data_8QV4
#
_model_server_result.job_id            lMui6e82bKvAi0LLfTbkHA 
_model_server_result.datetime_utc      '2024-11-25 11:38:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qv4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    8QV4 
#
_exptl.entry_id    8QV4 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8QV4 
_cell.length_a            90.399 
_cell.length_b            90.399 
_cell.length_c            56.654 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QV4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        168 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 6' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5,6 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 
6 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 14 A CYS 14 1_555 A SG CYS 45 A CYS 45 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
disulf ? disulf2 A SG CYS 198 A CYS 198 1_555 A SG CYS 218 A CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8QV4 
_atom_sites.fract_transf_matrix[1][1]    0.011062 
_atom_sites.fract_transf_matrix[1][2]    0.006387 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012773 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017651 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 301 301 EDO EDO . 
C 2 EDO A 1 302 401 EDO EDO . 
D 3 WZX A 1 303 1 WZX LIG . 
E 4 HOH A 1 401 74 HOH HOH . 
E 4 HOH A 2 402 63 HOH HOH . 
E 4 HOH A 3 403 23 HOH HOH . 
E 4 HOH A 4 404 14 HOH HOH . 
E 4 HOH A 5 405 34 HOH HOH . 
E 4 HOH A 6 406 35 HOH HOH . 
E 4 HOH A 7 407 19 HOH HOH . 
E 4 HOH A 8 408 17 HOH HOH . 
E 4 HOH A 9 409 32 HOH HOH . 
E 4 HOH A 10 410 72 HOH HOH . 
E 4 HOH A 11 411 43 HOH HOH . 
E 4 HOH A 12 412 9 HOH HOH . 
E 4 HOH A 13 413 73 HOH HOH . 
E 4 HOH A 14 414 44 HOH HOH . 
E 4 HOH A 15 415 77 HOH HOH . 
E 4 HOH A 16 416 16 HOH HOH . 
E 4 HOH A 17 417 15 HOH HOH . 
E 4 HOH A 18 418 53 HOH HOH . 
E 4 HOH A 19 419 2 HOH HOH . 
E 4 HOH A 20 420 54 HOH HOH . 
E 4 HOH A 21 421 5 HOH HOH . 
E 4 HOH A 22 422 20 HOH HOH . 
E 4 HOH A 23 423 1 HOH HOH . 
E 4 HOH A 24 424 30 HOH HOH . 
E 4 HOH A 25 425 50 HOH HOH . 
E 4 HOH A 26 426 31 HOH HOH . 
E 4 HOH A 27 427 11 HOH HOH . 
E 4 HOH A 28 428 36 HOH HOH . 
E 4 HOH A 29 429 4 HOH HOH . 
E 4 HOH A 30 430 13 HOH HOH . 
E 4 HOH A 31 431 41 HOH HOH . 
E 4 HOH A 32 432 8 HOH HOH . 
E 4 HOH A 33 433 27 HOH HOH . 
E 4 HOH A 34 434 25 HOH HOH . 
E 4 HOH A 35 435 6 HOH HOH . 
E 4 HOH A 36 436 59 HOH HOH . 
E 4 HOH A 37 437 45 HOH HOH . 
E 4 HOH A 38 438 24 HOH HOH . 
E 4 HOH A 39 439 26 HOH HOH . 
E 4 HOH A 40 440 38 HOH HOH . 
E 4 HOH A 41 441 67 HOH HOH . 
E 4 HOH A 42 442 56 HOH HOH . 
E 4 HOH A 43 443 60 HOH HOH . 
E 4 HOH A 44 444 3 HOH HOH . 
E 4 HOH A 45 445 64 HOH HOH . 
E 4 HOH A 46 446 79 HOH HOH . 
E 4 HOH A 47 447 65 HOH HOH . 
E 4 HOH A 48 448 69 HOH HOH . 
E 4 HOH A 49 449 71 HOH HOH . 
E 4 HOH A 50 450 28 HOH HOH . 
E 4 HOH A 51 451 57 HOH HOH . 
E 4 HOH A 52 452 46 HOH HOH . 
E 4 HOH A 53 453 76 HOH HOH . 
E 4 HOH A 54 454 39 HOH HOH . 
E 4 HOH A 55 455 18 HOH HOH . 
E 4 HOH A 56 456 10 HOH HOH . 
E 4 HOH A 57 457 58 HOH HOH . 
E 4 HOH A 58 458 66 HOH HOH . 
E 4 HOH A 59 459 78 HOH HOH . 
E 4 HOH A 60 460 49 HOH HOH . 
E 4 HOH A 61 461 55 HOH HOH . 
E 4 HOH A 62 462 68 HOH HOH . 
E 4 HOH A 63 463 61 HOH HOH . 
E 4 HOH A 64 464 52 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 -31.104 19.076 11.828 1 34.05 ? C1 EDO 301 A 1 
HETATM 2 O O1 EDO . . . B 2 -30.242 18.051 11.326 1 34.17 ? O1 EDO 301 A 1 
HETATM 3 C C2 EDO . . . B 2 -31.081 20.369 11.073 1 31.14 ? C2 EDO 301 A 1 
HETATM 4 O O2 EDO . . . B 2 -31.686 20.306 9.785 1 28.29 ? O2 EDO 301 A 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#