data_8QT3 # _model_server_result.job_id fhtAG-n2Ygx2JiOxroScsQ _model_server_result.datetime_utc '2024-11-30 18:41:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qt3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8QT3 # _exptl.entry_id 8QT3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.3 _cell.angle_gamma 90 _cell.entry_id 8QT3 _cell.length_a 38.357 _cell.length_b 74.466 _cell.length_c 56.211 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QT3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C LYS 6 B LYS 6 1_555 B N NIY 7 B NIY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 B NZ LYS 6 B LYS 6 1_555 H C11 WU3 . B WU3 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C NIY 7 B NIY 7 1_555 B N GLY 8 B GLY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A SG CYS 143 A CYS 195 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc2 A SG CYS 148 A CYS 200 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc3 A SG CYS 169 A CYS 221 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc4 A SG CYS 172 A CYS 224 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8QT3 _atom_sites.fract_transf_matrix[1][1] 0.026071 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00334 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013429 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017935 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 3 ZN ZN . D 4 EDO A 1 402 403 EDO EDO . E 4 EDO A 1 403 404 EDO EDO . F 4 EDO A 1 404 405 EDO EDO . G 5 NAD A 1 405 401 NAD NAD . H 6 WU3 B 1 101 1 WU3 TNS . I 7 HOH A 1 501 188 HOH HOH . I 7 HOH A 2 502 253 HOH HOH . I 7 HOH A 3 503 268 HOH HOH . I 7 HOH A 4 504 195 HOH HOH . I 7 HOH A 5 505 152 HOH HOH . I 7 HOH A 6 506 249 HOH HOH . I 7 HOH A 7 507 250 HOH HOH . I 7 HOH A 8 508 200 HOH HOH . I 7 HOH A 9 509 32 HOH HOH . I 7 HOH A 10 510 226 HOH HOH . I 7 HOH A 11 511 110 HOH HOH . I 7 HOH A 12 512 210 HOH HOH . I 7 HOH A 13 513 55 HOH HOH . I 7 HOH A 14 514 56 HOH HOH . I 7 HOH A 15 515 59 HOH HOH . I 7 HOH A 16 516 77 HOH HOH . I 7 HOH A 17 517 73 HOH HOH . I 7 HOH A 18 518 54 HOH HOH . I 7 HOH A 19 519 127 HOH HOH . I 7 HOH A 20 520 284 HOH HOH . I 7 HOH A 21 521 97 HOH HOH . I 7 HOH A 22 522 212 HOH HOH . I 7 HOH A 23 523 285 HOH HOH . I 7 HOH A 24 524 174 HOH HOH . I 7 HOH A 25 525 51 HOH HOH . I 7 HOH A 26 526 170 HOH HOH . I 7 HOH A 27 527 177 HOH HOH . I 7 HOH A 28 528 150 HOH HOH . I 7 HOH A 29 529 251 HOH HOH . I 7 HOH A 30 530 16 HOH HOH . I 7 HOH A 31 531 82 HOH HOH . I 7 HOH A 32 532 239 HOH HOH . I 7 HOH A 33 533 131 HOH HOH . I 7 HOH A 34 534 1 HOH HOH . I 7 HOH A 35 535 196 HOH HOH . I 7 HOH A 36 536 35 HOH HOH . I 7 HOH A 37 537 166 HOH HOH . I 7 HOH A 38 538 87 HOH HOH . I 7 HOH A 39 539 140 HOH HOH . I 7 HOH A 40 540 101 HOH HOH . I 7 HOH A 41 541 88 HOH HOH . I 7 HOH A 42 542 84 HOH HOH . I 7 HOH A 43 543 145 HOH HOH . I 7 HOH A 44 544 58 HOH HOH . I 7 HOH A 45 545 7 HOH HOH . I 7 HOH A 46 546 148 HOH HOH . I 7 HOH A 47 547 189 HOH HOH . I 7 HOH A 48 548 266 HOH HOH . I 7 HOH A 49 549 41 HOH HOH . I 7 HOH A 50 550 130 HOH HOH . I 7 HOH A 51 551 12 HOH HOH . I 7 HOH A 52 552 191 HOH HOH . I 7 HOH A 53 553 80 HOH HOH . I 7 HOH A 54 554 207 HOH HOH . I 7 HOH A 55 555 10 HOH HOH . I 7 HOH A 56 556 125 HOH HOH . I 7 HOH A 57 557 103 HOH HOH . I 7 HOH A 58 558 116 HOH HOH . I 7 HOH A 59 559 42 HOH HOH . I 7 HOH A 60 560 214 HOH HOH . I 7 HOH A 61 561 113 HOH HOH . I 7 HOH A 62 562 27 HOH HOH . I 7 HOH A 63 563 4 HOH HOH . I 7 HOH A 64 564 33 HOH HOH . I 7 HOH A 65 565 37 HOH HOH . I 7 HOH A 66 566 247 HOH HOH . I 7 HOH A 67 567 158 HOH HOH . I 7 HOH A 68 568 120 HOH HOH . I 7 HOH A 69 569 30 HOH HOH . I 7 HOH A 70 570 107 HOH HOH . I 7 HOH A 71 571 122 HOH HOH . I 7 HOH A 72 572 109 HOH HOH . I 7 HOH A 73 573 192 HOH HOH . I 7 HOH A 74 574 252 HOH HOH . I 7 HOH A 75 575 3 HOH HOH . I 7 HOH A 76 576 95 HOH HOH . I 7 HOH A 77 577 114 HOH HOH . I 7 HOH A 78 578 137 HOH HOH . I 7 HOH A 79 579 197 HOH HOH . I 7 HOH A 80 580 57 HOH HOH . I 7 HOH A 81 581 141 HOH HOH . I 7 HOH A 82 582 236 HOH HOH . I 7 HOH A 83 583 81 HOH HOH . I 7 HOH A 84 584 53 HOH HOH . I 7 HOH A 85 585 22 HOH HOH . I 7 HOH A 86 586 60 HOH HOH . I 7 HOH A 87 587 18 HOH HOH . I 7 HOH A 88 588 31 HOH HOH . I 7 HOH A 89 589 164 HOH HOH . I 7 HOH A 90 590 25 HOH HOH . I 7 HOH A 91 591 90 HOH HOH . I 7 HOH A 92 592 13 HOH HOH . I 7 HOH A 93 593 194 HOH HOH . I 7 HOH A 94 594 46 HOH HOH . I 7 HOH A 95 595 26 HOH HOH . I 7 HOH A 96 596 204 HOH HOH . I 7 HOH A 97 597 201 HOH HOH . I 7 HOH A 98 598 8 HOH HOH . I 7 HOH A 99 599 52 HOH HOH . I 7 HOH A 100 600 267 HOH HOH . I 7 HOH A 101 601 66 HOH HOH . I 7 HOH A 102 602 44 HOH HOH . I 7 HOH A 103 603 94 HOH HOH . I 7 HOH A 104 604 227 HOH HOH . I 7 HOH A 105 605 255 HOH HOH . I 7 HOH A 106 606 115 HOH HOH . I 7 HOH A 107 607 238 HOH HOH . I 7 HOH A 108 608 76 HOH HOH . I 7 HOH A 109 609 21 HOH HOH . I 7 HOH A 110 610 184 HOH HOH . I 7 HOH A 111 611 157 HOH HOH . I 7 HOH A 112 612 283 HOH HOH . I 7 HOH A 113 613 79 HOH HOH . I 7 HOH A 114 614 39 HOH HOH . I 7 HOH A 115 615 45 HOH HOH . I 7 HOH A 116 616 15 HOH HOH . I 7 HOH A 117 617 24 HOH HOH . I 7 HOH A 118 618 19 HOH HOH . I 7 HOH A 119 619 213 HOH HOH . I 7 HOH A 120 620 23 HOH HOH . I 7 HOH A 121 621 231 HOH HOH . I 7 HOH A 122 622 74 HOH HOH . I 7 HOH A 123 623 198 HOH HOH . I 7 HOH A 124 624 71 HOH HOH . I 7 HOH A 125 625 5 HOH HOH . I 7 HOH A 126 626 123 HOH HOH . I 7 HOH A 127 627 85 HOH HOH . I 7 HOH A 128 628 17 HOH HOH . I 7 HOH A 129 629 20 HOH HOH . I 7 HOH A 130 630 161 HOH HOH . I 7 HOH A 131 631 257 HOH HOH . I 7 HOH A 132 632 205 HOH HOH . I 7 HOH A 133 633 154 HOH HOH . I 7 HOH A 134 634 29 HOH HOH . I 7 HOH A 135 635 203 HOH HOH . I 7 HOH A 136 636 11 HOH HOH . I 7 HOH A 137 637 78 HOH HOH . I 7 HOH A 138 638 72 HOH HOH . I 7 HOH A 139 639 136 HOH HOH . I 7 HOH A 140 640 117 HOH HOH . I 7 HOH A 141 641 67 HOH HOH . I 7 HOH A 142 642 102 HOH HOH . I 7 HOH A 143 643 270 HOH HOH . I 7 HOH A 144 644 14 HOH HOH . I 7 HOH A 145 645 40 HOH HOH . I 7 HOH A 146 646 65 HOH HOH . I 7 HOH A 147 647 62 HOH HOH . I 7 HOH A 148 648 264 HOH HOH . I 7 HOH A 149 649 274 HOH HOH . I 7 HOH A 150 650 202 HOH HOH . I 7 HOH A 151 651 199 HOH HOH . I 7 HOH A 152 652 248 HOH HOH . I 7 HOH A 153 653 169 HOH HOH . I 7 HOH A 154 654 185 HOH HOH . I 7 HOH A 155 655 156 HOH HOH . I 7 HOH A 156 656 259 HOH HOH . I 7 HOH A 157 657 135 HOH HOH . I 7 HOH A 158 658 261 HOH HOH . I 7 HOH A 159 659 63 HOH HOH . I 7 HOH A 160 660 258 HOH HOH . I 7 HOH A 161 661 118 HOH HOH . I 7 HOH A 162 662 168 HOH HOH . I 7 HOH A 163 663 187 HOH HOH . I 7 HOH A 164 664 89 HOH HOH . I 7 HOH A 165 665 61 HOH HOH . I 7 HOH A 166 666 83 HOH HOH . I 7 HOH A 167 667 237 HOH HOH . I 7 HOH A 168 668 34 HOH HOH . I 7 HOH A 169 669 75 HOH HOH . I 7 HOH A 170 670 159 HOH HOH . I 7 HOH A 171 671 143 HOH HOH . I 7 HOH A 172 672 273 HOH HOH . I 7 HOH A 173 673 242 HOH HOH . I 7 HOH A 174 674 49 HOH HOH . I 7 HOH A 175 675 112 HOH HOH . I 7 HOH A 176 676 38 HOH HOH . I 7 HOH A 177 677 132 HOH HOH . I 7 HOH A 178 678 91 HOH HOH . I 7 HOH A 179 679 50 HOH HOH . I 7 HOH A 180 680 100 HOH HOH . I 7 HOH A 181 681 151 HOH HOH . I 7 HOH A 182 682 162 HOH HOH . I 7 HOH A 183 683 146 HOH HOH . I 7 HOH A 184 684 43 HOH HOH . I 7 HOH A 185 685 240 HOH HOH . I 7 HOH A 186 686 134 HOH HOH . I 7 HOH A 187 687 241 HOH HOH . I 7 HOH A 188 688 206 HOH HOH . I 7 HOH A 189 689 218 HOH HOH . I 7 HOH A 190 690 176 HOH HOH . I 7 HOH A 191 691 221 HOH HOH . I 7 HOH A 192 692 149 HOH HOH . I 7 HOH A 193 693 86 HOH HOH . I 7 HOH A 194 694 254 HOH HOH . I 7 HOH A 195 695 245 HOH HOH . I 7 HOH A 196 696 92 HOH HOH . I 7 HOH A 197 697 36 HOH HOH . I 7 HOH A 198 698 139 HOH HOH . I 7 HOH A 199 699 183 HOH HOH . I 7 HOH A 200 700 225 HOH HOH . I 7 HOH A 201 701 220 HOH HOH . I 7 HOH A 202 702 279 HOH HOH . I 7 HOH A 203 703 105 HOH HOH . I 7 HOH A 204 704 155 HOH HOH . I 7 HOH A 205 705 163 HOH HOH . I 7 HOH A 206 706 128 HOH HOH . I 7 HOH A 207 707 70 HOH HOH . I 7 HOH A 208 708 278 HOH HOH . I 7 HOH A 209 709 121 HOH HOH . I 7 HOH A 210 710 219 HOH HOH . I 7 HOH A 211 711 133 HOH HOH . I 7 HOH A 212 712 208 HOH HOH . I 7 HOH A 213 713 96 HOH HOH . I 7 HOH A 214 714 193 HOH HOH . I 7 HOH A 215 715 182 HOH HOH . I 7 HOH A 216 716 244 HOH HOH . I 7 HOH A 217 717 232 HOH HOH . I 7 HOH A 218 718 179 HOH HOH . I 7 HOH A 219 719 173 HOH HOH . I 7 HOH A 220 720 108 HOH HOH . I 7 HOH A 221 721 217 HOH HOH . I 7 HOH A 222 722 277 HOH HOH . I 7 HOH A 223 723 224 HOH HOH . I 7 HOH A 224 724 281 HOH HOH . I 7 HOH A 225 725 147 HOH HOH . I 7 HOH A 226 726 223 HOH HOH . I 7 HOH A 227 727 178 HOH HOH . I 7 HOH A 228 728 111 HOH HOH . I 7 HOH A 229 729 276 HOH HOH . I 7 HOH A 230 730 153 HOH HOH . I 7 HOH A 231 731 175 HOH HOH . I 7 HOH A 232 732 233 HOH HOH . I 7 HOH A 233 733 180 HOH HOH . I 7 HOH A 234 734 181 HOH HOH . I 7 HOH A 235 735 282 HOH HOH . I 7 HOH A 236 736 172 HOH HOH . I 7 HOH A 237 737 106 HOH HOH . I 7 HOH A 238 738 216 HOH HOH . I 7 HOH A 239 739 211 HOH HOH . I 7 HOH A 240 740 228 HOH HOH . I 7 HOH A 241 741 222 HOH HOH . I 7 HOH A 242 742 48 HOH HOH . I 7 HOH A 243 743 171 HOH HOH . I 7 HOH A 244 744 246 HOH HOH . I 7 HOH A 245 745 271 HOH HOH . I 7 HOH A 246 746 142 HOH HOH . I 7 HOH A 247 747 256 HOH HOH . J 7 HOH B 1 201 235 HOH HOH . J 7 HOH B 2 202 265 HOH HOH . J 7 HOH B 3 203 104 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 0.848 _atom_site.Cartn_y 24.216 _atom_site.Cartn_z 33.722 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #