data_8QVM # _model_server_result.job_id caUF5qDj6wAP5G8TzwHyfw _model_server_result.datetime_utc '2024-10-27 22:33:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qvm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8QVM # _exptl.entry_id 8QVM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8QVM _cell.length_a 94.41 _cell.length_b 94.41 _cell.length_c 247.57 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QVM _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 47.205 -81.761458 -41.261667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 237 n n C1 C2 PGE sing 238 n n C1 H1 PGE sing 239 n n C1 H12 PGE sing 240 n n O1 HO1 PGE sing 241 n n C2 O2 PGE sing 242 n n C2 H2 PGE sing 243 n n C2 H22 PGE sing 244 n n O2 C3 PGE sing 245 n n C3 C4 PGE sing 246 n n C3 H3 PGE sing 247 n n C3 H32 PGE sing 248 n n C4 O3 PGE sing 249 n n C4 H4 PGE sing 250 n n C4 H42 PGE sing 251 n n O4 C6 PGE sing 252 n n O4 HO4 PGE sing 253 n n C6 C5 PGE sing 254 n n C6 H6 PGE sing 255 n n C6 H62 PGE sing 256 n n C5 O3 PGE sing 257 n n C5 H5 PGE sing 258 n n C5 H52 PGE sing 259 n n # _atom_sites.entry_id 8QVM _atom_sites.fract_transf_matrix[1][1] 0.010592 _atom_sites.fract_transf_matrix[1][2] 0.006115 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012231 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004039 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PGE A 1 601 601 PGE PGE . C 3 HOH A 1 701 219 HOH HOH . C 3 HOH A 2 702 193 HOH HOH . C 3 HOH A 3 703 192 HOH HOH . C 3 HOH A 4 704 148 HOH HOH . C 3 HOH A 5 705 200 HOH HOH . C 3 HOH A 6 706 14 HOH HOH . C 3 HOH A 7 707 213 HOH HOH . C 3 HOH A 8 708 195 HOH HOH . C 3 HOH A 9 709 127 HOH HOH . C 3 HOH A 10 710 203 HOH HOH . C 3 HOH A 11 711 246 HOH HOH . C 3 HOH A 12 712 12 HOH HOH . C 3 HOH A 13 713 58 HOH HOH . C 3 HOH A 14 714 232 HOH HOH . C 3 HOH A 15 715 180 HOH HOH . C 3 HOH A 16 716 6 HOH HOH . C 3 HOH A 17 717 13 HOH HOH . C 3 HOH A 18 718 126 HOH HOH . C 3 HOH A 19 719 68 HOH HOH . C 3 HOH A 20 720 10 HOH HOH . C 3 HOH A 21 721 56 HOH HOH . C 3 HOH A 22 722 48 HOH HOH . C 3 HOH A 23 723 114 HOH HOH . C 3 HOH A 24 724 137 HOH HOH . C 3 HOH A 25 725 82 HOH HOH . C 3 HOH A 26 726 226 HOH HOH . C 3 HOH A 27 727 271 HOH HOH . C 3 HOH A 28 728 86 HOH HOH . C 3 HOH A 29 729 135 HOH HOH . C 3 HOH A 30 730 77 HOH HOH . C 3 HOH A 31 731 100 HOH HOH . C 3 HOH A 32 732 53 HOH HOH . C 3 HOH