . H 8 HOH A 37 537 79 HOH HOH . H 8 HOH A 38 538 24 HOH HOH . H 8 HOH A 39 539 85 HOH HOH . H 8 HOH A 40 540 76 HOH HOH . H 8 HOH A 41 541 66 HOH HOH . H 8 HOH A 42 542 152 HOH HOH . H 8 HOH A 43 543 39 HOH HOH . H 8 HOH A 44 544 97 HOH HOH . H 8 HOH A 45 545 239 HOH HOH . H 8 HOH A 46 546 29 HOH HOH . H 8 HOH A 47 547 4 HOH HOH . H 8 HOH A 48 548 98 HOH HOH . H 8 HOH A 49 549 128 HOH HOH . H 8 HOH A 50 550 182 HOH HOH . H 8 HOH A 51 551 179 HOH HOH . H 8 HOH A 52 552 22 HOH HOH . H 8 HOH A 53 553 201 HOH HOH . H 8 HOH A 54 554 96 HOH HOH . H 8 HOH A 55 555 83 HOH HOH . H 8 HOH A 56 556 193 HOH HOH . H 8 HOH A 57 557 135 HOH HOH . H 8 HOH A 58 558 38 HOH HOH . H 8 HOH A 59 559 6 HOH HOH . H 8 HOH A 60 560 219 HOH HOH . H 8 HOH A 61 561 37 HOH HOH . H 8 HOH A 62 562 88 HOH HOH . H 8 HOH A 63 563 175 HOH HOH . H 8 HOH A 64 564 129 HOH HOH . H 8 HOH A 65 565 49 HOH HOH . H 8 HOH A 66 566 3 HOH HOH . H 8 HOH A 67 567 15 HOH HOH . H 8 HOH A 68 568 2 HOH HOH . H 8 HOH A 69 569 1 HOH HOH . H 8 HOH A 70 570 142 HOH HOH . H 8 HOH A 71 571 87 HOH HOH . H 8 HOH A 72 572 50 HOH HOH . H 8 HOH A 73 573 43 HOH HOH . H 8 HOH A 74 574 218 HOH HOH . H 8 HOH A 75 575 58 HOH HOH . H 8 HOH A 76 576 34 HOH HOH . H 8 HOH A 77 577 149 HOH HOH . H 8 HOH A 78 578 84 HOH HOH . H 8 HOH A 79 579 78 HOH HOH . H 8 HOH A 80 580 5 HOH HOH . H 8 HOH A 81 581 130 HOH HOH . H 8 HOH A 82 582 138 HOH HOH . H 8 HOH A 83 583 224 HOH HOH . H 8 HOH A 84 584 18 HOH HOH . H 8 HOH A 85 585 206 HOH HOH . H 8 HOH A 86 586 173 HOH HOH . H 8 HOH A 87 587 153 HOH HOH . H 8 HOH A 88 588 147 HOH HOH . H 8 HOH A 89 589 105 HOH HOH . H 8 HOH A 90 590 47 HOH HOH . H 8 HOH A 91 591 11 HOH HOH . H 8 HOH A 92 592 33 HOH HOH . H 8 HOH A 93 593 13 HOH HOH . H 8 HOH A 94 594 231 HOH HOH . H 8 HOH A 95 595 48 HOH HOH . H 8 HOH A 96 596 174 HOH HOH . H 8 HOH A 97 597 226 HOH HOH . H 8 HOH A 98 598 180 HOH HOH . H 8 HOH A 99 599 74 HOH HOH . H 8 HOH A 100 600 20 HOH HOH . H 8 HOH A 101 601 45 HOH HOH . H 8 HOH A 102 602 151 HOH HOH . H 8 HOH A 103 603 9 HOH HOH . H 8 HOH A 104 604 118 HOH HOH . H 8 HOH A 105 605 65 HOH HOH . H 8 HOH A 106 606 54 HOH HOH . H 8 HOH A 107 607 71 HOH HOH . H 8 HOH A 108 608 202 HOH HOH . H 8 HOH A 109 609 213 HOH HOH . H 8 HOH A 110 610 205 HOH HOH . H 8 HOH A 111 611 222 HOH HOH . H 8 HOH A 112 612 203 HOH HOH . H 8 HOH A 113 613 237 HOH HOH . H 8 HOH A 114 614 100 HOH HOH . H 