data_8QUK # _model_server_result.job_id uc1vOmgObjBIswVDUwXmBw _model_server_result.datetime_utc '2024-11-25 11:37:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8quk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8QUK # _exptl.entry_id 8QUK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8QUK _cell.length_a 90.61 _cell.length_b 90.61 _cell.length_c 56.8 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QUK _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 6 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 14 1_555 A SG CYS 45 A CYS 45 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? disulf ? disulf2 A SG CYS 198 A CYS 198 1_555 A SG CYS 218 A CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8QUK _atom_sites.fract_transf_matrix[1][1] 0.011036 _atom_sites.fract_transf_matrix[1][2] 0.006372 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 301 EDO EDO . C 2 EDO A 1 302 401 EDO EDO . D 3 WVU A 1 303 501 WVU LIG . E 4 HOH A 1 401 204 HOH HOH . E 4 HOH A 2 402 156 HOH HOH . E 4 HOH A 3 403 23 HOH HOH . E 4 HOH A 4 404 25 HOH HOH . E 4 HOH A 5 405 60 HOH HOH . E 4 HOH A 6 406 262 HOH HOH . E 4 HOH A 7 407 74 HOH HOH . E 4 HOH A 8 408 181 HOH HOH . E 4 HOH A 9 409 143 HOH HOH . E 4 HOH A 10 410 220 HOH HOH . E 4 HOH A 11 411 88 HOH HOH . E 4 HOH A 12 412 122 HOH HOH . E 4 HOH A 13 413 241 HOH HOH . E 4 HOH A 14 414 33 HOH HOH . E 4 HOH A 15 415 271 HOH HOH . E 4 HOH A 16 416 61 HOH HOH . E 4 HOH A 17 417 101 HOH HOH . E 4 HOH A 18 418 211 HOH HOH . E 4 HOH A 19 419 139 HOH HOH . E 4 HOH A 20 420 56 HOH HOH . E 4 HOH A 21 421 108 HOH HOH . E 4 HOH A 22 422 109 HOH HOH . E 4 HOH A 23 423 86 HOH HOH . E 4 HOH A 24 424 221 HOH HOH . E 4 HOH A 25 425 228 HOH HOH . E 4 HOH A 26 426 189 HOH HOH . E 4 HOH A 27 427 94 HOH HOH . E 4 HOH A 28 428 51 HOH HOH . E 4 HOH A 29 429 173 HOH HOH . E 4 HOH A 30 430 135 HOH HOH . E 4 HOH A 31 431 85 HOH HOH . E 4 HOH A 32 432 3 HOH HOH . E 4 HOH A 33 433 226 HOH HOH . E 4 HOH A 34 434 50 HOH HOH . E 4 HOH A 35 435 114 HOH HOH . E 4 HOH A 36 436 113 HOH HOH . E 4 HOH A 37 437 62 HOH HOH . E 4 HOH A 38 438 147 HOH HOH . E 4 HOH A 39 439 35 HOH HOH . E 4 HOH A 40 440 47 HOH HOH . E 4 HOH A 41 441 78 HOH HOH . E 4 HOH A 42 442 38 HOH HOH . E 4 HOH A 43 443 91 HOH HOH . E 4 HOH A 44 444 41 HOH HOH . E 4 HOH A 45 445 100 HOH HOH . E 4 HOH A 46 446 16 HOH HOH . E 4 HOH A 47 447 116 HOH HOH . E 4 HOH A 48 448 30 HOH HOH . E 4 HOH A 49 449 293 HOH HOH . E 4 HOH A 50 450 5 HOH HOH . E 4 HOH A 51 451 203 HOH HOH . E 4 HOH A 52 452 58 HOH HOH . E 4 HOH A 53 453 55 HOH HOH . E 4 HOH A 54 454 264 HOH HOH . E 4 HOH A 55 455 22 HOH HOH . E 4 HOH A 56 456 104 HOH HOH . E 4 HOH A 57 457 53 HOH HOH . E 4 HOH A 58 458 107 HOH HOH . E 4 HOH A 59 459 72 HOH HOH . E 4 HOH A 60 460 49 HOH HOH . E 4 HOH A 61 461 98 HOH HOH . E 4 HOH A 62 462 288 HOH HOH . E 4 HOH A 63 463 259 HOH HOH . E 4 HOH A 64 464 4 HOH HOH . E 4 HOH A 65 465 52 HOH HOH . E 4 HOH A 66 466 206 HOH HOH . E 4 HOH A 67 467 133 HOH HOH . E 4 HOH A 68 468 67 HOH HOH . E 4 HOH A 69 469 106 HOH HOH . E 4 HOH A 70 470 164 HOH HOH . E 4 HOH A 71 471 144 HOH HOH . E 4 HOH A 72 472 45 HOH HOH . E 4 HOH A 73 473 14 HOH HOH . E 4 HOH A 74 474 26 HOH HOH . E 4 HOH A 75 475 1 HOH HOH . E 4 HOH A 76 476 231 HOH HOH . E 4 HOH A 77 477 125 HOH HOH . E 4 HOH A 78 478 48 HOH HOH . E 4 HOH A 79 479 82 HOH HOH . E 4 HOH A 80 480 68 HOH HOH . E 4 HOH A 81 481 64 HOH HOH . E 4 HOH A 82 482 73 HOH HOH . E 4 HOH A 83 483 217 HOH HOH . E 4 HOH A 84 484 37 HOH HOH . E 4 HOH A 85 485 11 HOH HOH . E 4 HOH A 86 486 87 HOH HOH . E 4 HOH A 87 487 174 HOH HOH . E 4 HOH A 88 488 79 HOH HOH . E 4 HOH A 89 489 17 HOH HOH . E 4 HOH A 90 490 97 HOH HOH . E 4 HOH A 91 491 123 HOH HOH . E 4 HOH A 92 492 54 HOH HOH . E 4 HOH A 93 493 99 HOH HOH . E 4 HOH A 94 494 15 HOH HOH . E 4 HOH A 95 495 31 HOH HOH . E 4 HOH A 96 496 9 HOH HOH . E 4 HOH A 97 497 160 HOH HOH . E 4 HOH A 98 498 140 HOH HOH . E 4 HOH A 99 499 117 HOH HOH . E 4 HOH A 100 500 285 HOH HOH . E 4 HOH A 101 501 96 HOH HOH . E 4 HOH A 102 502 146 HOH HOH . E 4 HOH A 103 503 20 HOH HOH . E 4 HOH A 104 504 192 HOH HOH . E 4 HOH A 105 505 71 HOH HOH . E 4 HOH A 106 506 12 HOH HOH . E 4 HOH A 107 507 149 HOH HOH . E 4 HOH A 108 508 6 HOH HOH . E 4 HOH A 109 509 102 HOH HOH . E 4 HOH A 110 510 10 HOH HOH . E 4 HOH A 111 511 39 HOH HOH . E 4 HOH A 112 512 131 HOH HOH . E 4 HOH A 113 513 130 HOH HOH . E 4 HOH A 114 514 75 HOH HOH . E 4 HOH A 115 515 2 HOH HOH . E 4 HOH A 116 516 42 HOH HOH . E 4 HOH A 117 517 214 HOH HOH . E 4 HOH A 118 518 21 HOH HOH . E 4 HOH A 119 519 152 HOH HOH . E 4 HOH A 120 520 34 HOH HOH . E 4 HOH A 121 521 190 HOH HOH . E 4 HOH A 122 522 46 HOH HOH . E 4 HOH A 123 523 27 HOH HOH . E 4 HOH A 124 524 136 HOH HOH . E 4 HOH A 125 525 188 HOH HOH . E 4 HOH A 126 526 7 HOH HOH . E 4 HOH A 127 527 66 HOH HOH . E 4 HOH A 128 528 205 HOH HOH . E 4 HOH A 129 529 254 HOH HOH . E 4 HOH A 130 530 268 HOH HOH . E 4 HOH A 131 531 162 HOH HOH . E 4 HOH A 132 532 222 HOH HOH . E 4 HOH A 133 533 29 HOH HOH . E 4 HOH A 134 534 110 HOH HOH . E 4 HOH A 135 535 167 HOH HOH . E 4 HOH A 136 536 89 HOH HOH . E 4 HOH A 137 537 103 HOH HOH . E 4 HOH A 138 538 142 HOH HOH . E 4 HOH A 139 539 63 HOH HOH . E 4 HOH A 140 540 28 HOH HOH . E 4 HOH A 141 541 36 HOH HOH . E 4 HOH A 142 542 186 HOH HOH . E 4 HOH A 143 543 77 HOH HOH . E 4 HOH A 144 544 13 HOH HOH . E 4 HOH A 145 545 134 HOH HOH . E 4 HOH A 146 546 32 HOH HOH . E 4 HOH A 147 547 121 HOH HOH . E 4 HOH A 148 548 8 HOH HOH . E 4 HOH A 149 549 92 HOH HOH . E 4 HOH A 150 550 194 HOH HOH . E 4 HOH A 151 551 43 HOH HOH . E 4 HOH A 152 552 137 HOH HOH . E 4 HOH A 153 553 69 HOH HOH . E 4 HOH A 154 554 196 HOH HOH . E 4 HOH A 155 555 272 HOH HOH . E 4 HOH A 156 556 172 HOH HOH . E 4 HOH A 157 557 59 HOH HOH . E 4 HOH A 158 558 19 HOH HOH . E 4 