data_8QVL
#
_model_server_result.job_id            2O1YG-AE4XwDx7ljxk0Nsw 
_model_server_result.datetime_utc      '2024-11-28 21:06:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qvl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":603}' 
#
_entry.id    8QVL 
#
_exptl.entry_id    8QVL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8QVL 
_cell.length_a            94.39 
_cell.length_b            94.39 
_cell.length_c            247.45 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QVL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 47.195 -81.744138 -41.241667 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 106 n n 
S C1 DMS sing 107 n n 
S C2 DMS sing 108 n n 
C1 H11 DMS sing 109 n n 
C1 H12 DMS sing 110 n n 
C1 H13 DMS sing 111 n n 
C2 H21 DMS sing 112 n n 
C2 H22 DMS sing 113 n n 
C2 H23 DMS sing 114 n n 
#
_atom_sites.entry_id                     8QVL 
_atom_sites.fract_transf_matrix[1][1]    0.010594 
_atom_sites.fract_transf_matrix[1][2]    0.006117 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012233 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004041 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 4VY A 1 601 601 4VY UNL . 
C 2 4VY A 1 602 602 4VY UNL . 
D 3 DMS A 1 603 603 DMS DMS . 
E 4 PGE A 1 604 604 PGE PGE . 
F 5 HOH A 1 701 15 HOH HOH . 
F 5 HOH A 2 702 88 HOH HOH . 
F 5 HOH A 3 703 87 HOH HOH . 
F 5 HOH A 4 704 13 HOH HOH . 
F 5 HOH A 5 705 68 HOH HOH . 
F 5 HOH A 6 706 133 HOH HOH . 
F 5 HOH A 7 707 38 HOH HOH . 
F 5 HOH A 8 708 103 HOH HOH . 
F 5 HOH A 9 709 49 HOH HOH . 
F 5 HOH A 10 710 28 HOH HOH . 
F 5 HOH A 11 711 3 HOH HOH . 
F 5 HOH A 12 712 35 HOH HOH . 
F 5 HOH A 13 713 14 HOH HOH . 
F 5 HOH A 14 714 19 HOH HOH . 
F 5 HOH A 15 715 12 HOH HOH . 
F 5 HOH A 16 716 125 HOH HOH . 
F 5 HOH A 17 717 18 HOH HOH . 
F 5 HOH A 18 718 9 HOH HOH . 
F 5 HOH A 19 719 70 HOH HOH . 
F 5 HOH A 20 720 93 HOH HOH . 
F 5 HOH A 21 721 85 HOH HOH . 
F 5 HOH A 22 722 156 HOH HOH . 
F 5 HOH A 23 723 37 HOH HOH . 
F 5 HOH A 24 724 143 HOH HOH . 
F 5 HOH A 25 725 20 HOH HOH . 
F 5 HOH A 26 726 140 HOH HOH . 
F 5 HOH A 27 727 79 HOH HOH . 
F 5 HOH A 28 728 159 HOH HOH . 
F 5 HOH A 29 729 127 HOH HOH . 
F 5 HOH A 30 730 139 HOH HOH . 
F 5 HOH A 31 731 117 HOH HOH . 
F 5 HOH A 32 732 66 HOH HOH . 
F 5 HOH A 33 733 71 HOH HOH . 
F 5 HOH A 34 734 97 HOH HOH . 
F 5 HOH A 35 735 77 HOH HOH . 
F 5 HOH A 36 736 24 HOH HOH . 
F 5 HOH A 37 737 40 HOH HOH . 
F 5 HOH A 38 738 74 HOH HOH . 
F 5 HOH A 39 739 36 HOH HOH . 
F 5 HOH A 40 740 48 HOH HOH . 
F 5 HOH A 41 741 4 HOH HOH . 
F 5 HOH A 42 742 78 HOH HOH . 
F 5 HOH A 43 743 10 HOH HOH . 
F 5 HOH A 44 744 46 HOH HOH . 
F 5 HOH A 45 745 29 HOH HOH . 
F 5 HOH A 46 746 2 HOH HOH . 
F 5 HOH A 47 747 43 HOH HOH . 
F 5 HOH A 48 748 33 HOH HOH . 
F 5 HOH A 49 749 96 HOH HOH . 
F 5 HOH A 50 750 52 HOH HOH . 
F 5 HOH A 51 751 8 HOH HOH . 
F 5 HOH A 52 752 108 HOH HOH . 
F 5 HOH A 53 753 16 HOH HOH . 
F 5 HOH A 54 754 132 HOH HOH . 
F 5 HOH A 55 755 60 HOH HOH . 
F 5 HOH A 56 756 130 HOH HOH . 
F 5 HOH A 57 757 56 HOH HOH . 
F 5 HOH A 58 758 6 HOH HOH . 
F 5 HOH A 59 759 1 HOH HOH . 
F 5 HOH A 60 760 89 HOH HOH . 
F 5 HOH A 61 761 30 HOH HOH . 
F 5 HOH A 62 762 69 HOH HOH . 
F 5 HOH A 63 763 111 HOH HOH . 
F 5 HOH A 64 764 22 HOH HOH . 
F 5 HOH A 65 765 135 HOH HOH . 
F 5 HOH A 66 766 137 HOH HOH . 
F 5 HOH A 67 767 128 HOH HOH . 
F 5 HOH A 68 768 100 HOH HOH . 
F 5 HOH A 69 769 31 HOH HOH . 
F 5 HOH A 70 770 116 HOH HOH . 
F 5 HOH A 71 771 149 HOH HOH . 
F 5 HOH A 72 772 81 HOH HOH . 
F 5 HOH A 73 773 138 HOH HOH . 
F 5 HOH A 74 774 83 HOH HOH . 
F 5 HOH A 75 775 84 HOH HOH . 
F 5 HOH A 76 776 44 HOH HOH . 
F 5 HOH A 77 777 131 HOH HOH . 
F 5 HOH A 78 778 124 HOH HOH . 
F 5 HOH A 79 779 142 HOH HOH . 
F 5 HOH A 80 780 21 HOH HOH . 
F 5 HOH A 81 781 27 HOH HOH . 
F 5 HOH A 82 782 26 HOH HOH . 
F 5 HOH A 83 783 113 HOH HOH . 
F 5 HOH A 84 784 105 HOH HOH . 
F 5 HOH A 85 785 41 HOH HOH . 
F 5 HOH A 86 786 7 HOH HOH . 
F 5 HOH A 87 787 50 HOH HOH . 
F 5 HOH A 88 788 145 HOH HOH . 
F 5 HOH A 89 789 67 HOH HOH . 
F 5 HOH A 90 790 119 HOH HOH . 
F 5 HOH A 91 791 104 HOH HOH . 
F 5 HOH A 92 792 154 HOH HOH . 
F 5 HOH A 93 793 5 HOH HOH . 
F 5 HOH A 94 794 92 HOH HOH . 
F 5 HOH A 95 795 53 HOH HOH . 
F 5 HOH A 96 796 17 HOH HOH . 
F 5 HOH A 97 797 99 HOH HOH . 
F 5 HOH A 98 798 61 HOH HOH . 
F 5 HOH A 99 799 54 HOH HOH . 
F 5 HOH A 100 800 94 HOH HOH . 
F 5 HOH A 101 801 109 HOH HOH . 
F 5 HOH A 102 802 11 HOH HOH . 
F 5 HOH A 103 803 90 HOH HOH . 
F 5 HOH A 104 804 121 HOH HOH . 
F 5 HOH A 105 805 82 HOH HOH . 
F 5 HOH A 106 806 23 HOH HOH . 
F 5 HOH A 107 807 57 HOH HOH . 
F 5 HOH A 108 808 120 HOH HOH . 
F 5 HOH A 109 809 75 HOH HOH . 
F 5 HOH A 110 810 107 HOH HOH . 
F 5 HOH A 111 811 80 HOH HOH . 
F 5 HOH A 112 812 134 HOH HOH . 
F 5 HOH A 113 813 42 HOH HOH . 
F 5 HOH A 114 814 147 HOH HOH . 
F 5 HOH A 115 815 101 HOH HOH . 
F 5 HOH A 116 816 25 HOH HOH . 
F 5 HOH A 117 817 45 HOH HOH . 
F 5 HOH A 118 818 122 HOH HOH . 
F 5 HOH A 119 819 51 HOH HOH . 
F 5 HOH A 120 820 114 HOH HOH . 
F 5 HOH A 121 821 151 HOH HOH . 
F 5 HOH A 122 822 63 HOH HOH . 
F 5 HOH A 123 823 123 HOH HOH . 
F 5 HOH A 124 824 95 HOH HOH . 
F 5 HOH A 125 825 91 HOH HOH . 
F 5 HOH A 126 826 59 HOH HOH . 
F 5 HOH A 127 827 102 HOH HOH . 
F 5 HOH A 128 828 64 HOH HOH . 
F 5 HOH A 129 829 110 HOH HOH . 
F 5 HOH A 130 830 106 HOH HOH . 
F 5 HOH A 131 831 47 HOH HOH . 
F 5 HOH A 132 832 155 HOH HOH . 
F 5 HOH A 133 833 62 HOH HOH . 
F 5 HOH A 134 834 98 HOH HOH . 
F 5 HOH A 135 835 34 HOH HOH . 
F 5 HOH A 136 836 86 HOH HOH . 
F 5 HOH A 137 837 118 HOH HOH . 
F 5 HOH A 138 838 126 HOH HOH . 
F 5 HOH A 139 839 157 HOH HOH . 
F 5 HOH A 140 840 32 HOH HOH . 
F 5 HOH A 141 841 58 HOH HOH . 
F 5 HOH A 142 842 115 HOH HOH . 
F 5 HOH A 143 843 141 HOH HOH . 
F 5 HOH A 144 844 73 HOH HOH . 
F 5 HOH A 145 845 55 HOH HOH . 
F 5 HOH A 146 846 146 HOH HOH . 
F 5 HOH A 147 847 76 HOH HOH . 
F 5 HOH A 148 848 112 HOH HOH . 
F 5 HOH A 149 849 72 HOH HOH . 
F 5 HOH A 150 850 153 HOH HOH . 
F 5 HOH A 151 851 152 HOH HOH . 
F 5 HOH A 152 852 150 HOH HOH . 
F 5 HOH A 153 853 39 HOH HOH . 
F 5 HOH A 154 854 148 HOH HOH . 
F 5 HOH A 155 855 158 HOH HOH . 
F 5 HOH A 156 856 144 HOH HOH . 
F 5 HOH A 157 857 129 HOH HOH . 
F 5 HOH A 158 858 65 HOH HOH . 
F 5 HOH A 159 859 136 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 9.537 -11.167 -20.75 1 117.75 ? S DMS 603 A 1 
HETATM 2 O O DMS . . . D 3 10.348 -9.919 -20.963 1 117.72 ? O DMS 603 A 1 
HETATM 3 C C1 DMS . . . D 3 9.348 -12.003 -22.35 1 117.76 ? C1 DMS 603 A 1 
HETATM 4 C C2 DMS . . . D 3 10.556 -12.433 -19.95 1 117.64 ? C2 DMS 603 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#