8 HOH A 115 615 154 HOH HOH . H 8 HOH A 116 616 93 HOH HOH . H 8 HOH A 117 617 69 HOH HOH . H 8 HOH A 118 618 31 HOH HOH . H 8 HOH A 119 619 146 HOH HOH . H 8 HOH A 120 620 14 HOH HOH . H 8 HOH A 121 621 208 HOH HOH . H 8 HOH A 122 622 23 HOH HOH . H 8 HOH A 123 623 191 HOH HOH . H 8 HOH A 124 624 55 HOH HOH . H 8 HOH A 125 625 95 HOH HOH . H 8 HOH A 126 626 215 HOH HOH . H 8 HOH A 127 627 140 HOH HOH . H 8 HOH A 128 628 144 HOH HOH . H 8 HOH A 129 629 52 HOH HOH . H 8 HOH A 130 630 101 HOH HOH . H 8 HOH A 131 631 171 HOH HOH . H 8 HOH A 132 632 80 HOH HOH . H 8 HOH A 133 633 64 HOH HOH . H 8 HOH A 134 634 192 HOH HOH . H 8 HOH A 135 635 12 HOH HOH . H 8 HOH A 136 636 112 HOH HOH . H 8 HOH A 137 637 185 HOH HOH . H 8 HOH A 138 638 53 HOH HOH . H 8 HOH A 139 639 57 HOH HOH . H 8 HOH A 140 640 72 HOH HOH . H 8 HOH A 141 641 123 HOH HOH . H 8 HOH A 142 642 56 HOH HOH . H 8 HOH A 143 643 63 HOH HOH . H 8 HOH A 144 644 59 HOH HOH . H 8 HOH A 145 645 162 HOH HOH . H 8 HOH A 146 646 158 HOH HOH . H 8 HOH A 147 647 40 HOH HOH . H 8 HOH A 148 648 181 HOH HOH . H 8 HOH A 149 649 131 HOH HOH . H 8 HOH A 150 650 68 HOH HOH . H 8 HOH A 151 651 67 HOH HOH . H 8 HOH A 152 652 89 HOH HOH . H 8 HOH A 153 653 207 HOH HOH . H 8 HOH A 154 654 139 HOH HOH . H 8 HOH A 155 655 127 HOH HOH . H 8 HOH A 156 656 229 HOH HOH . H 8 HOH A 157 657 198 HOH HOH . H 8 HOH A 158 658 194 HOH HOH . H 8 HOH A 159 659 157 HOH HOH . H 8 HOH A 160 660 109 HOH HOH . H 8 HOH A 161 661 17 HOH HOH . H 8 HOH A 162 662 21 HOH HOH . H 8 HOH A 163 663 221 HOH HOH . H 8 HOH A 164 664 111 HOH HOH . H 8 HOH A 165 665 94 HOH HOH . H 8 HOH A 166 666 7 HOH HOH . H 8 HOH A 167 667 141 HOH HOH . H 8 HOH A 168 668 160 HOH HOH . H 8 HOH A 169 669 232 HOH HOH . H 8 HOH A 170 670 124 HOH HOH . H 8 HOH A 171 671 211 HOH HOH . H 8 HOH A 172 672 166 HOH HOH . H 8 HOH A 173 673 148 HOH HOH . H 8 HOH A 174 674 227 HOH HOH . H 8 HOH A 175 675 170 HOH HOH . H 8 HOH A 176 676 61 HOH HOH . H 8 HOH A 177 677 125 HOH HOH . H 8 HOH A 178 678 190 HOH HOH . H 8 HOH A 179 679 137 HOH HOH . H 8 HOH A 180 680 234 HOH HOH . H 8 HOH A 181 681 115 HOH HOH . H 8 HOH A 182 682 176 HOH HOH . H 8 HOH A 183 683 110 HOH HOH . H 8 HOH A 184 684 195 HOH HOH . H 8 HOH A 185 685 165 HOH HOH . H 8 HOH A 186 686 36 HOH HOH . H 8 HOH A 187 687 200 HOH HOH . H 8 HOH A 188 688 241 HOH HOH . H 8 HOH A 189 689 92 HOH HOH . H 8 HOH A 190 690 90 HOH HOH . H 8 HOH A 191 691 188 HOH HOH . H 8 HOH A 192 692 223 HOH HOH . H 8 HOH A 193 693 99 HOH HOH . H 8 HOH A 194 694 82 HOH HOH . H 8 HOH A 195 695 184 HOH HOH . H 8 HOH A 196 696 236 HOH HOH . H 8 HOH A 197 697 161 HOH HOH . H 8 HOH A 198 698 62 HOH HOH . H 8 HOH A 199 699 108 HOH HOH . H 8 HOH A 200 700 163 HOH HOH . H 8 HOH A 201 701 86 HOH HOH . H 8 HOH A 202 702 46 HOH HOH . H 8 HOH A 203 703 120 HOH HOH . H 8 HOH A 204 704 196 HOH HOH . H 8 HOH A 205 705 240 HOH HOH . H 8 HOH A 206 706 189 HOH HOH . H 8 HOH A 207 707 113 HOH HOH . H 8 HOH A 208 708 212 HOH HOH . H 8 HOH A 209 709 233 HOH HOH . H 8 HOH A 210 710 216 HOH HOH . H 8 HOH A 211 711 134 HOH HOH . H 8 HOH A 212 712 197 HOH HOH . H 8 HOH A 213 713 122 HOH HOH . H 8 HOH A 214 714 183 HOH HOH . H 8 HOH A 215 715 187 HOH HOH . H 8 HOH A 216 716 106 HOH HOH . H 8 HOH A 217 717 167 HOH HOH . H 8 HOH A 218 718 238 HOH HOH . H 8 HOH A 219 719 186 HOH HOH . H 8 HOH A 220 720 172 HOH HOH . H 8 HOH A 221 721 230 HOH HOH . H 8 HOH A 222 722 117 HOH HOH . H 8 HOH A 223 723 156 HOH HOH . H 8 HOH A 224 724 177 HOH HOH . H 8 HOH A 225 725 143 HOH HOH . I 8 HOH B 1 201 204 HOH HOH . I 8 HOH B 2 202 209 HOH HOH . I 8 HOH B 3 203 228 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BTB . . . E 5 0.47 24.358 -11.713 1 44.62 ? C1 BTB 403 A 1 HETATM 2 O O1 BTB . . . E 5 0.095 23.384 -10.766 1 42.81 ? O1 BTB 403 A 1 HETATM 3 C C2 BTB . . . E 5 1.95 24.763 -11.54 1 44.9 ? C2 BTB 403 A 1 HETATM 4 C C3 BTB . . . E 5 2.147 26.023 -12.419 1 46.48 ? C3 BTB 403 A 1 HETATM 5 O O3 BTB . . . E 5 3.492 26.393 -12.559 1 46.48 ? O3 BTB 403 A 1 HETATM 6 C C4 BTB . . . E 5 2.241 25.208 -10.089 1 42.95 ? C4 BTB 403 A 1 HETATM 7 O O4 BTB . . . E 5 1.816 26.53 -9.815 1 40.51 ? O4 BTB 403 A 1 HETATM 8 N N BTB . . . E 5 2.893 23.73 -11.994 1 44.44 ? N BTB 403 A 1 HETATM 9 C C5 BTB . . . E 5 3.1 22.627 -11.064 1 39.68 ? C5 BTB 403 A 1 HETATM 10 C C6 BTB . . . E 5 4.547 22.311 -10.718 1 39.41 ? C6 BTB 403 A 1 HETATM 11 O O6 BTB . . . E 5 5.269 23.499 -10.421 1 36.54 ? O6 BTB 403 A 1 HETATM 12 C C7 BTB . . . E 5 2.767 23.313 -13.383 1 42.28 ? C7 BTB 403 A 1 HETATM 13 C C8 BTB . . . E 5 4.026 23.421 -14.224 1 45.95 ? C8 BTB 403 A 1 HETATM 14 O O8 BTB . . . E 5 5.108 23.928 -13.464 1 42.45 ? O8 BTB 403 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 364 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 14 #