A 33 733 69 HOH HOH . C 3 HOH A 34 734 27 HOH HOH . C 3 HOH A 35 735 79 HOH HOH . C 3 HOH A 36 736 73 HOH HOH . C 3 HOH A 37 737 154 HOH HOH . C 3 HOH A 38 738 172 HOH HOH . C 3 HOH A 39 739 267 HOH HOH . C 3 HOH A 40 740 3 HOH HOH . C 3 HOH A 41 741 22 HOH HOH . C 3 HOH A 42 742 119 HOH HOH . C 3 HOH A 43 743 4 HOH HOH . C 3 HOH A 44 744 164 HOH HOH . C 3 HOH A 45 745 182 HOH HOH . C 3 HOH A 46 746 228 HOH HOH . C 3 HOH A 47 747 71 HOH HOH . C 3 HOH A 48 748 19 HOH HOH . C 3 HOH A 49 749 118 HOH HOH . C 3 HOH A 50 750 291 HOH HOH . C 3 HOH A 51 751 181 HOH HOH . C 3 HOH A 52 752 26 HOH HOH . C 3 HOH A 53 753 239 HOH HOH . C 3 HOH A 54 754 20 HOH HOH . C 3 HOH A 55 755 57 HOH HOH . C 3 HOH A 56 756 207 HOH HOH . C 3 HOH A 57 757 93 HOH HOH . C 3 HOH A 58 758 186 HOH HOH . C 3 HOH A 59 759 70 HOH HOH . C 3 HOH A 60 760 54 HOH HOH . C 3 HOH A 61 761 115 HOH HOH . C 3 HOH A 62 762 161 HOH HOH . C 3 HOH A 63 763 205 HOH HOH . C 3 HOH A 64 764 107 HOH HOH . C 3 HOH A 65 765 258 HOH HOH . C 3 HOH A 66 766 37 HOH HOH . C 3 HOH A 67 767 106 HOH HOH . C 3 HOH A 68 768 103 HOH HOH . C 3 HOH A 69 769 11 HOH HOH . C 3 HOH A 70 770 260 HOH HOH . C 3 HOH A 71 771 8 HOH HOH . C 3 HOH A 72 772 206 HOH HOH . C 3 HOH A 73 773 7 HOH HOH . C 3 HOH A 74 774 24 HOH HOH . C 3 HOH A 75 775 183 HOH HOH . C 3 HOH A 76 776 25 HOH HOH . C 3 HOH A 77 777 255 HOH HOH . C 3 HOH A 78 778 65 HOH HOH . C 3 HOH A 79 779 42 HOH HOH . C 3 HOH A 80 780 231 HOH HOH . C 3 HOH A 81 781 102 HOH HOH . C 3 HOH A 82 782 99 HOH HOH . C 3 HOH A 83 783 152 HOH HOH . C 3 HOH A 84 784 51 HOH HOH . C 3 HOH A 85 785 23 HOH HOH . C 3 HOH A 86 786 18 HOH HOH . C 3 HOH A 87 787 189 HOH HOH . C 3 HOH A 88 788 253 HOH HOH . C 3 HOH A 89 789 88 HOH HOH . C 3 HOH A 90 790 116 HOH HOH . C 3 HOH A 91 791 229 HOH HOH . C 3 HOH A 92 792 136 HOH HOH . C 3 HOH A 93 793 159 HOH HOH . C 3 HOH A 94 794 184 HOH HOH . C 3 HOH A 95 795 166 HOH HOH . C 3 HOH A 96 796 162 HOH HOH . C 3 HOH A 97 797 47 HOH HOH . C 3 HOH A 98 798 155 HOH HOH . C 3 HOH A 99 799 208 HOH HOH . C 3 HOH A 100 800 97 HOH HOH . C 3 HOH A 101 801 174 HOH HOH . C 3 HOH A 102 802 98 HOH HOH . C 3 HOH A 103 803 64 HOH HOH . C 3 HOH A 104 804 282 HOH HOH . C 3 HOH A 105 805 177 HOH HOH . C 3 HOH A 106 806 41 HOH HOH . C 3 HOH A 107 807 74 HOH HOH . C 3 HOH A 108 808 179 HOH HOH . C 3 HOH A 109 809 9 HOH HOH . C 3 HOH A 110 810 163 HOH HOH . C 3 HOH A 111 811 234 HOH HOH . C 3 HOH A 112 812 187 HOH HOH . C 3 HOH A 113 813 160 HOH HOH . C 3 HOH A 114 814 128 HOH HOH . C 3 HOH A 115 815 273 HOH HOH . C 3 HOH A 116 816 29 HOH HOH . C 3 HOH A 117 817 125 HOH HOH . C 3 HOH A 118 818 40 HOH HOH . C 3 HOH A 119 819 194 HOH HOH . C 3 HOH A 120 820 259 HOH HOH . C 3 HOH A 121 821 60 HOH HOH . C 3 HOH A 122 822 33 HOH HOH . C 3 HOH A 123 823 85 HOH HOH . C 3 HOH A 124 824 16 HOH HOH . C 3 HOH A 125 825 176 HOH HOH . C 3 HOH A 126 826 84 HOH HOH . C 3 HOH A 127 827 256 HOH HOH . C 3 HOH A 128 828 67 HOH HOH . C 3 HOH A 129 829 95 HOH HOH . C 3 HOH A 130 830 112 HOH HOH . C 3 HOH A 131 831 61 HOH HOH . C 3 HOH A 132 832 34 HOH HOH . C 3 HOH A 133 833 111 HOH HOH . C 3 HOH A 134 834 113 HOH HOH . C 3 HOH A 135 835 81 HOH HOH . C 3 HOH A 136 836 151 HOH HOH . C 3 HOH A 137 837 149 HOH HOH . C 3 HOH A 138 838 167 HOH HOH . C 3 HOH A 139 839 169 HOH HOH . C 3 HOH A 140 840 87 HOH HOH . C 3 HOH A 141 841 52 HOH HOH . C 3 HOH A 142 842 122 HOH HOH . C 3 HOH A 143 843 230 HOH HOH . C 3 HOH A 144 844 243 HOH HOH . C 3 HOH A 145 845 249 HOH HOH . C 3 HOH A 146 846 201 HOH HOH . C 3 HOH A 147 847 117 HOH HOH . C 3 HOH A 148 848 15 HOH HOH . C 3 HOH A 149 849 233 HOH HOH . C 3 HOH A 150 850 170 HOH HOH . C 3 HOH A 151 851 35 HOH HOH . C 3 HOH A 152 852 62 HOH HOH . C 3 HOH A 153 853 178 HOH HOH . C 3 HOH A 154 854 5 HOH HOH . C 3 HOH A 155 855 46 HOH HOH . C 3 HOH A 156 856 17 HOH HOH . C 3 HOH A 157 857 49 HOH HOH . C 3 HOH A 158 858 94 HOH HOH . C 3 HOH A 159 859 76 HOH HOH . C 3 HOH A 160 860 32 HOH HOH . C 3 HOH A 161 861 2 HOH HOH . C 3 HOH A 162 862 288 HOH HOH . C 3 HOH A 163 863 1 HOH HOH . C 3 HOH A 164 864 145 HOH HOH . C 3 HOH A 165 865 121 HOH HOH . C 3 HOH A 166 866 38 HOH HOH . C 3 HOH A 167 867 134 HOH HOH . C 3 HOH A 168 868 66 HOH HOH . C 3 HOH A 169 869 96 HOH HOH . C 3 HOH A 170 870 293 HOH HOH . C 3 HOH A 171 871 44 HOH HOH . C 3 HOH A 172 872 72 HOH HOH . C 3 HOH A 173 873 204 HOH HOH . C 3 HOH A 174 874 173 HOH HOH . C 3 HOH A 175 875 150 HOH HOH . C 3 HOH A 176 876 132 HOH HOH . C 3 HOH A 177 877 262 HOH HOH . C 3 HOH A 178 878 202 HOH HOH . C 3 HOH A 179 879 296 HOH HOH . C 3 HOH A 180 880 31 HOH HOH . C 3 HOH A 181 881 109 HOH HOH . C 3 HOH A 182 882 157 HOH HOH . C 3 HOH A 183 883 227 HOH HOH . C 3 HOH A 184 884 55 HOH HOH . C 3 HOH A 185 885 185 HOH HOH . C 3 HOH A 186 886 43 HOH HOH . C 3 HOH A 187 887 168 HOH HOH . C 3 HOH A 188 888 223 HOH HOH . C 3 HOH A 189 889 251 HOH HOH . C 3 HOH A 190 890 140 HOH HOH . C 3 HOH A 191 891 196 HOH HOH . C 3 HOH A 192 892 156 HOH HOH . C 3 HOH A 193 893 266 HOH HOH . C 3 HOH A 194 894 89 HOH HOH . C 3 HOH A 195 895 108 HOH HOH . C 3 HOH A 196 896 191 HOH HOH . C 3 HOH A 197 897 283 HOH HOH . C 3 HOH A 198 898 280 HOH HOH . C 3 HOH A 199 899 75 HOH HOH . C 3 HOH A 200 900 175 HOH HOH . C 3 HOH A 201 901 83 HOH HOH . C 3 HOH A 202 902 237 HOH HOH . C 3 HOH A 203 903 241 HOH HOH . C 3 HOH A 204 904 110 HOH HOH . C 3 HOH A 205 905 138 HOH HOH . C 3 HOH A 206 906 30 HOH HOH . C 3 HOH A 207 907 78 HOH HOH . C 3 HOH A 208 908 171 HOH HOH . C 3 HOH A 209 909 28 HOH HOH . C 3 HOH A 210 910 39 HOH HOH . C 3 HOH A 211 911 142 HOH HOH . C 3 HOH A 212 912 264 HOH HOH . C 3 HOH A 213 913 244 HOH HOH . C 3 HOH A 214 914 212 HOH HOH . C 3 HOH A 215 915 215 HOH HOH . C 3 HOH A 216 916 284 HOH HOH . C 3 HOH A 217 917 144 HOH HOH . C 3 HOH A 218 918 216 HOH HOH . C 3 HOH A 219 919 225 HOH HOH . C 3 HOH A 220 920 218 HOH HOH . C 3 HOH A 221 921 190 HOH HOH . C 3 HOH A 222 922 275 HOH HOH . C 3 HOH A 223 923 257 HOH HOH . C 3 HOH A 224 924 297 HOH HOH . C 3 HOH A 225 925 222 HOH HOH . C 3 HOH A 226 926 129 HOH HOH . C 3 HOH A 227 927 143 HOH HOH . C 3 HOH A 228 928 59 HOH HOH . C 3 HOH A 229 929 120 HOH HOH . C 3 HOH A 230 930 252 HOH HOH . C 3 HOH A 231 931 220 HOH HOH . C 3 HOH A 232 932 210 HOH HOH . C 3 HOH A 233 933 211 HOH HOH . C 3 HOH A 234 934 214 HOH HOH . C 3 HOH A 235 935 198 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . B 2 14.521 -13.006 -19.692 1 73.14 ? C1 PGE 601 A 1 HETATM 2 O O1 PGE . . . B 2 13.561 -12.552 -20.631 1 73.2 ? O1 PGE 601 A 1 HETATM 3 C C2 PGE . . . B 2 15.088 -11.861 -18.915 1 73.35 ? C2 PGE 601 A 1 HETATM 4 O O2 PGE . . . B 2 15.55 -12.329 -17.659 1 73.82 ? O2 PGE 601 A 1 HETATM 5 C C3 PGE . . . B 2 15.148 -11.51 -16.565 1 74.05 ? C3 PGE 601 A 1 HETATM 6 C C4 PGE . . . B 2 16.346 -11.178 -15.731 1 74.29 ? C4 PGE 601 A 1 HETATM 7 O O4 PGE . . . B 2 19.298 -10.757 -13.059 1 74.94 ? O4 PGE 601 A 1 HETATM 8 C C6 PGE . . . B 2 18 -10.239 -13.306 1 74.8 ? C6 PGE 601 A 1 HETATM 9 C C5 PGE . . . B 2 16.985 -11.333 -13.435 1 74.58 ? C5 PGE 601 A 1 HETATM 10 O O3 PGE . . . B 2 15.978 -10.964 -14.374 1 74.51 ? O3 PGE 601 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #