data_8QX1 # _model_server_result.job_id XOoXCq1Rtg64PuD6V-XKDg _model_server_result.datetime_utc '2024-11-06 00:01:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qx1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":1006}' # _entry.id 8QX1 # _exptl.entry_id 8QX1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 19 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QX1 _cell.length_a 242.38 _cell.length_b 242.38 _cell.length_c 396.04 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QX1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall 'I 4bw 2bw' _symmetry.space_group_name_H-M 'I 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,CA,DA 1 1 A,B,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,CA,DA 1 3 C,R,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 1 C,R,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 2 C,R,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 3 C,R,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+1 0 -1 0 -1 0 0 0 0 -1 242.38 242.38 396.04 3 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 242.38 242.38 0 4 'crystal symmetry operation' 15_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 396.04 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 Y N N ? 4 Z N N ? 4 AA N N ? 4 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 F O4 PEG . A PEG 1003 1_555 G C1 PEG . A PEG 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale2 H O4 PEG . A PEG 1005 1_555 I C1 PEG . A PEG 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale3 H C1 PEG . A PEG 1005 1_555 M O4 PEG . B PEG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? covale ? covale4 N O4 PEG . B PEG 1004 1_555 O C1 PEG . B PEG 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale5 P O4 PEG . B PEG 1006 1_555 Q C1 PEG . B PEG 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale6 T O4 PEG . C PEG 1003 1_555 U C1 PEG . C PEG 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale7 V O4 PEG . C PEG 1005 1_555 W C1 PEG . C PEG 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? covale ? covale8 X O4 PEG . C PEG 1007 1_555 Y C1 PEG . C PEG 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? covale ? covale9 AA O4 PEG . C PEG 1010 1_555 BA C1 PEG . C PEG 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 251 n n C1 C2 PEG sing 252 n n C1 H11 PEG sing 253 n n C1 H12 PEG sing 254 n n O1 HO1 PEG sing 255 n n C2 O2 PEG sing 256 n n C2 H21 PEG sing 257 n n C2 H22 PEG sing 258 n n O2 C3 PEG sing 259 n n C3 C4 PEG sing 260 n n C3 H31 PEG sing 261 n n C3 H32 PEG sing 262 n n C4 O4 PEG sing 263 n n C4 H41 PEG sing 264 n n C4 H42 PEG sing 265 n n O4 HO4 PEG sing 266 n n # _atom_sites.entry_id 8QX1 _atom_sites.fract_transf_matrix[1][1] 0.004126 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004126 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 LMR A 1 1001 1001 LMR LMR . E 3 CL A 1 1002 2 CL CL . F 4 PEG A 1 1003 6 PEG PEG . G 4 PEG A 1 1004 7 PEG PEG . H 4 PEG A 1 1005 9 PEG PEG . I 4 PEG A 1 1006 10 PEG PEG . J 4 PEG A 1 1007 22 PEG PEG . K 2 LMR B 1 1001 1002 LMR LMR . L 3 CL B 1 1002 1 CL CL . M 4 PEG B 1 1003 8 PEG PEG . N 4 PEG B 1 1004 11 PEG PEG . O 4 PEG B 1 1005 12 PEG PEG . P 4 PEG B 1 1006 20 PEG PEG . Q 4 PEG B 1 1007 21 PEG PEG . R 2 LMR C 1 1001 1003 LMR LMR . S 3 CL C 1 1002 3 CL CL . T 4 PEG C 1 1003 4 PEG PEG . U 4 PEG C 1 1004 5 PEG PEG . V 4 PEG C 1 1005 13 PEG PEG . W 4 PEG C 1 1006 14 PEG PEG . X 4 PEG C 1 1007 15 PEG PEG . Y 4 PEG C 1 1008 16 PEG PEG . Z 4 PEG C 1 1009 17 PEG PEG . AA 4 PEG C 1 1010 18 PEG PEG . BA 4 PEG C 1 1011 19 PEG PEG . CA 5 HOH A 1 1101 35 HOH HOH . CA 5 HOH A 2 1102 31 HOH HOH . CA 5 HOH A 3 1103 72 HOH HOH . CA 5 HOH A 4 1104 30 HOH HOH . CA 5 HOH A 5 1105 29 HOH HOH . CA 5 HOH A 6 1106 37 HOH HOH . CA 5 HOH A 7 1107 36 HOH HOH . CA 5 HOH A 8 1108 23 HOH HOH . CA 5 HOH A 9 