data_8QX7
#
_model_server_result.job_id            hP2Ow3bT_RjN_k1wqeguYQ 
_model_server_result.datetime_utc      '2025-09-07 08:36:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qx7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    8QX7 
#
_exptl.entry_id    8QX7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              104.061 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'MALONIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.88 
_cell.angle_gamma         90 
_cell.entry_id            8QX7 
_cell.length_a            111.929 
_cell.length_b            52.925 
_cell.length_c            48.595 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QX7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             104 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              103 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             104 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              103 
_struct_conn.ptnr2_symmetry                 4_556 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.055 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C3 H4 O4' 
_chem_comp.formula_weight    104.061 
_chem_comp.id                MLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MALONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'DICARBOXYLIC ACID C3;PROPANEDIOLIC ACID;METHANEDICARBOXYLIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1A MLA sing 237 n n 
C1 O1B MLA doub 238 n n 
C1 C2 MLA sing 239 n n 
O1A H1A MLA sing 240 n n 
C2 C3 MLA sing 241 n n 
C2 HC21 MLA sing 242 n n 
C2 HC22 MLA sing 243 n n 
C3 O3A MLA doub 244 n n 
C3 O3B MLA sing 245 n n 
O3B H3B MLA sing 246 n n 
#
_atom_sites.entry_id                     8QX7 
_atom_sites.fract_transf_matrix[1][1]    0.008934 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001078 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018895 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020728 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MLA A 1 201 201 MLA MLA . 
D 2 MLA B 1 201 202 MLA MLA . 
E 3 HOH A 1 301 78 HOH HOH . 
E 3 HOH A 2 302 1 HOH HOH . 
E 3 HOH A 3 303 26 HOH HOH . 
E 3 HOH A 4 304 97 HOH HOH . 
E 3 HOH A 5 305 2 HOH HOH . 
E 3 HOH A 6 306 4 HOH HOH . 
E 3 HOH A 7 307 11 HOH HOH . 
E 3 HOH A 8 308 74 HOH HOH . 
E 3 HOH A 9 309 40 HOH HOH . 
E 3 HOH A 10 310 16 HOH HOH . 
E 3 HOH A 11 311 32 HOH HOH . 
E 3 HOH A 12 312 19 HOH HOH . 
E 3 HOH A 13 313 8 HOH HOH . 
E 3 HOH A 14 314 65 HOH HOH . 
E 3 HOH A 15 315 53 HOH HOH . 
E 3 HOH A 16 316 95 HOH HOH . 
E 3 HOH A 17 317 15 HOH HOH . 
E 3 HOH A 18 318 43 HOH HOH . 
E 3 HOH A 19 319 45 HOH HOH . 
E 3 HOH A 20 320 56 HOH HOH . 
E 3 HOH A 21 321 34 HOH HOH . 
E 3 HOH A 22 322 47 HOH HOH . 
E 3 HOH A 23 323 25 HOH HOH . 
E 3 HOH A 24 324 63 HOH HOH . 
E 3 HOH A 25 325 39 HOH HOH . 
E 3 HOH A 26 326 7 HOH HOH . 
E 3 HOH A 27 327 67 HOH HOH . 
E 3 HOH A 28 328 73 HOH HOH . 
E 3 HOH A 29 329 41 HOH HOH . 
E 3 HOH A 30 330 96 HOH HOH . 
E 3 HOH A 31 331 85 HOH HOH . 
E 3 HOH A 32 332 35 HOH HOH . 
E 3 HOH A 33 333 93 HOH HOH . 
E 3 HOH A 34 334 88 HOH HOH . 
E 3 HOH A 35 335 83 HOH HOH . 
E 3 HOH A 36 336 61 HOH HOH . 
E 3 HOH A 37 337 51 HOH HOH . 
E 3 HOH A 38 338 58 HOH HOH . 
E 3 HOH A 39 339 107 HOH HOH . 
E 3 HOH A 40 340 92 HOH HOH . 
E 3 HOH A 41 341 29 HOH HOH . 
E 3 HOH A 42 342 10 HOH HOH . 
E 3 HOH A 43 343 84 HOH HOH . 
E 3 HOH A 44 344 106 HOH HOH . 
E 3 HOH A 45 345 75 HOH HOH . 
E 3 HOH A 46 346 111 HOH HOH . 
E 3 HOH A 47 347 36 HOH HOH . 
E 3 HOH A 48 348 81 HOH HOH . 
E 3 HOH A 49 349 60 HOH HOH . 
E 3 HOH A 50 350 68 HOH HOH . 
F 3 HOH B 1 301 100 HOH HOH . 
F 3 HOH B 2 302 12 HOH HOH . 
F 3 HOH B 3 303 109 HOH HOH . 
F 3 HOH B 4 304 108 HOH HOH . 
F 3 HOH B 5 305 76 HOH HOH . 
F 3 HOH B 6 306 17 HOH HOH . 
F 3 HOH B 7 307 9 HOH HOH . 
F 3 HOH B 8 308 57 HOH HOH . 
F 3 HOH B 9 309 91 HOH HOH . 
F 3 HOH B 10 310 3 HOH HOH . 
F 3 HOH B 11 311 6 HOH HOH . 
F 3 HOH B 12 312 30 HOH HOH . 
F 3 HOH B 13 313 44 HOH HOH . 
F 3 HOH B 14 314 5 HOH HOH . 
F 3 HOH B 15 315 13 HOH HOH . 
F 3 HOH B 16 316 27 HOH HOH . 
F 3 HOH B 17 317 24 HOH HOH . 
F 3 HOH B 18 318 110 HOH HOH . 
F 3 HOH B 19 319 104 HOH HOH . 
F 3 HOH B 20 320 14 HOH HOH . 
F 3 HOH B 21 321 46 HOH HOH . 
F 3 HOH B 22 322 52 HOH HOH . 
F 3 HOH B 23 323 31 HOH HOH . 
F 3 HOH B 24 324 18 HOH HOH . 
F 3 HOH B 25 325 103 HOH HOH . 
F 3 HOH B 26 326 22 HOH HOH . 
F 3 HOH B 27 327 66 HOH HOH . 
F 3 HOH B 28 328 50 HOH HOH . 
F 3 HOH B 29 329 59 HOH HOH . 
F 3 HOH B 30 330 21 HOH HOH . 
F 3 HOH B 31 331 86 HOH HOH . 
F 3 HOH B 32 332 101 HOH HOH . 
F 3 HOH B 33 333 38 HOH HOH . 
F 3 HOH B 34 334 89 HOH HOH . 
F 3 HOH B 35 335 28 HOH HOH . 
F 3 HOH B 36 336 55 HOH HOH . 
F 3 HOH B 37 337 72 HOH HOH . 
F 3 HOH B 38 338 79 HOH HOH . 
F 3 HOH B 39 339 70 HOH HOH . 
F 3 HOH B 40 340 77 HOH HOH . 
F 3 HOH B 41 341 105 HOH HOH . 
F 3 HOH B 42 342 49 HOH HOH . 
F 3 HOH B 43 343 33 HOH HOH . 
F 3 HOH B 44 344 94 HOH HOH . 
F 3 HOH B 45 345 71 HOH HOH . 
F 3 HOH B 46 346 99 HOH HOH . 
F 3 HOH B 47 347 54 HOH HOH . 
F 3 HOH B 48 348 69 HOH HOH . 
F 3 HOH B 49 349 82 HOH HOH . 
F 3 HOH B 50 350 37 HOH HOH . 
F 3 HOH B 51 351 80 HOH HOH . 
F 3 HOH B 52 352 90 HOH HOH . 
F 3 HOH B 53 353 102 HOH HOH . 
F 3 HOH B 54 354 64 HOH HOH . 
F 3 HOH B 55 355 20 HOH HOH . 
F 3 HOH B 56 356 62 HOH HOH . 
F 3 HOH B 57 357 48 HOH HOH . 
F 3 HOH B 58 358 42 HOH HOH . 
F 3 HOH B 59 359 23 HOH HOH . 
F 3 HOH B 60 360 87 HOH HOH . 
F 3 HOH B 61 361 98 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MLA . . . C 2 13.711 -3.438 32.583 1 42.47 ? C1 MLA 201 A 1 
HETATM 2 O O1A MLA . . . C 2 13.628 -3.811 33.767 1 41.67 ? O1A MLA 201 A 1 
HETATM 3 O O1B MLA . . . C 2 14.793 -3.1 32.043 1 41.69 ? O1B MLA 201 A 1 
HETATM 4 C C2 MLA . . . C 2 12.404 -3.407 31.746 1 36.83 ? C2 MLA 201 A 1 
HETATM 5 C C3 MLA . . . C 2 12.626 -3.181 30.244 1 37.64 ? C3 MLA 201 A 1 
HETATM 6 O O3A MLA . . . C 2 11.726 -3.571 29.454 1 31.5 ? O3A MLA 201 A 1 
HETATM 7 O O3B MLA . . . C 2 13.697 -2.617 29.932 1 41.94 ? O3B MLA 201 A 1 
HETATM 8 H HC21 MLA . . . C 2 11.822 -2.701 32.067 1 44.21 ? HC21 MLA 201 A 1 
HETATM 9 H HC22 MLA . . . C 2 11.925 -4.244 31.849 1 44.21 ? HC22 MLA 201 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#