data_8QU2 # _model_server_result.job_id ldYOTI88syLBQ82bFW_6rA _model_server_result.datetime_utc '2025-03-04 08:22:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qu2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":202}' # _entry.id 8QU2 # _exptl.entry_id 8QU2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QU2 _cell.length_a 45.08 _cell.length_b 51.46 _cell.length_c 72.55 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QU2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 269 1_555 A N LYS 2 A LYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A C GLN 3 A GLN 271 1_555 A N NLE 4 A NLE 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C NLE 4 A NLE 272 1_555 A N HIS 5 A HIS 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale4 A CE NLE 4 A NLE 272 1_555 A CE MK8 8 A MK8 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale5 A C ILE 7 A ILE 275 1_555 A N MK8 8 A MK8 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale6 A C MK8 8 A MK8 276 1_555 A N LYS 9 A LYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 89 n n C1 C2 EDO sing 90 n n C1 H11 EDO sing 91 n n C1 H12 EDO sing 92 n n O1 HO1 EDO sing 93 n n C2 O2 EDO sing 94 n n C2 H21 EDO sing 95 n n C2 H22 EDO sing 96 n n O2 HO2 EDO sing 97 n n # _atom_sites.entry_id 8QU2 _atom_sites.fract_transf_matrix[1][1] 0.022183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019433 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013784 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 TRS A 1 301 301 TRS TRS . E 5 FMT A 1 302 1 FMT FMT . F 5 FMT B 1 201 201 FMT FMT . G 6 EDO C 1 201 201 EDO EDO . H 6 EDO C 1 202 202 EDO EDO . I 7 HOH A 1 401 119 HOH HOH . I 7 HOH A 2 402 43 HOH HOH . I 7 HOH A 3 403 77 HOH HOH . I 7 HOH A 4 404 68 HOH HOH . I 7 HOH A 5 405 107 HOH HOH . I 7 HOH A 6 406 99 HOH HOH . I 7 HOH A 7 407 9 HOH HOH . I 7 HOH A 8 408 22 HOH HOH . I 7 HOH A 9 409 38 HOH HOH . I 7 HOH A 10 410 67 HOH HOH . I 7 HOH A 11 411 37 HOH HOH . I 7 HOH A 12 412 28 HOH HOH . I 7 HOH A 13 413 79 HOH HOH . I 7 HOH A 14 414 57 HOH HOH . I 7 HOH A 15 415 66 HOH HOH . I 7 HOH A 16 416 120 HOH HOH . J 7 HOH B 1 301 118 HOH HOH . J 7 HOH B 2 302 138 HOH HOH . J 7 HOH B 3 303 133 HOH HOH . J 7 HOH B 4 304 55 HOH HOH . J 7 HOH B 5 305 51 HOH HOH . J 7 HOH B 6 306 131 HOH HOH . J 7 HOH B 7 307 27 HOH HOH . J 7 HOH B 8 308 95 HOH HOH . J 7 HOH B 9 309 10 HOH HOH . J 7 HOH B 10 310 94 HOH HOH . J 7 HOH B 11 311 73 HOH HOH . J 7 HOH B 12 312 6 HOH HOH . J 7 HOH B 13 313 44 HOH HOH . J 7 HOH B 14 314 2 HOH HOH . J 7 HOH B 15 315 71 HOH HOH . J 7 HOH B 16 316 18 HOH HOH . J 7 HOH B 17 317 5 HOH HOH . J 7 HOH B 18 318 39 HOH HOH . J 7 HOH B 19 319 1 HOH HOH . J 7 HOH B 20 320 35 HOH HOH . J 7 HOH B 21 321 90 HOH HOH . J 7 HOH B 22 322 47 HOH HOH . J 7 HOH B 23 323 23 HOH HOH . J 7 HOH B 24 324 19 HOH HOH . J 7 HOH B 25 325 7 HOH HOH . J 7 HOH B 26 326 45 HOH HOH . J 7 HOH B 27 327 49 HOH HOH . J 7 HOH B 28 328 70 HOH HOH . J 7 HOH B 29 329 92 HOH HOH . J 7 HOH B 30 330 13 HOH HOH . J 7 HOH B 31 331 60 HOH HOH . J 7 HOH B 32 332 113 HOH HOH . J 7 HOH B 33 333 109 HOH HOH . J 7 HOH B 34 334 24 HOH HOH . J 7 HOH B 35 335 69 HOH HOH . J 7 HOH B 36 336 100 HOH HOH . J 7 HOH B 37 337 21 HOH HOH . J 7 HOH B 38 338 83 HOH HOH . J 7 HOH B 39 339 8 HOH HOH . J 7 HOH B 40 340 52 HOH HOH . J 7 HOH B 41 341 82 HOH HOH . J 7 HOH B 42 342 136 HOH HOH . J 7 HOH B 43 343 32 HOH HOH . J 7 HOH B 44 344 40 HOH HOH . J 7 HOH B 45 345 137 HOH HOH . J 7 HOH B 46 346 97 HOH HOH . J 7 HOH B 47 347 125 HOH HOH . J 7 HOH B 48 348 96 HOH HOH . J 7 HOH B 49 349 132 HOH HOH . J 7 HOH B 50 350 81 HOH HOH . J 7 HOH B 51 351 50 HOH HOH . J 7 HOH B 52 352 48 HOH HOH . J 7 HOH B 53 353 54 HOH HOH . J 7 HOH B 54 354 85 HOH HOH . J 7 HOH B 55 355 41 HOH HOH . J 7 HOH B 56 356 108 HOH HOH . J 7 HOH B 57 357 102 HOH HOH . J 7 HOH B 58 358 84 HOH HOH . J 7 HOH B 59 359 114 HOH HOH . J 7 HOH B 60 360 101 HOH HOH . J 7 HOH B 61 361 87 HOH HOH . J 7 HOH B 62 362 86 HOH HOH . J 7 HOH B 63 363 121 HOH HOH . K 7 HOH C 1 301 135 HOH HOH . K 7 HOH C 2 302 106 HOH HOH . K 7 HOH C 3 303 129 HOH HOH . K 7 HOH C 4 304 3 HOH HOH . K 7 HOH C 5 305 117 HOH HOH . K 7 HOH C 6 306 46 HOH HOH . K 7 HOH C 7 307 103 HOH HOH . K 7 HOH C 8 308 91 HOH HOH . K 7 HOH C 9 309 53 HOH HOH . K 7 HOH C 10 310 124 HOH HOH . K 7 HOH C 11 311 33 HOH HOH . K 7 HOH C 12 312 36 HOH HOH . K 7 HOH C 13 313 30 HOH HOH . K 7 HOH C 14 314 12 HOH HOH . K 7 HOH C 15 315 4 HOH HOH . K 7 HOH C 16 316 105 HOH HOH . K 7 HOH C 17 317 34 HOH HOH . K 7 HOH C 18 318 64 HOH HOH . K 7 HOH C 19 319 65 HOH HOH . K 7 HOH C 20 320 56 HOH HOH . K 7 HOH C 21 321 88 HOH HOH . K 7 HOH C 22 322 31 HOH HOH . K 7 HOH C 23 323 59 HOH HOH . K 7 HOH C 24 324 89 HOH HOH . K 7 HOH C 25 325 75 HOH HOH . K 7 HOH C 26 326 104 HOH HOH . K 7 HOH C 27 327 58 HOH HOH . K 7 HOH C 28 328 126 HOH HOH . K 7 HOH C 29 329 14 HOH HOH . K 7 HOH C 30 330 17 HOH HOH . K 7 HOH C 31 331 127 HOH HOH . K 7 HOH C 32 332 139 HOH HOH . K 7 HOH C 33 333 15 HOH HOH . K 7 HOH C 34 334 26 HOH HOH . K 7 HOH C 35 335 111 HOH HOH . K 7 HOH C 36 336 62 HOH HOH . K 7 HOH C 37 337 110 HOH HOH . K 7 HOH C 38 338 20 HOH HOH . K 7 HOH C 39 339 16 HOH HOH . K 7 HOH C 40 340 78 HOH HOH . K 7 HOH C 41 341 116 HOH HOH . K 7 HOH C 42 342 112 HOH HOH . K 7 HOH C 43 343 76 HOH HOH . K 7 HOH C 44 344 29 HOH HOH . K 7 HOH C 45 345 128 HOH HOH . K 7 HOH C 46 346 80 HOH HOH . K 7 HOH C 47 347 98 HOH HOH . K 7 HOH C 48 348 25 HOH HOH . K 7 HOH C 49 349 123 HOH HOH . K 7 HOH C 50 350 61 HOH HOH . K 7 HOH C 51 351 42 HOH HOH . K 7 HOH C 52 352 122 HOH HOH . K 7 HOH C 53 353 93 HOH HOH . K 7 HOH C 54 354 74 HOH HOH . K 7 HOH C 55 355 11 HOH HOH . K 7 HOH C 56 356 72 HOH HOH . K 7 HOH C 57 357 130 HOH HOH . K 7 HOH C 58 358 115 HOH HOH . K 7 HOH C 59 359 63 HOH HOH . K 7 HOH C 60 360 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 6 5.449 12.258 -19.363 1 50.91 ? C1 EDO 202 C 1 HETATM 2 O O1 EDO . . . H 6 5.629 13.492 -20.07 1 47.92 ? O1 EDO 202 C 1 HETATM 3 C C2 EDO . . . H 6 4.002 12.139 -18.905 1 45.39 ? C2 EDO 202 C 1 HETATM 4 O O2 EDO . . . H 6 3.882 11.132 -17.892 1 42.16 ? O2 EDO 202 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #