data_8QYZ # _model_server_result.job_id gPlPPfRvqtRUNuplLJeTgw _model_server_result.datetime_utc '2024-11-07 04:39:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qyz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":203}' # _entry.id 8QYZ # _exptl.entry_id 8QYZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 82.08 _cell.angle_beta 86.668 _cell.angle_gamma 76.668 _cell.entry_id 8QYZ _cell.length_a 97.355 _cell.length_b 105.572 _cell.length_c 170.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QYZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 ? trimeric 3 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,M,N,O,Y,Z 1 1 C,D,J,P,Q,R,AA,BA 2 1 E,F,K,S,T,U,CA,DA 3 1 G,H,L,V,W,X,EA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 O N N ? 6 R N N ? 6 U N N ? 6 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 26 A THR 26 1_555 N MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc2 A OG1 THR 44 A THR 44 1_555 N MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc3 M O1G GTP . A GTP 201 1_555 N MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc4 M O1B GTP . A GTP 201 1_555 N MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc5 N MG MG . A MG 202 1_555 Y O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc6 C OG1 THR 26 B THR 26 1_555 Q MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc7 C OG1 THR 44 B THR 44 1_555 Q MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc8 P O1G GTP . B GTP 201 1_555 Q MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc9 P O1B GTP . B GTP 201 1_555 Q MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc10 Q MG MG . B MG 202 1_555 AA O HOH . B HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc11 E OG1 THR 26 E THR 26 1_555 T MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc12 E OG1 THR 44 E THR 44 1_555 T MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc13 S O1G GTP . E GTP 201 1_555 T MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc14 S O1B GTP . E GTP 201 1_555 T MG MG . E MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc15 G OG1 THR 26 G THR 26 1_555 W MG MG . G MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc16 G OG1 THR 44 G THR 44 1_555 W MG MG . G MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc17 V O1G GTP . G GTP 201 1_555 W MG MG . G MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc18 V O1B GTP . G GTP 201 1_555 W MG MG . G MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 8QYZ _atom_sites.fract_transf_matrix[1][1] 0.010272 _atom_sites.fract_transf_matrix[1][2] -0.002434 _atom_sites.fract_transf_matrix[1][3] -0.000289 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009735 _atom_sites.fract_transf_matrix[2][3] -0.001257 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005927 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 GTP A 1 201 201 GTP GTP . N 5 MG A 1 202 202 MG MG . O 6 ACT A 1 203 210 ACT ACT . P 4 GTP B 1 201 201 GTP GTP . Q 5 MG B 1 202 202 MG MG . R 6 ACT B 1 203 210 ACT ACT . S 4 GTP E 1 201 201 GTP GTP . T 5 MG E 1 202 202 MG MG . U 6 ACT E 1 203 210 ACT ACT . V 4 GTP G 1 201 201 GTP GTP . W 5 MG G 1 202 202 MG MG . X 6 ACT G 1 203 210 ACT ACT . Y 7 HOH A 1 301 204 HOH HOH . Y 7 HOH A 2 302 77 HOH HOH . Y 7 HOH A 3 303 173 HOH HOH . Y 7 HOH A 4 304 125 HOH HOH . Y 7 HOH A 5 305 64 HOH HOH . Y 7 HOH A 6 306 208 HOH HOH . Y 7 HOH A 7 307 98 HOH HOH . Y 7 HOH A 8 308 97 HOH HOH . Y 7 HOH A 9 309 192 HOH HOH . Y 7 HOH A 10 310 119 HOH HOH . Y 7 HOH A 11 311 14 HOH HOH . Y 7 HOH A 12 312 69 HOH HOH . Y 7 HOH A 13 313 183 HOH HOH . Y 7 HOH A 14 314 195 HOH HOH . Y 7 HOH A 15 315 197 HOH HOH . Y 7 HOH A 16 316 135 HOH HOH . Y 7 HOH A 17 317 158 HOH HOH . Y 7 HOH A 18 318 79 HOH HOH . Z 7 HOH C 1 1101 43 HOH HOH . Z 7 HOH C 2 1102 91 HOH HOH . Z 7 HOH C 3 1103 140 HOH HOH . Z 7 HOH C 4 1104 111 HOH HOH . Z 7 HOH C 5 1105 152 HOH HOH . Z 7 HOH C 6 1106 99 HOH HOH . Z 7 HOH C 7 1107 33 HOH HOH . Z 7 HOH C 8 1108 40 HOH HOH . Z 7 HOH C 9 1109 168 HOH HOH . Z 7 HOH C 10 1110 93 HOH HOH . Z 7 HOH C 11 1111 137 HOH HOH . Z 7 HOH C 12 1112 88 HOH HOH . Z 7 HOH C 13 1113 22 HOH HOH . Z 7 HOH C 14 1114 66 HOH HOH . Z 7 HOH C 15 1115 167 HOH HOH . Z 7 HOH C 16 1116 198 HOH HOH . Z 7 HOH C 17 1117 21 HOH HOH . Z 7 HOH C 18 1118 63 HOH HOH . Z 7 HOH C 19 1119 12 HOH HOH . Z 7 HOH C 20 1120 106 HOH HOH . Z 7 HOH C 21 1121 150 HOH HOH . Z 7 HOH C 22 1122 206 HOH HOH . Z 7 HOH C 23 1123 161 HOH HOH . Z 7 HOH C 24 1124 147 HOH HOH . Z 7 HOH C 25 1125 5 HOH HOH . Z 7 HOH C 26 1126 194 HOH HOH . Z 7 HOH C 27 1127 37 HOH HOH . Z 7 HOH C 28 1128 141 HOH HOH . Z 7 HOH C 29 1129 188 HOH HOH . Z 7 HOH C 30 1130 16 HOH HOH . Z 7 HOH C 31 1131 3 HOH HOH . Z 7 HOH C 32 1132 154 HOH HOH . Z 7 HOH C 33 1133 112 HOH HOH . Z 7 HOH C 34 1134 118 HOH HOH . Z 7 HOH C 35 1135 31 HOH HOH . Z 7 HOH C 36 1136 29 HOH HOH . Z 7 HOH C 37 1137 89 HOH HOH . Z 7 HOH C 38 1138 70 HOH HOH . Z 7 HOH C 39 1139 92 HOH HOH . Z 7 HOH C 40 1140 1 HOH HOH . Z 7 HOH C 41 1141 129 HOH HOH . Z 7 HOH C 42 1142 19 HOH HOH . Z 7 HOH C 43 1143 117 HOH HOH . Z 7 HOH C 44 1144 124 HOH HOH . Z 7 HOH C 45 1145 176 HOH HOH . Z 7 HOH C 46 1146 166 HOH HOH . Z 7 HOH C 47 1147 171 HOH HOH . Z 7 HOH C 48 1148 113 HOH HOH . Z 7 HOH C 49 1149 207 HOH HOH . Z 7 HOH C 50 1150 159 HOH HOH . Z 7 HOH C 51 1151 105 HOH HOH . Z 7 HOH C 52 1152 187 HOH HOH . Z 7 HOH C 53 1153 172 HOH HOH . Z 7 HOH C 54 1154 146 HOH HOH . Z 7 HOH C 55 1155 15 HOH HOH . Z 7 HOH C 56 1156 90 HOH HOH . Z 7 HOH C 57 1157 75 HOH HOH . Z 7 HOH C 58 1158 128 HOH HOH . Z 7 HOH C 59 1159 28 HOH HOH . Z 7 HOH C 60 1160 131 HOH HOH . Z 7 HOH C 61 1161 39 HOH HOH . Z 7 HOH C 62 1162 116 HOH HOH . Z 7 HOH C 63 1163 50 HOH HOH . Z 7 HOH C 64 1164 94 HOH HOH . Z 7 HOH C 65 1165 143 HOH HOH . Z 7 HOH C 66 1166 153 HOH HOH . Z 7 HOH C 67 1167 151 HOH HOH . Z 7 HOH C 68 1168 130 HOH HOH . Z 7 HOH C 69 1169 136 HOH HOH . Z 7 HOH C 70 1170 82 HOH HOH . Z 7 HOH C 71 1171 178 HOH HOH . Z 7 HOH C 72 1172 49 HOH HOH . Z 7 HOH C 73 1173 53 HOH HOH . Z 7 HOH C 74 1174 189 HOH HOH . Z 7 HOH C 75 1175 17 HOH HOH . Z 7 HOH C 76 1176 193 HOH HOH . AA 7 HOH B 1 301 205 HOH HOH . AA 7 HOH B 2 302 65 HOH HOH . AA 7 HOH B 3 303 196 HOH HOH . AA 7 HOH B 4 304 102 HOH HOH . AA 7 HOH B 5 305 13 HOH HOH . AA 7 HOH B 6 306 163 HOH HOH . BA 7 HOH D 1 1101 9 HOH HOH . BA 7 HOH D 2 1102 201 HOH HOH . BA 7 HOH D 3 1103 115 HOH HOH . BA 7 HOH D 4 1104 84 HOH HOH . BA 7 HOH D 5 1105 25 HOH HOH . BA 7 HOH D 6 1106 83 HOH HOH . BA 7 HOH D 7 1107 134 HOH HOH . BA 7 HOH D 8 1108 104 HOH HOH . BA 7 HOH D 9 1109 80 HOH HOH . BA 7 HOH D 10 1110 42 HOH HOH . BA 7 HOH D 11 1111 41 HOH HOH . BA 7 HOH D 12 1112 185 HOH HOH . BA 7 HOH D 13 1113 164 HOH HOH . BA 7 HOH D 14 1114 67 HOH HOH . BA 7 HOH D 15 1115 46 HOH HOH . BA 7 HOH D 16 1116 155 HOH HOH . BA 7 HOH D 17 1117 34 HOH HOH . BA 7 HOH D 18 1118 4 HOH HOH . BA 7 HOH D 19 1119 162 HOH HOH . BA 7 HOH D 20 1120 58 HOH HOH . BA 7 HOH D 21 1121 44 HOH HOH . BA 7 HOH D 22 1122 95 HOH HOH . BA 7 HOH D 23 1123 48 HOH HOH . BA 7 HOH D 24 1124 20 HOH HOH . BA 7 HOH D 25 1125 144 HOH HOH . BA 7 HOH D 26 1126 36 HOH HOH . BA 7 HOH D 27 1127 60 HOH HOH . BA 7 HOH D 28 1128 32 HOH HOH . BA 7 HOH D 29 1129 76 HOH HOH . BA 7 HOH D 30 1130 184 HOH HOH . BA 7 HOH D 31 1131 109 HOH HOH . BA 7 HOH D 32 1132 18 HOH HOH . BA 7 HOH D 33 1133 169 HOH HOH . BA 7 HOH D 34 1134 126 HOH HOH . BA 7 HOH D 35 1135 35 HOH HOH . BA 7 HOH D 36 1136 142 HOH HOH . BA 7 HOH D 37 1137 122 HOH HOH . BA 7 HOH D 38 1138 52 HOH HOH . BA 7 HOH D 39 1139 199 HOH HOH . BA 7 HOH D 40 1140 26 HOH HOH . BA 7 HOH D 41 1141 96 HOH HOH . BA 7 HOH D 42 1142 68 HOH HOH . BA 7 HOH D 43 1143 186 HOH HOH . BA 7 HOH D 44 1144 100 HOH HOH . BA 7 HOH D 45 1145 54 HOH HOH . BA 7 HOH D 46 1146 132 HOH HOH . BA 7 HOH D 47 1147 38 HOH HOH . BA 7 HOH D 48 1148 27 HOH HOH . BA 7 HOH D 49 1149 2 HOH HOH . BA 7 HOH D 50 1150 24 HOH HOH . BA 7 HOH D 51 1151 175 HOH HOH . BA 7 HOH D 52 1152 10 HOH HOH . BA 7 HOH D 53 1153 182 HOH HOH . BA 7 HOH D 54 1154 191 HOH HOH . BA 7 HOH D 55 1155 202 HOH HOH . BA 7 HOH D 56 1156 103 HOH HOH . BA 7 HOH D 57 1157 51 HOH HOH . BA 7 HOH D 58 1158 72 HOH HOH . BA 7 HOH D 59 1159 86 HOH HOH . BA 7 HOH D 60 1160 71 HOH HOH . CA 7 HOH E 1 301 177 HOH HOH . DA 7 HOH F 1 1101 47 HOH HOH . DA 7 HOH F 2 1102 23 HOH HOH . DA 7 HOH F 3 1103 74 HOH HOH . DA 7 HOH F 4 1104 149 HOH HOH . DA 7 HOH F 5 1105 123 HOH HOH . DA 7 HOH F 6 1106 179 HOH HOH . DA 7 HOH F 7 1107 170 HOH HOH . DA 7 HOH F 8 1108 56 HOH HOH . DA 7 HOH F 9 1109 107 HOH HOH . DA 7 HOH F 10 1110 190 HOH HOH . DA 7 HOH F 11 1111 165 HOH HOH . DA 7 HOH F 12 1112 160 HOH HOH . DA 7 HOH F 13 1113 61 HOH HOH . DA 7 HOH F 14 1114 133 HOH HOH . DA 7 HOH F 15 1115 55 HOH HOH . DA 7 HOH F 16 1116 11 HOH HOH . DA 7 HOH F 17 1117 127 HOH HOH . DA 7 HOH F 18 1118 81 HOH HOH . DA 7 HOH F 19 1119 156 HOH HOH . DA 7 HOH F 20 1120 148 HOH HOH . DA 7 HOH F 21 1121 180 HOH HOH . DA 7 HOH F 22 1122 203 HOH HOH . DA 7 HOH F 23 1123 73 HOH HOH . DA 7 HOH F 24 1124 7 HOH HOH . DA 7 HOH F 25 1125 181 HOH HOH . DA 7 HOH F 26 1126 209 HOH HOH . EA 7 HOH H 1 1101 8 HOH HOH . EA 7 HOH H 2 1102 87 HOH HOH . EA 7 HOH H 3 1103 78 HOH HOH . EA 7 HOH H 4 1104 45 HOH HOH . EA 7 HOH H 5 1105 108 HOH HOH . EA 7 HOH H 6 1106 138 HOH HOH . EA 7 HOH H 7 1107 121 HOH HOH . EA 7 HOH H 8 1108 145 HOH HOH . EA 7 HOH H 9 1109 174 HOH HOH . EA 7 HOH H 10 1110 139 HOH HOH . EA 7 HOH H 11 1111 157 HOH HOH . EA 7 HOH H 12 1112 6 HOH HOH . EA 7 HOH H 13 1113 110 HOH HOH . EA 7 HOH H 14 1114 57 HOH HOH . EA 7 HOH H 15 1115 30 HOH HOH . EA 7 HOH H 16 1116 62 HOH HOH . EA 7 HOH H 17 1117 85 HOH HOH . EA 7 HOH H 18 1118 114 HOH HOH . EA 7 HOH H 19 1119 200 HOH HOH . EA 7 HOH H 20 1120 101 HOH HOH . EA 7 HOH H 21 1121 120 HOH HOH . EA 7 HOH H 22 1122 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . R 6 57.25 51.456 27.51 1 63.83 0 C ACT 203 B 1 HETATM 2 O O ACT . . . R 6 57.14 52.673 27.251 1 65.39 0 O ACT 203 B 1 HETATM 3 O OXT ACT . . . R 6 58.079 50.99 28.301 1 64.42 0 OXT ACT 203 B 1 HETATM 4 C CH3 ACT . . . R 6 56.314 50.469 26.832 1 62.55 0 CH3 ACT 203 B 1 # _model_server_stats.io_time_ms 92 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 52 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #