data_8QUK
#
_model_server_result.job_id            BSvJzh1qmNqN1FhFwlubAw 
_model_server_result.datetime_utc      '2024-10-27 06:33:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8quk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    8QUK 
#
_exptl.entry_id    8QUK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8QUK 
_cell.length_a            90.61 
_cell.length_b            90.61 
_cell.length_c            56.8 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QUK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        168 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 6' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5,6 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 
6 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 14 A CYS 14 1_555 A SG CYS 45 A CYS 45 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
disulf ? disulf2 A SG CYS 198 A CYS 198 1_555 A SG CYS 218 A CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8QUK 
_atom_sites.fract_transf_matrix[1][1]    0.011036 
_atom_sites.fract_transf_matrix[1][2]    0.006372 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012744 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017606 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 301 301 EDO EDO . 
C 2 EDO A 1 302 401 EDO EDO . 
D 3 WVU A 1 303 501 WVU LIG . 
E 4 HOH A 1 401 204 HOH HOH . 
E 4 HOH A 2 402 156 HOH HOH . 
E 4 HOH A 3 403 23 HOH HOH . 
E 4 HOH A 4 404 25 HOH HOH . 
E 4 HOH A 5 405 60 HOH HOH . 
E 4 HOH A 6 406 262 HOH HOH . 
E 4 HOH A 7 407 74 HOH HOH . 
E 4 HOH A 8 408 181 HOH HOH . 
E 4 HOH A 9 409 143 HOH HOH . 
E 4 HOH A 10 410 220 HOH HOH . 
E 4 HOH A 11 411 88 HOH HOH . 
E 4 HOH A 12 412 122 HOH HOH . 
E 4 HOH A 13 413 241 HOH HOH . 
E 4 HOH A 14 414 33 HOH HOH . 
E 4 HOH A 15 415 271 HOH HOH . 
E 4 HOH A 16 416 61 HOH HOH . 
E 4 HOH A 17 417 101 HOH HOH . 
E 4 HOH A 18 418 211 HOH HOH . 
E 4 HOH A 19 419 139 HOH HOH . 
E 4 HOH A 20 420 56 HOH HOH . 
E 4 HOH A 21 421 108 HOH HOH . 
E 4 HOH A 22 422 109 HOH HOH . 
E 4 HOH A 23 423 86 HOH HOH . 
E 4 HOH A 24 424 221 HOH HOH . 
E 4 HOH A 25 425 228 HOH HOH . 
E 4 HOH A 26 426 189 HOH HOH . 
E 4 HOH A 27 427 94 HOH HOH . 
E 4 HOH A 28 428 51 HOH HOH . 
E 4 HOH A 29 429 173 HOH HOH . 
E 4 HOH A 30 430 135 HOH HOH . 
E 4 HOH A 31 431 85 HOH HOH . 
E 4 HOH A 32 432 3 HOH HOH . 
E 4 HOH A 33 433 226 HOH HOH . 
E 4 HOH A 34 434 50 HOH HOH . 
E 4 HOH A 35 435 114 HOH HOH . 
E 4 HOH A 36 436 113 HOH HOH . 
E 4 HOH A 37 437 62 HOH HOH . 
E 4 HOH A 38 438 147 HOH HOH . 
E 4 HOH A 39 439 35 HOH HOH . 
E 4 HOH A 40 440 47 HOH HOH . 
E 4 HOH A 41 441 78 HOH HOH . 
E 4 HOH A 42 442 38 HOH HOH . 
E 4 HOH A 43 443 91 HOH HOH . 
E 4 HOH A 44 444 41 HOH HOH . 
E 4 HOH A 45 445 100 HOH HOH . 
E 4 HOH A 46 446 16 HOH HOH . 
E 4 HOH A 47 447 116 HOH HOH . 
E 4 HOH A 48 448 30 HOH HOH . 
E 4 HOH A 49 449 293 HOH HOH . 
E 4 HOH A 50 450 5 HOH HOH . 
E 4 HOH A 51 451 203 HOH HOH . 
E 4 HOH A 52 452 58 HOH HOH . 
E 4 HOH A 53 453 55 HOH HOH . 
E 4 HOH A 54 454 264 HOH HOH . 
E 4 HOH A 55 455 22 HOH HOH . 
E 4 HOH A 56 456 104 HOH HOH . 
E 4 HOH A 57 457 53 HOH HOH . 
E 4 HOH A 58 458 107 HOH HOH . 
E 4 HOH A 59 459 72 HOH HOH . 
E 4 HOH A 60 460 49 HOH HOH . 
E 4 HOH A 61 461 98 HOH HOH . 
E 4 HOH A 62 462 288 HOH HOH . 
E 4 HOH A 63 463 259 HOH HOH . 
E 4 HOH A 64 464 4 HOH HOH . 
E 4 HOH A 65 465 52 HOH HOH . 
E 4 HOH A 66 466 206 HOH HOH . 
E 4 HOH A 67 467 133 HOH HOH . 
E 4 HOH A 68 468 67 HOH HOH . 
E 4 HOH A 69 469 106 HOH HOH . 
E 4 HOH A 70 470 164 HOH HOH . 
E 4 HOH A 71 471 144 HOH HOH . 
E 4 HOH A 72 472 45 HOH HOH . 
E 4 HOH A 73 473 14 HOH HOH . 
E 4 HOH A 74 474 26 HOH HOH . 
E 4 HOH A 75 475 1 HOH HOH . 
E 4 HOH A 76 476 231 HOH HOH . 
E 4 HOH A 77 477 125 HOH HOH . 
E 4 HOH A 78 478 48 HOH HOH . 
E 4 HOH A 79 479 82 HOH HOH . 
E 4 HOH A 80 480 68 HOH HOH . 
E 4 HOH A 81 481 64 HOH HOH . 
E 4 HOH A 82 482 73 HOH HOH . 
E 4 HOH A 83 483 217 HOH HOH . 
E 4 HOH A 84 484 37 HOH HOH . 
E 4 HOH A 85 485 11 HOH HOH . 
E 4 HOH A 86 486 87 HOH HOH . 
E 4 HOH A 87 487 174 HOH HOH . 
E 4 HOH A 88 488 79 HOH HOH . 
E 4 HOH A 89 489 17 HOH HOH . 
E 4 HOH A 90 490 97 HOH HOH . 
E 4 HOH A 91 491 123 HOH HOH . 
E 4 HOH A 92 492 54 HOH HOH . 
E 4 HOH A 93 493 99 HOH HOH . 
E 4 HOH A 94 494 15 HOH HOH . 
E 4 HOH A 95 495 31 HOH HOH . 
E 4 HOH A 96 496 9 HOH HOH . 
E 4 HOH A 97 497 160 HOH HOH . 
E 4 HOH A 98 498 140 HOH HOH . 
E 4 HOH A 99 499 117 HOH HOH . 
E 4 HOH A 100 500 285 HOH HOH . 
E 4 HOH A 101 501 96 HOH HOH . 
E 4 HOH A 102 502 146 HOH HOH . 
E 4 HOH A 103 503 20 HOH HOH . 
E 4 HOH A 104 504 192 HOH HOH . 
E 4 HOH A 105 505 71 HOH HOH . 
E 4 HOH A 106 506 12 HOH HOH . 
E 4 HOH A 107 507 149 HOH HOH . 
E 4 HOH A 108 508 6 HOH HOH . 
E 4 HOH A 109 509 102 HOH HOH . 
E 4 HOH A 110 510 10 HOH HOH . 
E 4 HOH A 111 511 39 HOH HOH . 
E 4 HOH A 112 512 131 HOH HOH . 
E 4 HOH A 113 513 130 HOH HOH . 
E 4 HOH A 114 514 75 HOH HOH . 
E 4 HOH A 115 515 2 HOH HOH . 
E 4 HOH A 116 516 42 HOH HOH . 
E 4 HOH A 117 517 214 HOH HOH . 
E 4 HOH A 118 518 21 HOH HOH . 
E 4 HOH A 119 519 152 HOH HOH . 
E 4 HOH A 120 520 34 HOH HOH . 
E 4 HOH A 121 521 190 HOH HOH . 
E 4 HOH A 122 522 46 HOH HOH . 
E 4 HOH A 123 523 27 HOH HOH . 
E 4 HOH A 124 524 136 HOH HOH . 
E 4 HOH A 125 525 188 HOH HOH . 
E 4 HOH A 126 526 7 HOH HOH . 
E 4 HOH A 127 527 66 HOH HOH . 
E 4 HOH A 128 528 205 HOH HOH . 
E 4 HOH A 129 529 254 HOH HOH . 
E 4 HOH A 130 530 268 HOH HOH . 
E 4 HOH A 131 531 162 HOH HOH . 
E 4 HOH A 132 532 222 HOH HOH . 
E 4 HOH A 133 533 29 HOH HOH . 
E 4 HOH A 134 534 110 HOH HOH . 
E 4 HOH A 135 535 167 HOH HOH . 
E 4 HOH A 136 536 89 HOH HOH . 
E 4 HOH A 137 537 103 HOH HOH . 
E 4 HOH A 138 538 142 HOH HOH . 
E 4 HOH A 139 539 63 HOH HOH . 
E 4 HOH A 140 540 28 HOH HOH . 
E 4 HOH A 141 541 36 HOH HOH . 
E 4 HOH A 142 542 186 HOH HOH . 
E 4 HOH A 143 543 77 HOH HOH . 
E 4 HOH A 144 544 13 HOH HOH . 
E 4 HOH A 145 545 134 HOH HOH . 
E 4 HOH A 146 546 32 HOH HOH . 
E 4 HOH A 147 547 121 HOH HOH . 
E 4 HOH A 148 548 8 HOH HOH . 
E 4 HOH A 149 549 92 HOH HOH . 
E 4 HOH A 150 550 194 HOH HOH . 
E 4 HOH A 151 551 43 HOH HOH . 
E 4 HOH A 152 552 137 HOH HOH . 
E 4 HOH A 153 553 69 HOH HOH . 
E 4 HOH A 154 554 196 HOH HOH . 
E 4 HOH A 155 555 272 HOH HOH . 
E 4 HOH A 156 556 172 HOH HOH . 
E 4 HOH A 157 557 59 HOH HOH . 
E 4 HOH A 158 558 19 HOH HOH . 
E 4 HOH A 159 559 138 HOH HOH . 
E 4 HOH A 160 560 210 HOH HOH . 
E 4 HOH A 161 561 185 HOH HOH . 
E 4 HOH A 162 562 269 HOH HOH . 
E 4 HOH A 163 563 184 HOH HOH . 
E 4 HOH A 164 564 198 HOH HOH . 
E 4 HOH A 165 565 244 HOH HOH . 
E 4 HOH A 166 566 284 HOH HOH . 
E 4 HOH A 167 567 289 HOH HOH . 
E 4 HOH A 168 568 115 HOH HOH . 
E 4 HOH A 169 569 112 HOH HOH . 
E 4 HOH A 170 570 193 HOH HOH . 
E 4 HOH A 171 571 263 HOH HOH . 
E 4 HOH A 172 572 275 HOH HOH . 
E 4 HOH A 173 573 265 HOH HOH . 
E 4 HOH A 174 574 178 HOH HOH . 
E 4 HOH A 175 575 201 HOH HOH . 
E 4 HOH A 176 576 258 HOH HOH . 
E 4 HOH A 177 577 240 HOH HOH . 
E 4 HOH A 178 578 200 HOH HOH . 
E 4 HOH A 179 579 80 HOH HOH . 
E 4 HOH A 180 580 180 HOH HOH . 
E 4 HOH A 181 581 155 HOH HOH . 
E 4 HOH A 182 582 212 HOH HOH . 
E 4 HOH A 183 583 84 HOH HOH . 
E 4 HOH A 184 584 249 HOH HOH . 
E 4 HOH A 185 585 183 HOH HOH . 
E 4 HOH A 186 586 233 HOH HOH . 
E 4 HOH A 187 587 223 HOH HOH . 
E 4 HOH A 188 588 18 HOH HOH . 
E 4 HOH A 189 589 278 HOH HOH . 
E 4 HOH A 190 590 40 HOH HOH . 
E 4 HOH A 191 591 57 HOH HOH . 
E 4 HOH A 192 592 165 HOH HOH . 
E 4 HOH A 193 593 238 HOH HOH . 
E 4 HOH A 194 594 253 HOH HOH . 
E 4 HOH A 195 595 105 HOH HOH . 
E 4 HOH A 196 596 251 HOH HOH . 
E 4 HOH A 197 597 159 HOH HOH . 
E 4 HOH A 198 598 129 HOH HOH . 
E 4 HOH A 199 599 24 HOH HOH . 
E 4 HOH A 200 600 44 HOH HOH . 
E 4 HOH A 201 601 151 HOH HOH . 
E 4 HOH A 202 602 177 HOH HOH . 
E 4 HOH A 203 603 290 HOH HOH . 
E 4 HOH A 204 604 126 HOH HOH . 
E 4 HOH A 205 605 260 HOH HOH . 
E 4 HOH A 206 606 209 HOH HOH . 
E 4 HOH A 207 607 247 HOH HOH . 
E 4 HOH A 208 608 256 HOH HOH . 
E 4 HOH A 209 609 163 HOH HOH . 
E 4 HOH A 210 610 95 HOH HOH . 
E 4 HOH A 211 611 248 HOH HOH . 
E 4 HOH A 212 612 245 HOH HOH . 
E 4 HOH A 213 613 150 HOH HOH . 
E 4 HOH A 214 614 145 HOH HOH . 
E 4 HOH A 215 615 175 HOH HOH . 
E 4 HOH A 216 616 279 HOH HOH . 
E 4 HOH A 217 617 242 HOH HOH . 
E 4 HOH A 218 618 195 HOH HOH . 
E 4 HOH A 219 619 270 HOH HOH . 
E 4 HOH A 220 620 235 HOH HOH . 
E 4 HOH A 221 621 197 HOH HOH . 
E 4 HOH A 222 622 246 HOH HOH . 
E 4 HOH A 223 623 230 HOH HOH . 
E 4 HOH A 224 624 274 HOH HOH . 
E 4 HOH A 225 625 161 HOH HOH . 
E 4 HOH A 226 626 93 HOH HOH . 
E 4 HOH A 227 627 292 HOH HOH . 
E 4 HOH A 228 628 81 HOH HOH . 
E 4 HOH A 229 629 169 HOH HOH . 
E 4 HOH A 230 630 119 HOH HOH . 
E 4 HOH A 231 631 76 HOH HOH . 
E 4 HOH A 232 632 83 HOH HOH . 
E 4 HOH A 233 633 170 HOH HOH . 
E 4 HOH A 234 634 120 HOH HOH . 
E 4 HOH A 235 635 243 HOH HOH . 
E 4 HOH A 236 636 158 HOH HOH . 
E 4 HOH A 237 637 281 HOH HOH . 
E 4 HOH A 238 638 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 2 -26.629 -21.295 -20.364 1 46.24 ? C1 EDO 302 A 1 
HETATM 2 O O1 EDO . . . C 2 -26.437 -22.507 -21.088 1 44.96 ? O1 EDO 302 A 1 
HETATM 3 C C2 EDO . . . C 2 -28.061 -20.792 -20.373 1 44.2 ? C2 EDO 302 A 1 
HETATM 4 O O2 EDO . . . C 2 -28.984 -21.471 -21.234 1 54.2 ? O2 EDO 302 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#