data_8QU4 # _model_server_result.job_id OTa2YCfTpMxcKNjXzJDASA _model_server_result.datetime_utc '2025-03-04 08:57:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qu4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 8QU4 # _exptl.entry_id 8QU4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QU4 _cell.length_a 44.45 _cell.length_b 51.4 _cell.length_c 71.91 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QU4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 269 1_555 A N LYS 2 A LYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C GLN 3 A GLN 271 1_555 A N NLE 4 A NLE 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C NLE 4 A NLE 272 1_555 A N HIS 5 A HIS 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale4 A CE NLE 4 A NLE 272 1_555 A CE MK8 8 A MK8 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale5 A C ILE 7 A ILE 275 1_555 A N MK8 8 A MK8 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MK8 8 A MK8 276 1_555 A N LYS 9 A LYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 A C ARG 14 A ARG 282 1_555 A N NH2 15 A NH2 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 396 n n C C2 TRS sing 397 n n C C3 TRS sing 398 n n C N TRS sing 399 n n C1 O1 TRS sing 400 n n C1 H11 TRS sing 401 n n C1 H12 TRS sing 402 n n C2 O2 TRS sing 403 n n C2 H21 TRS sing 404 n n C2 H22 TRS sing 405 n n C3 O3 TRS sing 406 n n C3 H31 TRS sing 407 n n C3 H32 TRS sing 408 n n N HN1 TRS sing 409 n n N HN2 TRS sing 410 n n N HN3 TRS sing 411 n n O1 HO1 TRS sing 412 n n O2 HO2 TRS sing 413 n n O3 HO3 TRS sing 414 n n # _atom_sites.entry_id 8QU4 _atom_sites.fract_transf_matrix[1][1] 0.022497 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019455 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO C 1 201 202 EDO EDO . E 5 TRS C 1 202 1 TRS TRS . F 6 HOH A 1 301 87 HOH HOH . F 6 HOH A 2 302 58 HOH HOH . F 6 HOH A 3 303 19 HOH HOH . F 6 HOH A 4 304 33 HOH HOH . G 6 HOH B 1 201 74 HOH HOH . G 6 HOH B 2 202 82 HOH HOH . G 6 HOH B 3 203 14 HOH HOH . G 6 HOH B 4 204 1 HOH HOH . G 6 HOH B 5 205 46 HOH HOH . G 6 HOH B 6 206 29 HOH HOH . G 6 HOH B 7 207 83 HOH HOH . G 6 HOH B 8 208 4 HOH HOH . G 6 HOH B 9 209 21 HOH HOH . G 6 HOH B 10 210 27 HOH HOH . G 6 HOH B 11 211 76 HOH HOH . G 6 HOH B 12 212 23 HOH HOH . G 6 HOH B 13 213 35 HOH HOH . G 6 HOH B 14 214 24 HOH HOH . G 6 HOH B 15 215 31 HOH HOH . G 6 HOH B 16 216 62 HOH HOH . G 6 HOH B 17 217 75 HOH HOH . G 6 HOH B 18 218 56 HOH HOH . G 6 HOH B 19 219 70 HOH HOH . G 6 HOH B 20 220 43 HOH HOH . G 6 HOH B 21 221 79 HOH HOH . G 6 HOH B 22 222 54 HOH HOH . G 6 