data_8QTA
#
_model_server_result.job_id            ll5VqyTqpm7NZasK0hShLA 
_model_server_result.datetime_utc      '2024-11-05 04:11:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qta 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    8QTA 
#
_exptl.entry_id    8QTA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8QTA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QTA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 68 A HIS 69 1_555 E FE HEM . A HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc2 A NE2 HIS 82 A HIS 83 1_555 D FE HEM . A HEM 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc3 A NE2 HIS 128 A HIS 129 1_555 E FE HEM . A HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
metalc ? metalc4 A NE2 HIS 141 A HIS 142 1_555 D FE HEM . A HEM 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     8QTA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDP A 1 501 504 NDP NDP . 
C 3 FAD A 1 502 506 FAD FAD . 
D 4 HEM A 1 503 507 HEM HEM . 
E 4 HEM A 1 504 508 HEM HEM . 
F 5 HOH A 1 601 7 HOH HOH . 
F 5 HOH A 2 602 6 HOH HOH . 
F 5 HOH A 3 603 2 HOH HOH . 
F 5 HOH A 4 604 16 HOH HOH . 
F 5 HOH A 5 605 13 HOH HOH . 
F 5 HOH A 6 606 25 HOH HOH . 
F 5 HOH A 7 607 23 HOH HOH . 
F 5 HOH A 8 608 5 HOH HOH . 
F 5 HOH A 9 609 15 HOH HOH . 
F 5 HOH A 10 610 3 HOH HOH . 
F 5 HOH A 11 611 12 HOH HOH . 
F 5 HOH A 12 612 10 HOH HOH . 
F 5 HOH A 13 613 20 HOH HOH . 
F 5 HOH A 14 614 9 HOH HOH . 
F 5 HOH A 15 615 22 HOH HOH . 
F 5 HOH A 16 616 17 HOH HOH . 
F 5 HOH A 17 617 21 HOH HOH . 
F 5 HOH A 18 618 24 HOH HOH . 
F 5 HOH A 19 619 14 HOH HOH . 
F 5 HOH A 20 620 11 HOH HOH . 
F 5 HOH A 21 621 8 HOH HOH . 
F 5 HOH A 22 622 1 HOH HOH . 
F 5 HOH A 23 623 26 HOH HOH . 
F 5 HOH A 24 624 19 HOH HOH . 
F 5 HOH A 25 625 4 HOH HOH . 
F 5 HOH A 26 626 18 HOH HOH . 
F 5 HOH A 27 627 27 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 3 125.901 135.16 134.908 1 52.65 ? PA FAD 502 A 1 
HETATM 2 O O1A FAD . . . C 3 127.127 135.769 135.468 1 41.21 ? O1A FAD 502 A 1 
HETATM 3 O O2A FAD . . . C 3 125.296 135.928 133.736 1 44.04 ? O2A FAD 502 A 1 
HETATM 4 O O5B FAD . . . C 3 126.174 133.679 134.5 1 43.5 ? O5B FAD 502 A 1 
HETATM 5 C C5B FAD . . . C 3 127.298 132.95 135.035 1 41.23 ? C5B FAD 502 A 1 
HETATM 6 C C4B FAD . . . C 3 127.005 131.472 134.984 1 43.85 ? C4B FAD 502 A 1 
HETATM 7 O O4B FAD . . . C 3 125.576 131.259 134.969 1 46.78 ? O4B FAD 502 A 1 
HETATM 8 C C3B FAD . . . C 3 127.554 130.737 133.765 1 43.85 ? C3B FAD 502 A 1 
HETATM 9 O O3B FAD . . . C 3 127.976 129.423 134.11 1 47.34 ? O3B FAD 502 A 1 
HETATM 10 C C2B FAD . . . C 3 126.358 130.725 132.81 1 41.09 ? C2B FAD 502 A 1 
HETATM 11 O O2B FAD . . . C 3 126.405 129.608 131.93 1 49.22 ? O2B FAD 502 A 1 
HETATM 12 C C1B FAD . . . C 3 125.19 130.587 133.785 1 35.07 ? C1B FAD 502 A 1 
HETATM 13 N N9A FAD . . . C 3 123.941 131.178 133.31 1 34.73 ? N9A FAD 502 A 1 
HETATM 14 C C8A FAD . . . C 3 123.681 132.506 133.108 1 34.37 ? C8A FAD 502 A 1 
HETATM 15 N N7A FAD . . . C 3 122.469 132.755 132.673 1 38.29 ? N7A FAD 502 A 1 
