data_8QUY # _model_server_result.job_id 3rou8Un3LaTV1ATr8ERfjw _model_server_result.datetime_utc '2024-10-27 06:20:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8quy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8QUY # _exptl.entry_id 8QUY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 266.295 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(4-methylphenyl)methyl]-1~{H}-quinoxaline-2,3-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8QUY _cell.length_a 90.76 _cell.length_b 90.76 _cell.length_c 57 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QUY _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 6 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 14 1_555 A SG CYS 45 A CYS 45 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? disulf ? disulf2 A SG CYS 198 A CYS 198 1_555 A SG CYS 218 A CYS 218 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.161 ? # _chem_comp.formula 'C16 H14 N2 O2' _chem_comp.formula_weight 266.295 _chem_comp.id X0L _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(4-methylphenyl)methyl]-1~{H}-quinoxaline-2,3-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O11 C10 X0L doub 385 n n C08 C05 X0L sing 386 n n C08 N09 X0L sing 387 n n C10 N09 X0L sing 388 n n C10 C12 X0L sing 389 n n O13 C12 X0L doub 390 n n C05 C04 X0L doub 391 n y C05 C06 X0L sing 392 n y N09 C20 X0L sing 393 n n C04 C03 X0L sing 394 n y C12 N14 X0L sing 395 n n C06 C07 X0L doub 396 n y C03 C02 X0L doub 397 n y C07 C02 X0L sing 398 n y C02 C01 X0L sing 399 n n C20 C19 X0L doub 400 n y C20 C15 X0L sing 401 n y N14 C15 X0L sing 402 n n C19 C18 X0L sing 403 n y C15 C16 X0L doub 404 n y C18 C17 X0L doub 405 n y C16 C17 X0L sing 406 n y C17 H1 X0L sing 407 n n C01 H2 X0L sing 408 n n C01 H3 X0L sing 409 n n C01 H4 X0L sing 410 n n C03 H5 X0L sing 411 n n C04 H6 X0L sing 412 n n C06 H7 X0L sing 413 n n C07 H8 X0L sing 414 n n C08 H9 X0L sing 415 n n C08 H10 X0L sing 416 n n N14 H11 X0L sing 417 n n C16 H12 X0L sing 418 n n C18 H13 X0L sing 419 n n C19 H14 X0L sing 420 n n # _atom_sites.entry_id 8QUY _atom_sites.fract_transf_matrix[1][1] 0.011018 _atom_sites.fract_transf_matrix[1][2] 0.006361 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 X0L A 1 301 1 X0L LIG . C 3 EDO A 1 302 1 EDO EDO . D 4 HOH A 1 401 97 HOH HOH . D 4 HOH A 2 402 88 HOH HOH . D 4 HOH A 3 403 89 HOH HOH . D 4 HOH A 4 404 90 HOH HOH . D 4 HOH A 5 405 158 HOH HOH . D 4 HOH A 6 406 35 