HOH B 23 223 32 HOH HOH . G 6 HOH B 24 224 41 HOH HOH . G 6 HOH B 25 225 28 HOH HOH . G 6 HOH B 26 226 15 HOH HOH . G 6 HOH B 27 227 16 HOH HOH . G 6 HOH B 28 228 48 HOH HOH . G 6 HOH B 29 229 8 HOH HOH . G 6 HOH B 30 230 13 HOH HOH . G 6 HOH B 31 231 77 HOH HOH . G 6 HOH B 32 232 69 HOH HOH . G 6 HOH B 33 233 68 HOH HOH . G 6 HOH B 34 234 90 HOH HOH . G 6 HOH B 35 235 53 HOH HOH . G 6 HOH B 36 236 7 HOH HOH . G 6 HOH B 37 237 61 HOH HOH . G 6 HOH B 38 238 6 HOH HOH . G 6 HOH B 39 239 44 HOH HOH . G 6 HOH B 40 240 80 HOH HOH . G 6 HOH B 41 241 50 HOH HOH . G 6 HOH B 42 242 17 HOH HOH . G 6 HOH B 43 243 55 HOH HOH . G 6 HOH B 44 244 59 HOH HOH . H 6 HOH C 1 301 72 HOH HOH . H 6 HOH C 2 302 2 HOH HOH . H 6 HOH C 3 303 88 HOH HOH . H 6 HOH C 4 304 86 HOH HOH . H 6 HOH C 5 305 52 HOH HOH . H 6 HOH C 6 306 36 HOH HOH . H 6 HOH C 7 307 18 HOH HOH . H 6 HOH C 8 308 10 HOH HOH . H 6 HOH C 9 309 81 HOH HOH . H 6 HOH C 10 310 11 HOH HOH . H 6 HOH C 11 311 20 HOH HOH . H 6 HOH C 12 312 9 HOH HOH . H 6 HOH C 13 313 3 HOH HOH . H 6 HOH C 14 314 60 HOH HOH . H 6 HOH C 15 315 84 HOH HOH . H 6 HOH C 16 316 78 HOH HOH . H 6 HOH C 17 317 22 HOH HOH . H 6 HOH C 18 318 51 HOH HOH . H 6 HOH C 19 319 25 HOH HOH . H 6 HOH C 20 320 71 HOH HOH . H 6 HOH C 21 321 26 HOH HOH . H 6 HOH C 22 322 66 HOH HOH . H 6 HOH C 23 323 5 HOH HOH . H 6 HOH C 24 324 63 HOH HOH . H 6 HOH C 25 325 45 HOH HOH . H 6 HOH C 26 326 30 HOH HOH . H 6 HOH C 27 327 38 HOH HOH . H 6 HOH C 28 328 34 HOH HOH . H 6 HOH C 29 329 89 HOH HOH . H 6 HOH C 30 330 67 HOH HOH . H 6 HOH C 31 331 42 HOH HOH . H 6 HOH C 32 332 47 HOH HOH . H 6 HOH C 33 333 40 HOH HOH . H 6 HOH C 34 334 73 HOH HOH . H 6 HOH C 35 335 37 HOH HOH . H 6 HOH C 36 336 49 HOH HOH . H 6 HOH C 37 337 85 HOH HOH . H 6 HOH C 38 338 39 HOH HOH . H 6 HOH C 39 339 64 HOH HOH . H 6 HOH C 40 340 12 HOH HOH . H 6 HOH C 41 341 65 HOH HOH . H 6 HOH C 42 342 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . E 5 12.814 -17.599 -33.928 1 49.19 ? C TRS 202 C 1 HETATM 2 C C1 TRS . . . E 5 12.195 -16.206 -33.876 1 48.22 ? C1 TRS 202 C 1 HETATM 3 C C2 TRS . . . E 5 13.096 -18.123 -32.527 1 50.22 ? C2 TRS 202 C 1 HETATM 4 C C3 TRS . . . E 5 14.114 -17.574 -34.719 1 47.66 ? C3 TRS 202 C 1 HETATM 5 N N TRS . . . E 5 11.872 -18.499 -34.597 1 50.28 ? N TRS 202 C 1 HETATM 6 O O1 TRS . . . E 5 10.846 -16.3 -33.469 1 47.72 ? O1 TRS 202 C 1 HETATM 7 O O2 TRS . . . E 5 14.385 -17.716 -32.129 1 51.2 ? O2 TRS 202 C 1 HETATM 8 O O3 TRS . . . E 5 14.844 -18.771 -34.559 1 46.44 ? O3 TRS 202 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #