data_8QV2
#
_model_server_result.job_id            GMfs1SUfMXatz5VDcuowVQ 
_model_server_result.datetime_utc      '2024-10-10 01:20:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qv2 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"SC","auth_seq_id":501}' 
#
_entry.id    8QV2 
#
_exptl.entry_id    8QV2 
_exptl.method      'ELECTRON MICROSCOPY' 
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_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    13 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8QV2 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 8QV2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    90-meric 
_pdbx_struct_assembly.oligomeric_count      90 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC,YC,ZC,AD,BD,CD,DD,ED,FD,GD 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 8 MC N N 
? 8 NC N N 
? 8 OC N N 
? 8 PC N N 
? 8 QC N N 
? 8 RC N N 
? 8 SC N N 
? 8 TC N N 
? 8 UC N N 
? 8 VC N N 
? 8 WC N N 
? 8 XC N N 
? 8 YC N N 
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_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 174 n n 
PG O2G GTP sing 175 n n 
PG O3G GTP sing 176 n n 
PG O3B GTP sing 177 n n 
O2G HOG2 GTP sing 178 n n 
O3G HOG3 GTP sing 179 n n 
O3B PB GTP sing 180 n n 
PB O1B GTP doub 181 n n 
PB O2B GTP sing 182 n n 
PB O3A GTP sing 183 n n 
O2B HOB2 GTP sing 184 n n 
O3A PA GTP sing 185 n n 
PA O1A GTP doub 186 n n 
PA O2A GTP sing 187 n n 
PA O5' GTP sing 188 n n 
O2A HOA2 GTP sing 189 n n 
O5' C5' GTP sing 190 n n 
C5' C4' GTP sing 191 n n 
C5' H5' GTP sing 192 n n 
C5' "H5''" GTP sing 193 n n 
C4' O4' GTP sing 194 n n 
C4' C3' GTP sing 195 n n 
C4' H4' GTP sing 196 n n 
O4' C1' GTP sing 197 n n 
C3' O3' GTP sing 198 n n 
C3' C2' GTP sing 199 n n 
C3' H3' GTP sing 200 n n 
O3' HO3' GTP sing 201 n n 
C2' O2' GTP sing 202 n n 
C2' C1' GTP sing 203 n n 
C2' H2' GTP sing 204 n n 
O2' HO2' GTP sing 205 n n 
C1' N9 GTP sing 206 n n 
C1' H1' GTP sing 207 n n 
N9 C8 GTP sing 208 n y 
N9 C4 GTP sing 209 n y 
C8 N7 GTP doub 210 n y 
C8 H8 GTP sing 211 n n 
N7 C5 GTP sing 212 n y 
C5 C6 GTP sing 213 n n 
C5 C4 GTP doub 214 n y 
C6 O6 GTP doub 215 n n 
C6 N1 GTP sing 216 n n 
N1 C2 GTP sing 217 n n 
N1 HN1 GTP sing 218 n n 
C2 N2 GTP sing 219 n n 
C2 N3 GTP doub 220 n n 
N2 HN21 GTP sing 221 n n 
N2 HN22 GTP sing 222 n n 
N3 C4 GTP sing 223 n n 
#
_atom_sites.entry_id                     8QV2 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
MC 8 GTP b 1 501 501 GTP GTP . 
NC 8 GTP c 1 501 501 GTP GTP . 
OC 8 GTP d 1 501 501 GTP GTP . 
PC 8 GTP e 1 501 501 GTP GTP . 
QC 8 GTP f 1 501 501 GTP GTP . 
RC 8 GTP g 1 501 501 GTP GTP . 
SC 8 GTP h 1 501 501 GTP GTP . 
TC 8 GTP i 1 501 501 GTP GTP . 
UC 8 GTP j 1 501 501 GTP GTP . 
VC 8 GTP k 1 501 501 GTP GTP . 
WC 8 GTP l 1 501 501 GTP GTP . 
XC 8 GTP m 1 501 501 GTP GTP . 
YC 8 GTP n 1 501 501 GTP GTP . 
ZC 9 GDP a 1 501 501 GDP GDP . 
AD 10 HOH Ue 1 801 803 HOH HOH . 
BD 10 HOH Ui 1 801 803 HOH HOH . 
CD 10 HOH Um 1 801 803 HOH HOH . 
DD 10 HOH Ua 1 801 803 HOH HOH . 
ED 10 HOH Ug 1 801 803 HOH HOH . 
FD 10 HOH Uk 1 801 803 HOH HOH . 
GD 10 HOH Uc 1 801 803 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . SC 8 379.42 270.528 380.706 1 835.81 ? PG GTP 501 h 1 
HETATM 2 O O1G GTP . . . SC 8 379.203 271.069 379.313 1 835.81 ? O1G GTP 501 h 1 
HETATM 3 O O2G GTP . . . SC 8 378.102 270.094 381.302 1 835.81 ? O2G GTP 501 h 1 
HETATM 4 O O3G GTP . . . SC 8 380.362 269.35 380.649 1 835.81 ? O3G GTP 501 h 1 
HETATM 5 O O3B GTP . . . SC 8 380.067 271.692 381.609 1 835.81 ? O3B GTP 501 h 1 
HETATM 6 P PB GTP . . . SC 8 381.276 272.588 381.037 1 835.81 ? PB GTP 501 h 1 
HETATM 7 O O1B GTP . . . SC 8 381.905 273.364 382.169 1 835.81 ? O1B GTP 501 h 1 
HETATM 8 O O2B GTP . . . SC 8 382.294 271.725 380.333 1 835.81 ? O2B GTP 501 h 1 
HETATM 9 O O3A GTP . . . SC 8 380.56 273.607 380.015 1 835.81 ? O3A GTP 501 h 1 
HETATM 10 P PA GTP . . . SC 8 379.701 274.84 380.597 1 835.81 ? PA GTP 501 h 1 
HETATM 11 O O1A GTP . . . SC 8 378.566 275.159 379.654 1 835.81 ? O1A GTP 501 h 1 
HETATM 12 O O2A GTP . . . SC 8 379.185 274.529 381.981 1 835.81 ? O2A GTP 501 h 1 
HETATM 13 O O5' GTP . . . SC 8 380.742 276.069 380.635 1 835.81 ? O5' GTP 501 h 1 
HETATM 14 C C5' GTP . . . SC 8 380.44 277.302 380.018 1 835.81 ? C5' GTP 501 h 1 
HETATM 15 C C4' GTP . . . SC 8 380.983 277.358 378.597 1 835.81 ? C4' GTP 501 h 1 
HETATM 16 O O4' GTP . . . SC 8 380.265 276.467 377.769 1 835.81 ? O4' GTP 501 h 1 
HETATM 17 C C3' GTP . . . SC 8 380.812 278.742 377.996 1 835.81 ? C3' GTP 501 h 1 
HETATM 18 O O3' GTP . . . SC 8 382.035 279.439 377.999 1 835.81 ? O3' GTP 501 h 1 
HETATM 19 C C2' GTP . . . SC 8 380.35 278.498 376.575 1 835.81 ? C2' GTP 501 h 1 
HETATM 20 O O2' GTP . . . SC 8 381.354 278.867 375.66 1 835.81 ? O2' GTP 501 h 1 
HETATM 21 C C1' GTP . . . SC 8 380.054 277.008 376.478 1 835.81 ? C1' GTP 501 h 1 
HETATM 22 N N9 GTP . . . SC 8 378.646 276.787 376.094 1 835.81 ? N9 GTP 501 h 1 
HETATM 23 C C8 GTP . . . SC 8 377.807 275.872 376.676 1 835.81 ? C8 GTP 501 h 1 
HETATM 24 N N7 GTP . . . SC 8 376.603 275.94 376.068 1 835.81 ? N7 GTP 501 h 1 
HETATM 25 C C5 GTP . . . SC 8 376.66 276.875 375.096 1 835.81 ? C5 GTP 501 h 1 
HETATM 26 C C6 GTP . . . SC 8 375.715 277.33 374.186 1 835.81 ? C6 GTP 501 h 1 
HETATM 27 O O6 GTP . . . SC 8 374.582 276.851 374.184 1 835.81 ? O6 GTP 501 h 1 
HETATM 28 N N1 GTP . . . SC 8 376.051 278.316 373.284 1 835.81 ? N1 GTP 501 h 1 
HETATM 29 C C2 GTP . . . SC 8 377.325 278.845 373.292 1 835.81 ? C2 GTP 501 h 1 
HETATM 30 N N2 GTP . . . SC 8 377.654 279.799 372.424 1 835.81 ? N2 GTP 501 h 1 
HETATM 31 N N3 GTP . . . SC 8 378.26 278.387 374.2 1 835.81 ? N3 GTP 501 h 1 
HETATM 32 C C4 GTP . . . SC 8 377.94 277.416 375.094 1 835.81 ? C4 GTP 501 h 1 
#
_model_server_stats.io_time_ms              85 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    417 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           32 
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