HETATM 16 C C5A FAD . . . C 3 121.889 131.499 132.586 1 32.76 ? C5A FAD 502 A 1 
HETATM 17 C C6A FAD . . . C 3 120.607 131.071 132.19 1 29.1 ? C6A FAD 502 A 1 
HETATM 18 N N6A FAD . . . C 3 119.638 131.897 131.787 1 36.59 ? N6A FAD 502 A 1 
HETATM 19 N N1A FAD . . . C 3 120.354 129.745 132.218 1 27.85 ? N1A FAD 502 A 1 
HETATM 20 C C2A FAD . . . C 3 121.319 128.913 132.614 1 32.07 ? C2A FAD 502 A 1 
HETATM 21 N N3A FAD . . . C 3 122.56 129.2 133.012 1 35.56 ? N3A FAD 502 A 1 
HETATM 22 C C4A FAD . . . C 3 122.784 130.518 132.975 1 32.22 ? C4A FAD 502 A 1 
HETATM 23 N N1 FAD . . . C 3 121.474 129.321 141.41 1 41.13 ? N1 FAD 502 A 1 
HETATM 24 C C2 FAD . . . C 3 121.072 129.712 142.653 1 41.79 ? C2 FAD 502 A 1 
HETATM 25 O O2 FAD . . . C 3 121.444 130.78 143.148 1 48.76 ? O2 FAD 502 A 1 
HETATM 26 N N3 FAD . . . C 3 120.228 128.9 143.385 1 31.97 ? N3 FAD 502 A 1 
HETATM 27 C C4 FAD . . . C 3 119.721 127.684 142.984 1 36.57 ? C4 FAD 502 A 1 
HETATM 28 O O4 FAD . . . C 3 118.977 127.05 143.728 1 45.18 ? O4 FAD 502 A 1 
HETATM 29 C C4X FAD . . . C 3 120.155 127.277 141.662 1 35.51 ? C4X FAD 502 A 1 
HETATM 30 N N5 FAD . . . C 3 119.724 126.137 141.199 1 35.85 ? N5 FAD 502 A 1 
HETATM 31 C C5X FAD . . . C 3 120.139 125.751 139.934 1 38.07 ? C5X FAD 502 A 1 
HETATM 32 C C6 FAD . . . C 3 119.689 124.537 139.422 1 36.66 ? C6 FAD 502 A 1 
HETATM 33 C C7 FAD . . . C 3 120.077 124.106 138.157 1 37.1 ? C7 FAD 502 A 1 
HETATM 34 C C7M FAD . . . C 3 119.574 122.787 137.637 1 41.01 ? C7M FAD 502 A 1 
HETATM 35 C C8 FAD . . . C 3 120.933 124.906 137.384 1 39.61 ? C8 FAD 502 A 1 
HETATM 36 C C8M FAD . . . C 3 121.369 124.469 136.011 1 36.38 ? C8M FAD 502 A 1 
HETATM 37 C C9 FAD . . . C 3 121.385 126.119 137.893 1 35.82 ? C9 FAD 502 A 1 
HETATM 38 C C9A FAD . . . C 3 120.995 126.545 139.157 1 37.82 ? C9A FAD 502 A 1 
HETATM 39 N N10 FAD . . . C 3 121.432 127.77 139.698 1 41.31 ? N10 FAD 502 A 1 
HETATM 40 C C10 FAD . . . C 3 121.033 128.166 140.95 1 39.96 ? C10 FAD 502 A 1 
HETATM 41 C C1' FAD . . . C 3 122.331 128.645 138.937 1 36.14 ? C1' FAD 502 A 1 
HETATM 42 C C2' FAD . . . C 3 121.607 129.791 138.241 1 41.2 ? C2' FAD 502 A 1 
HETATM 43 O O2' FAD . . . C 3 120.791 129.295 137.18 1 42.05 ? O2' FAD 502 A 1 
HETATM 44 C C3' FAD . . . C 3 122.641 130.762 137.672 1 43.54 ? C3' FAD 502 A 1 
HETATM 45 O O3' FAD . . . C 3 123.625 131.021 138.666 1 45.36 ? O3' FAD 502 A 1 
HETATM 46 C C4' FAD . . . C 3 122.057 132.093 137.205 1 35.45 ? C4' FAD 502 A 1 
HETATM 47 O O4' FAD . . . C 3 121.255 131.875 136.044 1 35.44 ? O4' FAD 502 A 1 
HETATM 48 C C5' FAD . . . C 3 123.132 133.119 136.927 1 38.32 ? C5' FAD 502 A 1 
HETATM 49 O O5' FAD . . . C 3 122.51 134.396 136.676 1 41.37 ? O5' FAD 502 A 1 
HETATM 50 P P FAD . . . C 3 123.338 135.606 136.112 1 51.04 ? P FAD 502 A 1 
HETATM 51 O O1P FAD . . . C 3 122.855 135.928 134.695 1 48.09 ? O1P FAD 502 A 1 
HETATM 52 O O2P FAD . . . C 3 123.296 136.715 137.067 1 34.53 ? O2P FAD 502 A 1 
HETATM 53 O O3P FAD . . . C 3 124.807 135.001 136.044 1 46.7 ? O3P FAD 502 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           53 
#