data_8QZ4 # _model_server_result.job_id vnqqz7EfgHktcdSgQcME7g _model_server_result.datetime_utc '2024-10-18 08:35:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8qz4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":401}' # _entry.id 8QZ4 # _exptl.entry_id 8QZ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 137.327 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BARIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8QZ4 _cell.length_a 68.28 _cell.length_b 75.576 _cell.length_c 259.15 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8QZ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 58 A CYS 123 1_555 B SG CYS 58 B CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 C SG CYS 22 C CYS 22 1_555 C SG CYS 95 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 D SG CYS 22 D CYS 22 1_555 D SG CYS 95 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A O THR 107 A THR 172 1_555 F BA BA . A BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.845 ? metalc ? metalc2 A O ILE 108 A ILE 173 1_555 F BA BA . A BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc3 A O GLY 109 A GLY 174 1_555 E BA BA . A BA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc4 A O TYR 110 A TYR 175 1_555 E BA BA . A BA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? metalc ? metalc5 A O THR 216 A THR 281 1_555 F BA BA . A BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc6 A O VAL 217 A VAL 282 1_555 F BA BA . A BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc7 A O GLY 218 A GLY 283 1_555 E BA BA . A BA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc8 A O PHE 219 A PHE 284 1_555 E BA BA . A BA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.273 ? metalc ? metalc9 E BA BA . A BA 401 1_555 B O GLY 109 B GLY 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? metalc ? metalc10 E BA BA . A BA 401 1_555 B O TYR 110 B TYR 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc11 E BA BA . A BA 401 1_555 B O GLY 218 B GLY 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc12 E BA BA . A BA 401 1_555 B O PHE 219 B PHE 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.143 ? metalc ? metalc13 F BA BA . A BA 402 1_555 B O THR 107 B THR 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? metalc ? metalc14 F BA BA . A BA 402 1_555 B O ILE 108 B ILE 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc15 F BA BA . A BA 402 1_555 B O THR 216 B THR 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc16 F BA BA . A BA 402 1_555 B O VAL 217 B VAL 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc17 B O LYS 164 B LYS 229 1_555 K BA BA . B BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.062 ? metalc ? metalc18 B OE1 GLN 165 B GLN 230 1_555 K BA BA . B BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.285 ? # _chem_comp.formula 'Ba 2' _chem_comp.formula_weight 137.327 _chem_comp.id BA _chem_comp.mon_nstd_flag . _chem_comp.name 'BARIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8QZ4 _atom_sites.fract_transf_matrix[1][1] 0.014646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013232 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003859 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 BA A 1 401 402 BA BA . F 3 BA A 1 402 403 BA BA . G 4 Y01 A 1 403 501 Y01 Y01 . H 4 Y01 A 1 404 502 Y01 Y01 . I 4 Y01 A 1 405 502 Y01 Y01 . J 3 BA B 1 401 401 BA BA . K 3 BA B 1 402 401 BA BA . L 4 Y01 B 1 403 501 Y01 Y01 . M 5 HOH A 1 501 1 HOH HOH . M 5 HOH A 2 502 5 HOH HOH . M 5 HOH A 3 503 4 HOH HOH . N 5 HOH B 1 501 8 HOH HOH . N 5 HOH B 2 502 2 HOH HOH . N 5 HOH B 3 503 3 HOH HOH . N 5 HOH B 4 504 6 HOH HOH . O 5 HOH C 1 201 7 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BA _atom_site.label_atom_id BA _atom_site.label_comp_id BA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x 23.143 _atom_site.Cartn_y 10.885 _atom_site.Cartn_z 289.291 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 106.13 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id BA _atom_site.auth_comp_id BA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #