data_8QT7
#
_model_server_result.job_id            49x1z6BI9Nkv0xDRIhR1Yg 
_model_server_result.datetime_utc      '2024-10-10 10:26:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qt7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    8QT7 
#
_exptl.entry_id    8QT7 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8QT7 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QT7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 68 A HIS 69 1_555 E FE HEM . A HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? 
metalc ? metalc2 A NE2 HIS 82 A HIS 83 1_555 D FE HEM . A HEM 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
metalc ? metalc3 A NE2 HIS 128 A HIS 129 1_555 E FE HEM . A HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc4 A NE2 HIS 141 A HIS 142 1_555 D FE HEM . A HEM 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 410 n n 
PA O2A NDP sing 411 n n 
PA O5B NDP sing 412 n n 
PA O3 NDP sing 413 n n 
O2A HOA2 NDP sing 414 n n 
O5B C5B NDP sing 415 n n 
C5B C4B NDP sing 416 n n 
C5B H51A NDP sing 417 n n 
C5B H52A NDP sing 418 n n 
C4B O4B NDP sing 419 n n 
C4B C3B NDP sing 420 n n 
C4B H4B NDP sing 421 n n 
O4B C1B NDP sing 422 n n 
C3B O3B NDP sing 423 n n 
C3B C2B NDP sing 424 n n 
C3B H3B NDP sing 425 n n 
O3B HO3A NDP sing 426 n n 
C2B O2B NDP sing 427 n n 
C2B C1B NDP sing 428 n n 
C2B H2B NDP sing 429 n n 
O2B P2B NDP sing 430 n n 
C1B N9A NDP sing 431 n n 
C1B H1B NDP sing 432 n n 
N9A C8A NDP sing 433 n y 
N9A C4A NDP sing 434 n y 
C8A N7A NDP doub 435 n y 
C8A H8A NDP sing 436 n n 
N7A C5A NDP sing 437 n y 
C5A C6A NDP sing 438 n y 
C5A C4A NDP doub 439 n y 
C6A N6A NDP sing 440 n n 
C6A N1A NDP doub 441 n y 
N6A H61A NDP sing 442 n n 
N6A H62A NDP sing 443 n n 
N1A C2A NDP sing 444 n y 
C2A N3A NDP doub 445 n y 
C2A H2A NDP sing 446 n n 
N3A C4A NDP sing 447 n y 
O3 PN NDP sing 448 n n 
PN O1N NDP doub 449 n n 
PN O2N NDP sing 450 n n 
PN O5D NDP sing 451 n n 
O2N H21N NDP sing 452 n n 
O5D C5D NDP sing 453 n n 
C5D C4D NDP sing 454 n n 
C5D H51N NDP sing 455 n n 
C5D H52N NDP sing 456 n n 
C4D O4D NDP sing 457 n n 
C4D C3D NDP sing 458 n n 
C4D H4D NDP sing 459 n n 
O4D C1D NDP sing 460 n n 
C3D O3D NDP sing 461 n n 
C3D C2D NDP sing 462 n n 
C3D H3D NDP sing 463 n n 
O3D HO3N NDP sing 464 n n 
C2D O2D NDP sing 465 n n 
C2D C1D NDP sing 466 n n 
C2D H2D NDP sing 467 n n 
O2D HO2N NDP sing 468 n n 
C1D N1N NDP sing 469 n n 
C1D H1D NDP sing 470 n n 
N1N C2N NDP sing 471 n n 
N1N C6N NDP sing 472 n n 
C2N C3N NDP doub 473 n n 
C2N H2N NDP sing 474 n n 
C3N C7N NDP sing 475 n n 
C3N C4N NDP sing 476 n n 
C7N O7N NDP doub 477 n n 
C7N N7N NDP sing 478 n n 
N7N H71N NDP sing 479 n n 
N7N H72N NDP sing 480 n n 
C4N C5N NDP sing 481 n n 
C4N H41N NDP sing 482 n n 
C4N H42N NDP sing 483 n n 
C5N C6N NDP doub 484 n n 
C5N H5N NDP sing 485 n n 
C6N H6N NDP sing 486 n n 
P2B O1X NDP doub 487 n n 
P2B O2X NDP sing 488 n n 
P2B O3X NDP sing 489 n n 
O2X HOP2 NDP sing 490 n n 
O3X HOP3 NDP sing 491 n n 
#
_atom_sites.entry_id                     8QT7 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDP A 1 501 504 NDP NDP . 
C 3 FAD A 1 502 506 FAD FAD . 
D 4 HEM A 1 503 507 HEM HEM . 
E 4 HEM A 1 504 508 HEM HEM . 
F 5 HOH A 1 601 4 HOH HOH . 
F 5 HOH A 2 602 49 HOH HOH . 
F 5 HOH A 3 603 48 HOH HOH . 
F 5 HOH A 4 604 15 HOH HOH . 
F 5 HOH A 5 605 47 HOH HOH . 
F 5 HOH A 6 606 60 HOH HOH . 
F 5 HOH A 7 607 42 HOH HOH . 
F 5 HOH A 8 608 9 HOH HOH . 
F 5 HOH A 9 609 22 HOH HOH . 
F 5 HOH A 10 610 14 HOH HOH . 
F 5 HOH A 11 611 38 HOH HOH . 
F 5 HOH A 12 612 6 HOH HOH . 
F 5 HOH A 13 613 1 HOH HOH . 
F 5 HOH A 14 614 10 HOH HOH . 
F 5 HOH A 15 615 12 HOH HOH . 
F 5 HOH A 16 616 3 HOH HOH . 
F 5 HOH A 17 617 2 HOH HOH . 
F 5 HOH A 18 618 57 HOH HOH . 
F 5 HOH A 19 619 51 HOH HOH . 
F 5 HOH A 20 620 39 HOH HOH . 
F 5 HOH A 21 621 44 HOH HOH . 
F 5 HOH A 22 622 52 HOH HOH . 
F 5 HOH A 23 623 13 HOH HOH . 
F 5 HOH A 24 624 61 HOH HOH . 
F 5 HOH A 25 625 37 HOH HOH . 
F 5 HOH A 26 626 62 HOH HOH . 
F 5 HOH A 27 627 36 HOH HOH . 
F 5 HOH A 28 628 66 HOH HOH . 
F 5 HOH A 29 629 53 HOH HOH . 
F 5 HOH A 30 630 59 HOH HOH . 
F 5 HOH A 31 631 33 HOH HOH . 
F 5 HOH A 32 632 19 HOH HOH . 
F 5 HOH A 33 633 28 HOH HOH . 
F 5 HOH A 34 634 64 HOH HOH . 
F 5 HOH A 35 635 16 HOH HOH . 
F 5 HOH A 36 636 63 HOH HOH . 
F 5 HOH A 37 637 7 HOH HOH . 
F 5 HOH A 38 638 5 HOH HOH . 
F 5 HOH A 39 639 8 HOH HOH . 
F 5 HOH A 40 640 23 HOH HOH . 
F 5 HOH A 41 641 35 HOH HOH . 
F 5 HOH A 42 642 11 HOH HOH . 
F 5 HOH A 43 643 41 HOH HOH . 
F 5 HOH A 44 644 43 HOH HOH . 
F 5 HOH A 45 645 46 HOH HOH . 
F 5 HOH A 46 646 20 HOH HOH . 
F 5 HOH A 47 647 21 HOH HOH . 
F 5 HOH A 48 648 40 HOH HOH . 
F 5 HOH A 49 649 18 HOH HOH . 
F 5 HOH A 50 650 27 HOH HOH . 
F 5 HOH A 51 651 26 HOH HOH . 
F 5 HOH A 52 652 31 HOH HOH . 
F 5 HOH A 53 653 34 HOH HOH . 
F 5 HOH A 54 654 50 HOH HOH . 
F 5 HOH A 55 655 30 HOH HOH . 
F 5 HOH A 56 656 24 HOH HOH . 
F 5 HOH A 57 657 17 HOH HOH . 
F 5 HOH A 58 658 45 HOH HOH . 
F 5 HOH A 59 659 58 HOH HOH . 
F 5 HOH A 60 660 29 HOH HOH . 
F 5 HOH A 61 661 54 HOH HOH . 
F 5 HOH A 62 662 67 HOH HOH . 
F 5 HOH A 63 663 55 HOH HOH . 
F 5 HOH A 64 664 65 HOH HOH . 
F 5 HOH A 65 665 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . B 2 138.062 120.051 99.982 1 47.25 ? PA NDP 501 A 1 
HETATM 2 O O1A NDP . . . B 2 137.769 119.233 98.779 1 51.91 ? O1A NDP 501 A 1 
HETATM 3 O O2A NDP . . . B 2 139.223 119.734 100.844 1 48.82 ? O2A NDP 501 A 1 
HETATM 4 O O5B NDP . . . B 2 138.097 121.592 99.62 1 45.64 ? O5B NDP 501 A 1 
HETATM 5 C C5B NDP . . . B 2 137.331 122.119 98.529 1 38.91 ? C5B NDP 501 A 1 
HETATM 6 C C4B NDP . . . B 2 138.275 122.778 97.563 1 43.42 ? C4B NDP 501 A 1 
HETATM 7 O O4B NDP . . . B 2 139.009 123.811 98.257 1 46.92 ? O4B NDP 501 A 1 
HETATM 8 C C3B NDP . . . B 2 139.334 121.858 96.943 1 39.63 ? C3B NDP 501 A 1 
HETATM 9 O O3B NDP . . . B 2 139.362 122.034 95.543 1 40.42 ? O3B NDP 501 A 1 
HETATM 10 C C2B NDP . . . B 2 140.628 122.297 97.61 1 45.77 ? C2B NDP 501 A 1 
HETATM 11 O O2B NDP . . . B 2 141.792 122.166 96.798 1 48.79 ? O2B NDP 501 A 1 
HETATM 12 C C1B NDP . . . B 2 140.344 123.769 97.84 1 44.42 ? C1B NDP 501 A 1 
HETATM 13 N N9A NDP . . . B 2 141.181 124.327 98.885 1 46.59 ? N9A NDP 501 A 1 
HETATM 14 C C8A NDP . . . B 2 141.421 123.752 100.103 1 45.89 ? C8A NDP 501 A 1 
HETATM 15 N N7A NDP . . . B 2 142.233 124.452 100.846 1 54.73 ? N7A NDP 501 A 1 
HETATM 16 C C5A NDP . . . B 2 142.569 125.539 100.059 1 48.18 ? C5A NDP 501 A 1 
HETATM 17 C C6A NDP . . . B 2 143.395 126.649 100.29 1 52.06 ? C6A NDP 501 A 1 
HETATM 18 N N6A NDP . . . B 2 144.067 126.838 101.417 1 55.88 ? N6A NDP 501 A 1 
HETATM 19 N N1A NDP . . . B 2 143.495 127.57 99.306 1 48.73 ? N1A NDP 501 A 1 
HETATM 20 C C2A NDP . . . B 2 142.808 127.378 98.178 1 44.47 ? C2A NDP 501 A 1 
HETATM 21 N N3A NDP . . . B 2 142.01 126.371 97.849 1 48.94 ? N3A NDP 501 A 1 
HETATM 22 C C4A NDP . . . B 2 141.931 125.474 98.842 1 46.96 ? C4A NDP 501 A 1 
HETATM 23 O O3 NDP . . . B 2 136.739 120.059 100.869 1 52.88 ? O3 NDP 501 A 1 
HETATM 24 P PN NDP . . . B 2 135.447 119.131 100.989 1 41.43 ? PN NDP 501 A 1 
HETATM 25 O O1N NDP . . . B 2 134.278 119.761 100.348 1 41.55 ? O1N NDP 501 A 1 
HETATM 26 O O2N NDP . . . B 2 135.789 117.757 100.574 1 53.51 ? O2N NDP 501 A 1 
HETATM 27 O O5D NDP . . . B 2 135.249 119.156 102.566 1 54.66 ? O5D NDP 501 A 1 
HETATM 28 C C5D NDP . . . B 2 136.397 119.14 103.447 1 44.88 ? C5D NDP 501 A 1 
HETATM 29 C C4D NDP . . . B 2 135.954 119.472 104.849 1 44.14 ? C4D NDP 501 A 1 
HETATM 30 O O4D NDP . . . B 2 135.864 120.912 104.988 1 52.39 ? O4D NDP 501 A 1 
HETATM 31 C C3D NDP . . . B 2 134.596 118.904 105.285 1 46.23 ? C3D NDP 501 A 1 
HETATM 32 O O3D NDP . . . B 2 134.69 118.36 106.593 1 49.49 ? O3D NDP 501 A 1 
HETATM 33 C C2D NDP . . . B 2 133.68 120.123 105.205 1 44.78 ? C2D NDP 501 A 1 
HETATM 34 O O2D NDP . . . B 2 132.599 120.069 106.12 1 45.6 ? O2D NDP 501 A 1 
HETATM 35 C C1D NDP . . . B 2 134.61 121.296 105.484 1 44.76 ? C1D NDP 501 A 1 
HETATM 36 N N1N NDP . . . B 2 134.187 122.526 104.762 1 44.17 ? N1N NDP 501 A 1 
HETATM 37 C C2N NDP . . . B 2 133.882 123.66 105.453 1 33.88 ? C2N NDP 501 A 1 
HETATM 38 C C3N NDP . . . B 2 133.096 124.619 104.912 1 34.93 ? C3N NDP 501 A 1 
HETATM 39 C C7N NDP . . . B 2 132.831 125.804 105.726 1 37.21 ? C7N NDP 501 A 1 
HETATM 40 O O7N NDP . . . B 2 133.369 125.913 106.821 1 45.5 ? O7N NDP 501 A 1 
HETATM 41 N N7N NDP . . . B 2 132.009 126.724 105.26 1 40.39 ? N7N NDP 501 A 1 
HETATM 42 C C4N NDP . . . B 2 132.604 124.419 103.539 1 38.64 ? C4N NDP 501 A 1 
HETATM 43 C C5N NDP . . . B 2 133.401 123.456 102.777 1 41.99 ? C5N NDP 501 A 1 
HETATM 44 C C6N NDP . . . B 2 134.088 122.532 103.392 1 40.28 ? C6N NDP 501 A 1 
HETATM 45 P P2B NDP . . . B 2 142.831 121.052 97.285 1 55.3 ? P2B NDP 501 A 1 
HETATM 46 O O1X NDP . . . B 2 144.048 121.759 97.755 1 50.47 ? O1X NDP 501 A 1 
HETATM 47 O O2X NDP . . . B 2 143.107 120.172 96.115 1 48.28 ? O2X NDP 501 A 1 
HETATM 48 O O3X NDP . . . B 2 142.153 120.328 98.396 1 54.76 ? O3X NDP 501 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           48 
#