data_8QU3 # _model_server_result.job_id LqZW9zB0G7rsc2Fnuk3Qkg _model_server_result.datetime_utc '2024-12-26 11:35:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 8QU3 # _exptl.entry_id 8QU3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QU3 _cell.length_a 44.75 _cell.length_b 51.39 _cell.length_c 72.56 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 269 1_555 A N LYS 2 A LYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale2 A C GLN 3 A GLN 271 1_555 A N NLE 4 A NLE 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C NLE 4 A NLE 272 1_555 A N HIS 5 A HIS 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale4 A CE NLE 4 A NLE 272 1_555 A CE MK8 8 A MK8 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C ILE 7 A ILE 275 1_555 A N MK8 8 A MK8 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale6 A C MK8 8 A MK8 276 1_555 A N LYS 9 A LYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 A C ARG 14 A ARG 282 1_555 A N NH2 15 A NH2 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 391 n n C C2 TRS sing 392 n n C C3 TRS sing 393 n n C N TRS sing 394 n n C1 O1 TRS sing 395 n n C1 H11 TRS sing 396 n n C1 H12 TRS sing 397 n n C2 O2 TRS sing 398 n n C2 H21 TRS sing 399 n n C2 H22 TRS sing 400 n n C3 O3 TRS sing 401 n n C3 H31 TRS sing 402 n n C3 H32 TRS sing 403 n n N HN1 TRS sing 404 n n N HN2 TRS sing 405 n n N HN3 TRS sing 406 n n O1 HO1 TRS sing 407 n n O2 HO2 TRS sing 408 n n O3 HO3 TRS sing 409 n n # _atom_sites.entry_id 8QU3 _atom_sites.fract_transf_matrix[1][1] 0.022346 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 TRS A 1 301 1 TRS TRS . E 5 FMT C 1 201 7 FMT FMT . F 6 HOH A 1 401 89 HOH HOH . F 6 HOH A 2 402 42 HOH HOH . F 6 HOH A 3 403 68 HOH HOH . F 6 HOH A 4 404 16 HOH HOH . F 6 HOH A 5 405 73 HOH HOH . F 6 HOH A 6 406 27 HOH HOH . F 6 HOH A 7 407 59 HOH HOH . F 6 HOH A 8 408 80 HOH HOH . F 6 HOH A 9 409 47 HOH HOH . F 6 HOH A 10 410 67 HOH HOH . F 6 HOH A 11 411 88 HOH HOH . F 6 HOH A 12 412 85 HOH HOH . F 6 HOH A 13 413 74 HOH HOH . F 6 HOH A 14 414 91 HOH HOH . F 6 HOH A 15 415 128 HOH HOH . F 6 HOH A 16 416 106 HOH HOH . G 6 HOH B 1 201 82 HOH HOH . G 6 HOH B 2 202 51 HOH HOH . G 6 HOH B 3 203 78 HOH HOH . G 6 HOH B 4 204 133 HOH HOH . G 6 HOH B 5 205 110 HOH HOH . G 6 HOH B 6 206 113 HOH HOH . G 6 HOH B 7 207 29 HOH HOH . G 6 HOH B 8 208 35 HOH HOH . G 6 HOH B 9 209 100 HOH HOH . G 6 HOH B 10 210 40 HOH HOH . G 6 HOH B 11 211 76 HOH HOH . G 6 HOH B 12 212 33 HOH HOH . G 6 HOH B 13 213 52 HOH HOH . G 6 HOH B 14 214 77 HOH HOH . G 6 HOH B 15 215 94 HOH HOH . G 6 HOH B 16 216 111 HOH HOH . G 6 HOH B 17 217 115 HOH HOH . G 6 HOH B 18 218 125 HOH HOH . G 6 HOH B 19 219 84 HOH HOH . G 6 HOH B 20 220 4 HOH HOH . G 6 HOH B 21 221 49 HOH HOH . G 6 HOH B 22 222 55 HOH HOH . G 6 HOH B 23 223 101 HOH HOH . G 6 HOH B 24 224 22 HOH HOH . G 6 HOH B 25 225 71 HOH HOH . G 6 HOH B 26 226 99 HOH HOH . G 6 HOH B 27 227 18 HOH HOH . G 6 HOH B 28 228 23 HOH HOH . G 6 HOH B 29 229 131 HOH HOH . G 6 HOH B 30 230 83 HOH HOH . G 6 HOH B 31 231 26 HOH HOH . G 6 HOH B 32 232 117 HOH HOH . G 6 HOH B 33 233 13 HOH HOH . G 6 HOH B 34 234 134 HOH HOH . G 6 HOH B 35 235 8 HOH HOH . G 6 HOH B 36 236 116 HOH HOH . G 6 HOH B 37 237 14 HOH HOH . G 6 HOH B 38 238 108 HOH HOH . G 6 HOH B 39 239 25 HOH HOH . G 6 HOH B 40 240 38 HOH HOH . G 6 HOH B 41 241 79 HOH HOH . G 6 HOH B 42 242 48 HOH HOH . G 6 HOH B 43 243 12 HOH HOH . G 6 HOH B 44 244 75 HOH HOH . G 6 HOH B 45 245 123 HOH HOH . G 6 HOH B 46 246 130 HOH HOH . G 6 HOH B 47 247 53 HOH HOH . G 6 HOH B 48 248 32 HOH HOH . G 6 HOH B 49 249 6 HOH HOH . G 6 HOH B 50 250 112 HOH HOH . G 6 HOH B 51 251 92 HOH HOH . G 6 HOH B 52 252 7 HOH HOH . G 6 HOH B 53 253 129 HOH HOH . G 6 HOH B 54 254 105 HOH HOH . G 6 HOH B 55 255 15 HOH HOH . G 6 HOH B 56 256 81 HOH HOH . G 6 HOH B 57 257 39 HOH HOH . H 6 HOH C 1 301 57 HOH HOH . H 6 HOH C 2 302 122 HOH HOH . H 6 HOH C 3 303 64 HOH HOH . H 6 HOH C 4 304 62 HOH HOH . H 6 HOH C 5 305 19 HOH HOH . H 6 HOH C 6 306 2 HOH HOH . H 6 HOH C 7 307 10 HOH HOH . H 6 HOH C 8 308 30 HOH HOH . H 6 HOH C 9 309 54 HOH HOH . H 6 HOH C 10 310 114 HOH HOH . H 6 HOH C 11 311 17 HOH HOH . H 6 HOH C 12 312 135 HOH HOH . H 6 HOH C 13 313 65 HOH HOH . H 6 HOH C 14 314 20 HOH HOH . H 6 HOH C 15 315 1 HOH HOH . H 6 HOH C 16 316 72 HOH HOH . H 6 HOH C 17 317 9 HOH HOH . H 6 HOH C 18 318 3 HOH HOH . H 6 HOH C 19 319 43 HOH HOH . H 6 HOH C 20 320 63 HOH HOH . H 6 HOH C 21 321 124 HOH HOH . H 6 HOH C 22 322 58 HOH HOH . H 6 HOH C 23 323 132 HOH HOH . H 6 HOH C 24 324 5 HOH HOH . H 6 HOH C 25 325 102 HOH HOH . H 6 HOH C 26 326 11 HOH HOH . H 6 HOH C 27 327 45 HOH HOH . H 6 HOH C 28 328 69 HOH HOH . H 6 HOH C 29 329 44 HOH HOH . H 6 HOH C 30 330 103 HOH HOH . H 6 HOH C 31 331 28 HOH HOH . H 6 HOH C 32 332 70 HOH HOH . H 6 HOH C 33 333 34 HOH HOH . H 6 HOH C 34 334 21 HOH HOH . H 6 HOH C 35 335 50 HOH HOH . H 6 HOH C 36 336 109 HOH HOH . H 6 HOH C 37 337 31 HOH HOH . H 6 HOH C 38 338 98 HOH HOH . H 6 HOH C 39 339 46 HOH HOH . H 6 HOH C 40 340 24 HOH HOH . H 6 HOH C 41 341 119 HOH HOH . H 6 HOH C 42 342 66 HOH HOH . H 6 HOH C 43 343 95 HOH HOH . H 6 HOH C 44 344 97 HOH HOH . H 6 HOH C 45 345 36 HOH HOH . H 6 HOH C 46 346 56 HOH HOH . H 6 HOH C 47 347 60 HOH HOH . H 6 HOH C 48 348 118 HOH HOH . H 6 HOH C 49 349 120 HOH HOH . H 6 HOH C 50 350 37 HOH HOH . H 6 HOH C 51 351 96 HOH HOH . H 6 HOH C 52 352 86 HOH HOH . H 6 HOH C 53 353 87 HOH HOH . H 6 HOH C 54 354 127 HOH HOH . H 6 HOH C 55 355 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . D 4 13.715 -17.689 -34.041 1 51.21 ? C TRS 301 A 1 HETATM 2 C C1 TRS . . . D 4 12.603 -18.648 -34.501 1 52.16 ? C1 TRS 301 A 1 HETATM 3 C C2 TRS . . . D 4 13.197 -16.267 -34.078 1 51.2 ? C2 TRS 301 A 1 HETATM 4 C C3 TRS . . . D 4 14.913 -17.781 -34.992 1 50.58 ? C3 TRS 301 A 1 HETATM 5 N N TRS . . . D 4 14.135 -17.941 -32.654 1 50 ? N TRS 301 A 1 HETATM 6 O O1 TRS . . . D 4 12.925 -20.041 -34.487 1 52.5 ? O1 TRS 301 A 1 HETATM 7 O O2 TRS . . . D 4 14.096 -15.535 -33.281 1 52.51 ? O2 TRS 301 A 1 HETATM 8 O O3 TRS . . . D 4 15.924 -18.713 -34.653 1 50.05 ? O3 TRS 301 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 732 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 8 #