HOH A 159 559 138 HOH HOH . E 4 HOH A 160 560 210 HOH HOH . E 4 HOH A 161 561 185 HOH HOH . E 4 HOH A 162 562 269 HOH HOH . E 4 HOH A 163 563 184 HOH HOH . E 4 HOH A 164 564 198 HOH HOH . E 4 HOH A 165 565 244 HOH HOH . E 4 HOH A 166 566 284 HOH HOH . E 4 HOH A 167 567 289 HOH HOH . E 4 HOH A 168 568 115 HOH HOH . E 4 HOH A 169 569 112 HOH HOH . E 4 HOH A 170 570 193 HOH HOH . E 4 HOH A 171 571 263 HOH HOH . E 4 HOH A 172 572 275 HOH HOH . E 4 HOH A 173 573 265 HOH HOH . E 4 HOH A 174 574 178 HOH HOH . E 4 HOH A 175 575 201 HOH HOH . E 4 HOH A 176 576 258 HOH HOH . E 4 HOH A 177 577 240 HOH HOH . E 4 HOH A 178 578 200 HOH HOH . E 4 HOH A 179 579 80 HOH HOH . E 4 HOH A 180 580 180 HOH HOH . E 4 HOH A 181 581 155 HOH HOH . E 4 HOH A 182 582 212 HOH HOH . E 4 HOH A 183 583 84 HOH HOH . E 4 HOH A 184 584 249 HOH HOH . E 4 HOH A 185 585 183 HOH HOH . E 4 HOH A 186 586 233 HOH HOH . E 4 HOH A 187 587 223 HOH HOH . E 4 HOH A 188 588 18 HOH HOH . E 4 HOH A 189 589 278 HOH HOH . E 4 HOH A 190 590 40 HOH HOH . E 4 HOH A 191 591 57 HOH HOH . E 4 HOH A 192 592 165 HOH HOH . E 4 HOH A 193 593 238 HOH HOH . E 4 HOH A 194 594 253 HOH HOH . E 4 HOH A 195 595 105 HOH HOH . E 4 HOH A 196 596 251 HOH HOH . E 4 HOH A 197 597 159 HOH HOH . E 4 HOH A 198 598 129 HOH HOH . E 4 HOH A 199 599 24 HOH HOH . E 4 HOH A 200 600 44 HOH HOH . E 4 HOH A 201 601 151 HOH HOH . E 4 HOH A 202 602 177 HOH HOH . E 4 HOH A 203 603 290 HOH HOH . E 4 HOH A 204 604 126 HOH HOH . E 4 HOH A 205 605 260 HOH HOH . E 4 HOH A 206 606 209 HOH HOH . E 4 HOH A 207 607 247 HOH HOH . E 4 HOH A 208 608 256 HOH HOH . E 4 HOH A 209 609 163 HOH HOH . E 4 HOH A 210 610 95 HOH HOH . E 4 HOH A 211 611 248 HOH HOH . E 4 HOH A 212 612 245 HOH HOH . E 4 HOH A 213 613 150 HOH HOH . E 4 HOH A 214 614 145 HOH HOH . E 4 HOH A 215 615 175 HOH HOH . E 4 HOH A 216 616 279 HOH HOH . E 4 HOH A 217 617 242 HOH HOH . E 4 HOH A 218 618 195 HOH HOH . E 4 HOH A 219 619 270 HOH HOH . E 4 HOH A 220 620 235 HOH HOH . E 4 HOH A 221 621 197 HOH HOH . E 4 HOH A 222 622 246 HOH HOH . E 4 HOH A 223 623 230 HOH HOH . E 4 HOH A 224 624 274 HOH HOH . E 4 HOH A 225 625 161 HOH HOH . E 4 HOH A 226 626 93 HOH HOH . E 4 HOH A 227 627 292 HOH HOH . E 4 HOH A 228 628 81 HOH HOH . E 4 HOH A 229 629 169 HOH HOH . E 4 HOH A 230 630 119 HOH HOH . E 4 HOH A 231 631 76 HOH HOH . E 4 HOH A 232 632 83 HOH HOH . E 4 HOH A 233 633 170 HOH HOH . E 4 HOH A 234 634 120 HOH HOH . E 4 HOH A 235 635 243 HOH HOH . E 4 HOH A 236 636 158 HOH HOH . E 4 HOH A 237 637 281 HOH HOH . E 4 HOH A 238 638 141 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 -31.375 -20.046 -11.44 1 45.15 ? C1 EDO 301 A 1 HETATM 2 O O1 EDO . . . B 2 -30.243 -19.131 -11.419 1 46.37 ? O1 EDO 301 A 1 HETATM 3 C C2 EDO . . . B 2 -31.484 -20.649 -10.028 1 40.21 ? C2 EDO 301 A 1 HETATM 4 O O2 EDO . . . B 2 -31.523 -19.532 -9.135 1 55.25 ? O2 EDO 301 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #