data_8QT7 # _model_server_result.job_id Re6SKwAMD4e8x0w5_keD9Q _model_server_result.datetime_utc '2024-10-10 10:22:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qt7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 8QT7 # _exptl.entry_id 8QT7 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 785.55 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QT7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QT7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 68 A HIS 69 1_555 E FE HEM . A HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc2 A NE2 HIS 82 A HIS 83 1_555 D FE HEM . A HEM 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc3 A NE2 HIS 128 A HIS 129 1_555 E FE HEM . A HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc4 A NE2 HIS 141 A HIS 142 1_555 D FE HEM . A HEM 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 8QT7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 501 504 NDP NDP . C 3 FAD A 1 502 506 FAD FAD . D 4 HEM A 1 503 507 HEM HEM . E 4 HEM A 1 504 508 HEM HEM . F 5 HOH A 1 601 4 HOH HOH . F 5 HOH A 2 602 49 HOH HOH . F 5 HOH A 3 603 48 HOH HOH . F 5 HOH A 4 604 15 HOH HOH . F 5 HOH A 5 605 47 HOH HOH . F 5 HOH A 6 606 60 HOH HOH . F 5 HOH A 7 607 42 HOH HOH . F 5 HOH A 8 608 9 HOH HOH . F 5 HOH A 9 609 22 HOH HOH . F 5 HOH A 10 610 14 HOH HOH . F 5 HOH A 11 611 38 HOH HOH . F 5 HOH A 12 612 6 HOH HOH . F 5 HOH A 13 613 1 HOH HOH . F 5 HOH A 14 614 10 HOH HOH . F 5 HOH A 15 615 12 HOH HOH . F 5 HOH A 16 616 3 HOH HOH . F 5 HOH A 17 617 2 HOH HOH . F 5 HOH A 18 618 57 HOH HOH . F 5 HOH A 19 619 51 HOH HOH . F 5 HOH A 20 620 39 HOH HOH . F 5 HOH A 21 621 44 HOH HOH . F 5 HOH A 22 622 52 HOH HOH . F 5 HOH A 23 623 13 HOH HOH . F 5 HOH A 24 624 61 HOH HOH . F 5 HOH A 25 625 37 HOH HOH . F 5 HOH A 26 626 62 HOH HOH . F 5 HOH A 27 627 36 HOH HOH . F 5 HOH A 28 628 66 HOH HOH . F 5 HOH A 29 629 53 HOH HOH . F 5 HOH A 30 630 59 HOH HOH . F 5 HOH A 31 631 33 HOH HOH . F 5 HOH A 32 632 19 HOH HOH . F 5 HOH A 33 633 28 HOH HOH . F 5 HOH A 34 634 64 HOH HOH . F 5 HOH A 35 635 16 HOH HOH . F 5 HOH A 36 636 63 HOH HOH . F 5 HOH A 37 637 7 HOH HOH . F 5 HOH A 38 638 5 HOH HOH . F 5 HOH A 39 639 8 HOH HOH . F 5 HOH A 40 640 23 HOH HOH . F 5 HOH A 41 641 35 HOH HOH . F 5 HOH A 42 642 11 HOH HOH . F 5 HOH A 43 643 41 HOH HOH . F 5 HOH A 44 644 43 HOH HOH . F 5 HOH A 45 645 46 HOH HOH . F 5 HOH A 46 646 20 HOH HOH . F 5 HOH A 47 647 21 HOH HOH . F 5 HOH A 48 648 40 HOH HOH . F 5 HOH A 49 649 18 HOH HOH . F 5 HOH A 50 650 27 HOH HOH . F 5 HOH A 51 651 26 HOH HOH . F 5 HOH A 52 652 31 HOH HOH . F 5 HOH A 53 653 34 HOH HOH . F 5 HOH A 54 654 50 HOH HOH . F 5 HOH A 55 655 30 HOH HOH . F 5 HOH A 56 656 24 HOH HOH . F 5 HOH A 57 657 17 HOH HOH . F 5 HOH A 58 658 45 HOH HOH . F 5 HOH A 59 659 58 HOH HOH . F 5 HOH A 60 660 29 HOH HOH . F 5 HOH A 61 661 54 HOH HOH . F 5 HOH A 62 662 67 HOH HOH . F 5 HOH A 63 663 55 HOH HOH . F 5 HOH A 64 664 65 HOH HOH . F 5 HOH A 65 665 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 3 131.88 113.184 112.386 1 37.19 ? PA FAD 502 A 1 HETATM 2 O O1A FAD . . . C 3 132.996 112.327 111.929 1 37.34 ? O1A FAD 502 A 1 HETATM 3 O O2A FAD . . . C 3 131.101 112.661 113.59 1 37.16 ? O2A FAD 502 A 1 HETATM 4 O O5B FAD . . . C 3 132.385 114.625 112.722 1 36.39 ? O5B FAD 502 A 1 HETATM 5 C C5B FAD . . . C 3 133.308 115.316 111.855 1 30.88 ? C5B FAD 502 A 1 HETATM 6 C C4B FAD . . . C 3 133.204 116.803 112.095 1 35.4 ? C4B FAD 502 A 1 HETATM 7 O O4B FAD . . . C 3 131.814 117.184 112.208 1 38.95 ? O4B FAD 502 A 1 HETATM 8 C C3B FAD . . . C 3 133.887 117.313 113.361 1 31.62 ? C3B