1109 32 HOH HOH . CA 5 HOH A 10 1110 117 HOH HOH . CA 5 HOH A 11 1111 38 HOH HOH . CA 5 HOH A 12 1112 116 HOH HOH . CA 5 HOH A 13 1113 119 HOH HOH . CA 5 HOH A 14 1114 118 HOH HOH . CA 5 HOH A 15 1115 121 HOH HOH . CA 5 HOH A 16 1116 125 HOH HOH . CA 5 HOH A 17 1117 113 HOH HOH . CA 5 HOH A 18 1118 123 HOH HOH . CA 5 HOH A 19 1119 26 HOH HOH . CA 5 HOH A 20 1120 34 HOH HOH . CA 5 HOH A 21 1121 28 HOH HOH . CA 5 HOH A 22 1122 46 HOH HOH . CA 5 HOH A 23 1123 24 HOH HOH . CA 5 HOH A 24 1124 33 HOH HOH . CA 5 HOH A 25 1125 120 HOH HOH . CA 5 HOH A 26 1126 27 HOH HOH . CA 5 HOH A 27 1127 122 HOH HOH . CA 5 HOH A 28 1128 126 HOH HOH . CA 5 HOH A 29 1129 80 HOH HOH . CA 5 HOH A 30 1130 25 HOH HOH . CA 5 HOH A 31 1131 124 HOH HOH . DA 5 HOH B 1 1101 45 HOH HOH . DA 5 HOH B 2 1102 73 HOH HOH . DA 5 HOH B 3 1103 127 HOH HOH . DA 5 HOH B 4 1104 42 HOH HOH . DA 5 HOH B 5 1105 43 HOH HOH . DA 5 HOH B 6 1106 112 HOH HOH . DA 5 HOH B 7 1107 39 HOH HOH . DA 5 HOH B 8 1108 110 HOH HOH . DA 5 HOH B 9 1109 115 HOH HOH . DA 5 HOH B 10 1110 109 HOH HOH . DA 5 HOH B 11 1111 114 HOH HOH . DA 5 HOH B 12 1112 40 HOH HOH . DA 5 HOH B 13 1113 41 HOH HOH . DA 5 HOH B 14 1114 111 HOH HOH . DA 5 HOH B 15 1115 44 HOH HOH . EA 5 HOH C 1 1101 108 HOH HOH . EA 5 HOH C 2 1102 75 HOH HOH . EA 5 HOH C 3 1103 104 HOH HOH . EA 5 HOH C 4 1104 98 HOH HOH . EA 5 HOH C 5 1105 107 HOH HOH . EA 5 HOH C 6 1106 61 HOH HOH . EA 5 HOH C 7 1107 68 HOH HOH . EA 5 HOH C 8 1108 65 HOH HOH . EA 5 HOH C 9 1109 55 HOH HOH . EA 5 HOH C 10 1110 64 HOH HOH . EA 5 HOH C 11 1111 63 HOH HOH . EA 5 HOH C 12 1112 47 HOH HOH . EA 5 HOH C 13 1113 54 HOH HOH . EA 5 HOH C 14 1114 89 HOH HOH . EA 5 HOH C 15 1115 56 HOH HOH . EA 5 HOH C 16 1116 106 HOH HOH . EA 5 HOH C 17 1117 71 HOH HOH . EA 5 HOH C 18 1118 67 HOH HOH . EA 5 HOH C 19 1119 74 HOH HOH . EA 5 HOH C 20 1120 88 HOH HOH . EA 5 HOH C 21 1121 50 HOH HOH . EA 5 HOH C 22 1122 85 HOH HOH . EA 5 HOH C 23 1123 87 HOH HOH . EA 5 HOH C 24 1124 83 HOH HOH . EA 5 HOH C 25 1125 49 HOH HOH . EA 5 HOH C 26 1126 97 HOH HOH . EA 5 HOH C 27 1127 102 HOH HOH . EA 5 HOH C 28 1128 51 HOH HOH . EA 5 HOH C 29 1129 103 HOH HOH . EA 5 HOH C 30 1130 105 HOH HOH . EA 5 HOH C 31 1131 84 HOH HOH . EA 5 HOH C 32 1132 60 HOH HOH . EA 5 HOH C 33 1133 86 HOH HOH . EA 5 HOH C 34 1134 91 HOH HOH . EA 5 HOH C 35 1135 82 HOH HOH . EA 5 HOH C 36 1136 69 HOH HOH . EA 5 HOH C 37 1137 93 HOH HOH . EA 5 HOH C 38 1138 76 HOH HOH . EA 5 HOH C 39 1139 48 HOH HOH . EA 5 HOH C 40 1140 95 HOH HOH . EA 5 HOH C 41 1141 99 HOH HOH . EA 5 HOH C 42 1142 66 HOH HOH . EA 5 HOH C 43 1143 96 HOH HOH . EA 5 HOH C 44 1144 62 HOH HOH . EA 5 HOH C 45 1145 100 HOH HOH . EA 5 HOH C 46 1146 94 HOH HOH . EA 5 HOH C 47 1147 77 HOH HOH . EA 5 HOH C 48 1148 90 HOH HOH . EA 5 HOH C 49 1149 52 HOH HOH . EA 5 HOH C 50 1150 92 HOH HOH . EA 5 HOH C 51 1151 57 HOH HOH . EA 5 HOH C 52 1152 59 HOH HOH . EA 5 HOH C 53 1153 81 HOH HOH . EA 5 HOH C 54 1154 53 HOH HOH . EA 5 HOH C 55 1155 58 HOH HOH . EA 5 HOH C 56 1156 78 HOH HOH . EA 5 HOH C 57 1157 70 HOH HOH . EA 5 HOH C 58 1158 79 HOH HOH . EA 5 HOH C 59 1159 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . P 4 82.858 105.777 319.338 1 93.67 ? C1 PEG 1006 B 1 HETATM 2 O O1 PEG . . . P 4 83.518 106.976 319.674 1 75.21 ? O1 PEG 1006 B 1 HETATM 3 C C2 PEG . . . P 4 83.883 104.646 319.194 1 109.31 ? C2 PEG 1006 B 1 HETATM 4 O O2 PEG . . . P 4 83.304 103.388 319.443 1 113.09 ? O2 PEG 1006 B 1 HETATM 5 C C3 PEG . . . P 4 83.448 102.928 320.762 1 104.42 ? C3 PEG 1006 B 1 HETATM 6 C C4 PEG . . . P 4 83.905 101.47 320.779 1 98.44 ? C4 PEG 1006 B 1 HETATM 7 O O4 PEG . . . P 4 83.581 100.9 322.022 1 92.54 ? O4 PEG 1006 B 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 43 _model_server_stats.create_model_time_ms 62 _model_server_stats.query_time_ms 216 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 7 #