HOH HOH . D 4 HOH A 7 407 121 HOH HOH . D 4 HOH A 8 408 61 HOH HOH . D 4 HOH A 9 409 77 HOH HOH . D 4 HOH A 10 410 183 HOH HOH . D 4 HOH A 11 411 171 HOH HOH . D 4 HOH A 12 412 146 HOH HOH . D 4 HOH A 13 413 115 HOH HOH . D 4 HOH A 14 414 166 HOH HOH . D 4 HOH A 15 415 33 HOH HOH . D 4 HOH A 16 416 52 HOH HOH . D 4 HOH A 17 417 132 HOH HOH . D 4 HOH A 18 418 176 HOH HOH . D 4 HOH A 19 419 111 HOH HOH . D 4 HOH A 20 420 55 HOH HOH . D 4 HOH A 21 421 72 HOH HOH . D 4 HOH A 22 422 43 HOH HOH . D 4 HOH A 23 423 54 HOH HOH . D 4 HOH A 24 424 145 HOH HOH . D 4 HOH A 25 425 84 HOH HOH . D 4 HOH A 26 426 69 HOH HOH . D 4 HOH A 27 427 27 HOH HOH . D 4 HOH A 28 428 42 HOH HOH . D 4 HOH A 29 429 64 HOH HOH . D 4 HOH A 30 430 34 HOH HOH . D 4 HOH A 31 431 10 HOH HOH . D 4 HOH A 32 432 106 HOH HOH . D 4 HOH A 33 433 7 HOH HOH . D 4 HOH A 34 434 57 HOH HOH . D 4 HOH A 35 435 147 HOH HOH . D 4 HOH A 36 436 150 HOH HOH . D 4 HOH A 37 437 148 HOH HOH . D 4 HOH A 38 438 117 HOH HOH . D 4 HOH A 39 439 100 HOH HOH . D 4 HOH A 40 440 41 HOH HOH . D 4 HOH A 41 441 113 HOH HOH . D 4 HOH A 42 442 122 HOH HOH . D 4 HOH A 43 443 141 HOH HOH . D 4 HOH A 44 444 188 HOH HOH . D 4 HOH A 45 445 8 HOH HOH . D 4 HOH A 46 446 2 HOH HOH . D 4 HOH A 47 447 25 HOH HOH . D 4 HOH A 48 448 108 HOH HOH . D 4 HOH A 49 449 37 HOH HOH . D 4 HOH A 50 450 119 HOH HOH . D 4 HOH A 51 451 179 HOH HOH . D 4 HOH A 52 452 62 HOH HOH . D 4 HOH A 53 453 5 HOH HOH . D 4 HOH A 54 454 80 HOH HOH . D 4 HOH A 55 455 105 HOH HOH . D 4 HOH A 56 456 138 HOH HOH . D 4 HOH A 57 457 172 HOH HOH . D 4 HOH A 58 458 135 HOH HOH . D 4 HOH A 59 459 38 HOH HOH . D 4 HOH A 60 460 4 HOH HOH . D 4 HOH A 61 461 56 HOH HOH . D 4 HOH A 62 462 46 HOH HOH . D 4 HOH A 63 463 47 HOH HOH . D 4 HOH A 64 464 91 HOH HOH . D 4 HOH A 65 465 128 HOH HOH . D 4 HOH A 66 466 178 HOH HOH . D 4 HOH A 67 467 120 HOH HOH . D 4 HOH A 68 468 22 HOH HOH . D 4 HOH A 69 469 85 HOH HOH . D 4 HOH A 70 470 201 HOH HOH . D 4 HOH A 71 471 68 HOH HOH . D 4 HOH A 72 472 24 HOH HOH . D 4 HOH A 73 473 197 HOH HOH . D 4 HOH A 74 474 124 HOH HOH . D 4 HOH A 75 475 63 HOH HOH . D 4 HOH A 76 476 134 HOH HOH . D 4 HOH A 77 477 139 HOH HOH . D 4 HOH A 78 478 18 HOH HOH . D 4 HOH A 79 479 48 HOH HOH . D 4 HOH A 80 480 26 HOH HOH . D 4 HOH A 81 481 20 HOH HOH . D 4 HOH A 82 482 114 HOH HOH . D 4 HOH A 83 483 44 HOH HOH . D 4 HOH A 84 484 16 HOH HOH . D 4 HOH A 85 485 21 HOH HOH . D 4 HOH A 86 486 13 HOH HOH . D 4 HOH A 87 487 51 HOH HOH . D 4 HOH A 88 488 192 HOH HOH . D 4 HOH A 89 489 30 HOH HOH . D 4 HOH A 90 490 167 HOH HOH . D 4 HOH A 91 491 9 HOH HOH . D 4 HOH A 92 492 14 HOH HOH . D 4 HOH A 93 493 1 HOH HOH . D 4 HOH A 94 494 125 HOH HOH . D 4 HOH A 95 495 160 HOH HOH . D 4 HOH A 96 496 94 HOH HOH . D 4 HOH A 97 497 31 HOH HOH . D 4 HOH A 98 498 103 HOH HOH . D 4 HOH A 99 499 101 HOH HOH . D 4 HOH A 100 500 58 HOH HOH . D 4 HOH A 101 501 49 HOH HOH . D 4 HOH A 102 502 195 HOH HOH . D 4 HOH A 103 503 53 HOH HOH . D 4 HOH A 104 504 116 HOH HOH . D 4 HOH A 105 505 164 HOH HOH . D 4 HOH A 106 506 23 HOH HOH . D 4 HOH A 107 507 45 HOH HOH . D 4 HOH A 108 508 19 HOH HOH . D 4 HOH A 109 509 161 HOH HOH . D 4 HOH A 110 510 67 HOH HOH . D 4 HOH A 111 511 73 HOH HOH . D 4 HOH A 112 512 109 HOH HOH . D 4 HOH A 113 513 12 HOH HOH . D 4 HOH A 114 514 110 HOH HOH . D 4 HOH A 115 515 79 HOH HOH . D 4 HOH A 116 516 78 HOH HOH . D 4 HOH A 117 517 3 HOH HOH . D 4 HOH A 118 518 136 HOH HOH . D 4 HOH A 119 519 169 HOH HOH . D 4 HOH A 120 520 59 HOH HOH . D 4 HOH A 121 521 65 HOH HOH . D 4 HOH A 122 522 40 HOH HOH . D 4 HOH A 123 523 186 HOH HOH . D 4 HOH A 124 524 32 HOH HOH . D 4 HOH A 125 525 144 HOH HOH . D 4 HOH A 126 526 83 HOH HOH . D 4 HOH A 127 527 131 HOH HOH . D 4 HOH A 128 528 199 HOH HOH . D 4 HOH A 129 529 143 HOH HOH . D 4 HOH A 130 530 17 HOH HOH . D 4 HOH A 131 531 129 HOH HOH . D 4 HOH A 132 532 15 HOH HOH . D 4 HOH A 133 533 81 HOH HOH . D 4 HOH A 134 534 75 HOH HOH . D 4 HOH A 135 535 137 HOH HOH . D 4 HOH A 136 536 157 HOH HOH . D 4 HOH A 137 537 194 HOH HOH . D 4 HOH A 138 538 28 HOH HOH . D 4 HOH A 139 539 50 HOH HOH . D 4 HOH A 140 540 11 HOH HOH . D 4 HOH A 141 541 153 HOH HOH . D 4 HOH A 142 542 174 HOH HOH . D 4 HOH A 143 543 149 HOH HOH . D 4 HOH A 144 544 152 HOH HOH . D 4 HOH A 145 545 190 HOH HOH . D 4 HOH A 146 546 156 HOH HOH . D 4 HOH A 147 547 87 HOH HOH . D 4 HOH A 148 548 193 HOH HOH . D 4 HOH A 149 549 185 HOH HOH . D 4 HOH A 150 550 39 HOH HOH . D 4 HOH A 151 551 159 HOH HOH . D 4 HOH A 152 552 184 HOH HOH . D 4 HOH A 153 553 198 HOH HOH . D 4 HOH A 154 554 133 HOH HOH . D 4 HOH A 155 555 196 HOH HOH . D 4 HOH A 156 556 165 HOH HOH . D 4 HOH A 157 557 182 HOH HOH . D 4 HOH A 158 558 92 HOH HOH . D 4 HOH A 159 559 6 HOH HOH . D 4 HOH A 160 560 60 HOH HOH . D 4 HOH A 161 561 66 HOH HOH . D 4 HOH A 162 562 126 HOH HOH . D 4 HOH A 163 563 70 HOH HOH . D 4 HOH A 164 564 99 HOH HOH . D 4 HOH A 165 565 142 HOH HOH . D 4 HOH A 166 566 202 HOH HOH . D 4 HOH A 167 567 200 HOH HOH . D 4 HOH A 168 568 177 HOH HOH . D 4 HOH A 169 569 104 HOH HOH . D 4 HOH A 170 570 29 HOH HOH . D 4 HOH A 171 571 154 HOH HOH . D 4 HOH A 172 572 96 HOH HOH . D 4 HOH A 173 573 163 HOH HOH . D 4 HOH A 174 574 191 HOH HOH . D 4 HOH A 175 575 181 HOH HOH . D 4 HOH A 176 576 168 HOH HOH . D 4 HOH A 177 577 175 HOH HOH . D 4 HOH A 178 578 93 HOH HOH . D 4 HOH A 179 579 187 HOH HOH . D 4 HOH A 180 580 36 HOH HOH . D 4 HOH A 181 581 112 HOH HOH . D 4 HOH A 182 582 76 HOH HOH . D 4 HOH A 183 583 98 HOH HOH . D 4 HOH A 184 584 170 HOH HOH . D 4 HOH A 185 585 118 HOH HOH . D 4 HOH A 186 586 173 HOH HOH . D 4 HOH A 187 587 107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 X0L . . . B 2 -17.052 -24.463 -3.756 1 49.34 ? C10 X0L 301 A 1 HETATM 2 C C15 X0L . . . B 2 -17.349 -22.942 -1.31 1 49.55 ? C15 X0L 301 A 1 HETATM 3 C C17 X0L . . . B 2 -18.649 -21.853 0.517 1 42.29 ? C17 X0L 301 A 1 HETATM 4 C C20 X0L . . . B 2 -18.508 -23.283 -1.993 1 49.94 ? C20 X0L 301 A 1 HETATM 5 C C01 X0L . . . B 2 -22.165 -29.021 -1.442 1 43.71 ? C01 X0L 301 A 1 HETATM 6 C C02 X0L . . . B 2 -21.514 -27.788 -2.09 1 48.24 ? C02 X0L 301 A 1 HETATM 7 C C03 X0L . . . B 2 -22.273 -26.647 -2.447 1 44.91 ? C03 X0L 301 A 1 HETATM 8 C C04 X0L . . . B 2 -21.69 -25.543 -3.065 1 47.67 ? C04 X0L 301 A 1 HETATM 9 C C05 X0L . . . B 2 -20.312 -25.548 -3.298 1 47.63 ? C05 X0L 301 A 1 HETATM 10 C C06 X0L . . . B 2 -19.56 -26.684 -2.951 1 50.85 ? C06 X0L 301 A 1 HETATM 11 C C07 X0L . . . B 2 -20.148 -27.794 -2.352 1 50.38 ? C07 X0L 301 A 1 HETATM 12 C C08 X0L . . . B 2 -19.629 -24.365 -4.002 1 49.57 ? C08 X0L 301 A 1 HETATM 13 N N09 X0L . . . B 2 -18.376 -24.045 -3.268 1 54.88 ? N09 X0L 301 A 1 HETATM 14 O O11 X0L . . . B 2 -16.907 -25.073 -4.765 1 58.76 ? O11 X0L 301 A 1 HETATM 15 C C12 X0L . . . B 2 -15.792 -24.123 -3.022 1 52.64 ? C12 X0L 301 A 1 HETATM 16 O O13 X0L . . . B 2 -14.661 -24.44 -3.445 1 37.25 ? O13 X0L 301 A 1 HETATM 17 N N14 X0L . . . B 2 -16.037 -23.401 -1.803 1 44.18 ? N14 X0L 301 A 1 HETATM 18 C C16 X0L . . . B 2 -17.438 -22.231 -0.097 1 51.57 ? C16 X0L 301 A 1 HETATM 19 C C18 X0L . . . B 2 -19.791 -22.148 -0.245 1 47.72 ? C18 X0L 301 A 1 HETATM 20 C C19 X0L . . . B 2 -19.723 -22.833 -1.453 1 44.9 ? C19 X0L 301 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 390 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 20 #