FAD 502 A 1 HETATM 9 O O3B FAD . . . C 3 134.459 118.599 113.155 1 50.08 ? O3B FAD 502 A 1 HETATM 10 C C2B FAD . . . C 3 132.74 117.35 114.373 1 32.99 ? C2B FAD 502 A 1 HETATM 11 O O2B FAD . . . C 3 132.952 118.336 115.376 1 49.21 ? O2B FAD 502 A 1 HETATM 12 C C1B FAD . . . C 3 131.56 117.741 113.484 1 31.74 ? C1B FAD 502 A 1 HETATM 13 N N9A FAD . . . C 3 130.272 117.238 113.955 1 31.8 ? N9A FAD 502 A 1 HETATM 14 C C8A FAD . . . C 3 129.913 115.928 114.125 1 27.09 ? C8A FAD 502 A 1 HETATM 15 N N7A FAD . . . C 3 128.691 115.761 114.568 1 35.07 ? N7A FAD 502 A 1 HETATM 16 C C5A FAD . . . C 3 128.21 117.055 114.698 1 15.44 ? C5A FAD 502 A 1 HETATM 17 C C6A FAD . . . C 3 126.971 117.568 115.126 1 21.8 ? C6A FAD 502 A 1 HETATM 18 N N6A FAD . . . C 3 125.945 116.807 115.517 1 23.16 ? N6A FAD 502 A 1 HETATM 19 N N1A FAD . . . C 3 126.82 118.91 115.14 1 30.37 ? N1A FAD 502 A 1 HETATM 20 C C2A FAD . . . C 3 127.841 119.677 114.75 1 26.42 ? C2A FAD 502 A 1 HETATM 21 N N3A FAD . . . C 3 129.052 119.307 114.33 1 31.86 ? N3A FAD 502 A 1 HETATM 22 C C4A FAD . . . C 3 129.175 117.976 114.327 1 24.4 ? C4A FAD 502 A 1 HETATM 23 N N1 FAD . . . C 3 127.71 119.374 105.803 1 28.51 ? N1 FAD 502 A 1 HETATM 24 C C2 FAD . . . C 3 127.27 119.05 104.553 1 31.45 ? C2 FAD 502 A 1 HETATM 25 O O2 FAD . . . C 3 127.572 117.979 104.017 1 29.92 ? O2 FAD 502 A 1 HETATM 26 N N3 FAD . . . C 3 126.466 119.935 103.86 1 28.19 ? N3 FAD 502 A 1 HETATM 27 C C4 FAD . . . C 3 126.036 121.164 104.309 1 24.32 ? C4 FAD 502 A 1 HETATM 28 O O4 FAD . . . C 3 125.321 121.866 103.598 1 30.22 ? O4 FAD 502 A 1 HETATM 29 C C4X FAD . . . C 3 126.508 121.5 105.639 1 24.16 ? C4X FAD 502 A 1 HETATM 30 N N5 FAD . . . C 3 126.151 122.646 106.145 1 18.92 ? N5 FAD 502 A 1 HETATM 31 C C5X FAD . . . C 3 126.6 122.964 107.415 1 22.34 ? C5X FAD 502 A 1 HETATM 32 C C6 FAD . . . C 3 126.229 124.186 107.972 1 26.33 ? C6 FAD 502 A 1 HETATM 33 C C7 FAD . . . C 3 126.655 124.552 109.245 1 23.32 ? C7 FAD 502 A 1 HETATM 34 C C7M FAD . . . C 3 126.237 125.88 109.815 1 21.28 ? C7M FAD 502 A 1 HETATM 35 C C8 FAD . . . C 3 127.472 123.678 109.98 1 26.59 ? C8 FAD 502 A 1 HETATM 36 C C8M FAD . . . C 3 127.949 124.045 111.361 1 22 ? C8M FAD 502 A 1 HETATM 37 C C9 FAD . . . C 3 127.846 122.458 109.426 1 22.51 ? C9 FAD 502 A 1 HETATM 38 C C9A FAD . . . C 3 127.419 122.098 108.154 1 18.01 ? C9A FAD 502 A 1 HETATM 39 N N10 FAD . . . C 3 127.776 120.867 107.569 1 30.23 ? N10 FAD 502 A 1 HETATM 40 C C10 FAD . . . C 3 127.342 120.537 106.308 1 20.19 ? C10 FAD 502 A 1 HETATM 41 C C1' FAD . . . C 3 128.635 119.918 108.287 1 23.79 ? C1' FAD 502 A 1 HETATM 42 C C2' FAD . . . C 3 127.864 118.774 108.935 1 32.83 ? C2' FAD 502 A 1 HETATM 43 O O2' FAD . . . C 3 127.066 119.254 110.016 1 39.3 ? O2' FAD 502 A 1 HETATM 44 C C3' FAD . . . C 3 128.859 117.736 109.455 1 35.65 ? C3' FAD 502 A 1 HETATM 45 O O3' FAD . . . C 3 129.621 117.244 108.359 1 38.32 ? O3' FAD 502 A 1 HETATM 46 C C4' FAD . . . C 3 128.216 116.555 110.184 1 30.28 ? C4' FAD 502 A 1 HETATM 47 O O4' FAD . . . C 3 127.435 117.042 111.276 1 27.87 ? O4' FAD 502 A 1 HETATM 48 C C5' FAD . . . C 3 129.237 115.552 110.675 1 26 ? C5' FAD 502 A 1 HETATM 49 O O5' FAD . . . C 3 128.575 114.297 110.933 1 33.43 ? O5' FAD 502 A 1 HETATM 50 P P FAD . . . C 3 129.38 112.947 110.978 1 35.33 ? P FAD 502 A 1 HETATM 51 O O1P FAD . . . C 3 128.948 112.118 112.189 1 43.08 ? O1P FAD 502 A 1 HETATM 52 O O2P FAD . . . C 3 129.26 112.265 109.687 1 34.31 ? O2P FAD 502 A 1 HETATM 53 O O3P FAD . . . C 3 130.873 113.45 111.19 1 41.21 ? O3P FAD 502 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #