data_8QZ4
#
_model_server_result.job_id            MUlBH0ZcfTHk-InIVmUMyQ 
_model_server_result.datetime_utc      '2024-11-26 12:01:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8qz4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":403}' 
#
_entry.id    8QZ4 
#
_exptl.entry_id    8QZ4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8QZ4 
_cell.length_a            68.28 
_cell.length_b            75.576 
_cell.length_c            259.15 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8QZ4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 58 A CYS 123 1_555 B SG CYS 58 B CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf2 C SG CYS 22 C CYS 22 1_555 C SG CYS 95 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 D SG CYS 22 D CYS 22 1_555 D SG CYS 95 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc1 A O THR 107 A THR 172 1_555 F BA BA . A BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.845 ? 
metalc ? metalc2 A O ILE 108 A ILE 173 1_555 F BA BA . A BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? 
metalc ? metalc3 A O GLY 109 A GLY 174 1_555 E BA BA . A BA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? 
metalc ? metalc4 A O TYR 110 A TYR 175 1_555 E BA BA . A BA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? 
metalc ? metalc5 A O THR 216 A THR 281 1_555 F BA BA . A BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? 
metalc ? metalc6 A O VAL 217 A VAL 282 1_555 F BA BA . A BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? 
metalc ? metalc7 A O GLY 218 A GLY 283 1_555 E BA BA . A BA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? 
metalc ? metalc8 A O PHE 219 A PHE 284 1_555 E BA BA . A BA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.273 ? 
metalc ? metalc9 E BA BA . A BA 401 1_555 B O GLY 109 B GLY 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? 
metalc ? metalc10 E BA BA . A BA 401 1_555 B O TYR 110 B TYR 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? 
metalc ? metalc11 E BA BA . A BA 401 1_555 B O GLY 218 B GLY 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? 
metalc ? metalc12 E BA BA . A BA 401 1_555 B O PHE 219 B PHE 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.143 ? 
metalc ? metalc13 F BA BA . A BA 402 1_555 B O THR 107 B THR 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? 
metalc ? metalc14 F BA BA . A BA 402 1_555 B O ILE 108 B ILE 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? 
metalc ? metalc15 F BA BA . A BA 402 1_555 B O THR 216 B THR 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? 
metalc ? metalc16 F BA BA . A BA 402 1_555 B O VAL 217 B VAL 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? 
metalc ? metalc17 B O LYS 164 B LYS 229 1_555 K BA BA . B BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.062 ? 
metalc ? metalc18 B OE1 GLN 165 B GLN 230 1_555 K BA BA . B BA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.285 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 376 n n 
CBA CAB Y01 sing 377 n n 
CBA CAN Y01 sing 378 n n 
CAN CAJ Y01 sing 379 n n 
CAJ CAO Y01 sing 380 n n 
CAO CBB Y01 sing 381 n n 
CBB CAC Y01 sing 382 n n 
CBB CBE Y01 sing 383 n n 
CBE CAP Y01 sing 384 n n 
CBE CBI Y01 sing 385 n n 
CAP CAQ Y01 sing 386 n n 
CAQ CBG Y01 sing 387 n n 
CBG CBI Y01 sing 388 n n 
CBG CBD Y01 sing 389 n n 
CBI CAE Y01 sing 390 n n 
CBI CAU Y01 sing 391 n n 
CAU CAS Y01 sing 392 n n 
CAS CBF Y01 sing 393 n n 
CBF CBD Y01 sing 394 n n 
CBF CBH Y01 sing 395 n n 
CBD CAK Y01 sing 396 n n 
CAK CAI Y01 sing 397 n n 
CAI CAZ Y01 doub 398 n n 
CAZ CAV Y01 sing 399 n n 
CAZ CBH Y01 sing 400 n n 
CAV CBC Y01 sing 401 n n 
CBH CAD Y01 sing 402 n n 
CBH CAT Y01 sing 403 n n 
CAT CAR Y01 sing 404 n n 
CAR CBC Y01 sing 405 n n 
CBC OAW Y01 sing 406 n n 
OAW CAY Y01 sing 407 n n 
CAY OAG Y01 doub 408 n n 
CAY CAM Y01 sing 409 n n 
CAM CAL Y01 sing 410 n n 
CAL CAX Y01 sing 411 n n 
CAX OAH Y01 sing 412 n n 
CAX OAF Y01 doub 413 n n 
CAA HAA1 Y01 sing 414 n n 
CAA HAA2 Y01 sing 415 n n 
CAA HAA3 Y01 sing 416 n n 
CBA HBA Y01 sing 417 n n 
CAB HAB1 Y01 sing 418 n n 
CAB HAB2 Y01 sing 419 n n 
CAB HAB3 Y01 sing 420 n n 
CAN HAN1 Y01 sing 421 n n 
CAN HAN2 Y01 sing 422 n n 
CAJ HAJ1 Y01 sing 423 n n 
CAJ HAJ2 Y01 sing 424 n n 
CAO HAO1 Y01 sing 425 n n 
CAO HAO2 Y01 sing 426 n n 
CBB HBB Y01 sing 427 n n 
CAC HAC1 Y01 sing 428 n n 
CAC HAC2 Y01 sing 429 n n 
CAC HAC3 Y01 sing 430 n n 
CBE HBE Y01 sing 431 n n 
CAP HAP1 Y01 sing 432 n n 
CAP HAP2 Y01 sing 433 n n 
CAQ HAQ1 Y01 sing 434 n n 
CAQ HAQ2 Y01 sing 435 n n 
CBG HBG Y01 sing 436 n n 
CBD HBD Y01 sing 437 n n 
CAE HAE1 Y01 sing 438 n n 
CAE HAE2 Y01 sing 439 n n 
CAE HAE3 Y01 sing 440 n n 
CAU HAU1 Y01 sing 441 n n 
CAU HAU2 Y01 sing 442 n n 
CAS HAS1 Y01 sing 443 n n 
CAS HAS2 Y01 sing 444 n n 
CBF HBF Y01 sing 445 n n 
CAK HAK1 Y01 sing 446 n n 
CAK HAK2 Y01 sing 447 n n 
CAI HAI Y01 sing 448 n n 
CAV HAV1 Y01 sing 449 n n 
CAV HAV2 Y01 sing 450 n n 
CBC HBC Y01 sing 451 n n 
CAD HAD1 Y01 sing 452 n n 
CAD HAD2 Y01 sing 453 n n 
CAD HAD3 Y01 sing 454 n n 
CAT HAT1 Y01 sing 455 n n 
CAT HAT2 Y01 sing 456 n n 
CAR HAR1 Y01 sing 457 n n 
CAR HAR2 Y01 sing 458 n n 
CAM HAM1 Y01 sing 459 n n 
CAM HAM2 Y01 sing 460 n n 
CAL HAL1 Y01 sing 461 n n 
CAL HAL2 Y01 sing 462 n n 
OAH HAH Y01 sing 463 n n 
#
_atom_sites.entry_id                     8QZ4 
_atom_sites.fract_transf_matrix[1][1]    0.014646 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013232 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003859 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 BA A 1 401 402 BA BA . 
F 3 BA A 1 402 403 BA BA . 
G 4 Y01 A 1 403 501 Y01 Y01 . 
H 4 Y01 A 1 404 502 Y01 Y01 . 
I 4 Y01 A 1 405 502 Y01 Y01 . 
J 3 BA B 1 401 401 BA BA . 
K 3 BA B 1 402 401 BA BA . 
L 4 Y01 B 1 403 501 Y01 Y01 . 
M 5 HOH A 1 501 1 HOH HOH . 
M 5 HOH A 2 502 5 HOH HOH . 
M 5 HOH A 3 503 4 HOH HOH . 
N 5 HOH B 1 501 8 HOH HOH . 
N 5 HOH B 2 502 2 HOH HOH . 
N 5 HOH B 3 503 3 HOH HOH . 
N 5 HOH B 4 504 6 HOH HOH . 
O 5 HOH C 1 201 7 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . L 4 37.672 1.437 305.25 1 93.73 ? CAA Y01 403 B 1 
HETATM 2 C CBA Y01 . . . L 4 37.124 1.658 306.645 1 93.8 ? CBA Y01 403 B 1 
HETATM 3 C CAB Y01 . . . L 4 36.143 2.815 306.652 1 93.77 ? CAB Y01 403 B 1 
HETATM 4 C CAN Y01 . . . L 4 36.546 0.375 307.236 1 93.97 ? CAN Y01 403 B 1 
HETATM 5 C CAJ Y01 . . . L 4 35.936 0.471 308.632 1 94.21 ? CAJ Y01 403 B 1 
HETATM 6 C CAO Y01 . . . L 4 36.568 -0.47 309.651 1 94.44 ? CAO Y01 403 B 1 
HETATM 7 C CBB Y01 . . . L 4 35.666 -1.625 310.132 1 94.65 ? CBB Y01 403 B 1 
HETATM 8 C CAC Y01 . . . L 4 35.792 -2.817 309.185 1 94.67 ? CAC Y01 403 B 1 
HETATM 9 C CBE Y01 . . . L 4 35.943 -1.967 311.612 1 94.85 ? CBE Y01 403 B 1 
HETATM 10 C CAP Y01 . . . L 4 35.871 -0.717 312.518 1 94.92 ? CAP Y01 403 B 1 
HETATM 11 C CAQ Y01 . . . L 4 35.476 -1.208 313.92 1 95.07 ? CAQ Y01 403 B 1 
HETATM 12 C CBG Y01 . . . L 4 35.518 -2.736 313.806 1 95.25 ? CBG Y01 403 B 1 
HETATM 13 C CBI Y01 . . . L 4 35.069 -3.013 312.351 1 95.1 ? CBI Y01 403 B 1 
HETATM 14 C CAE Y01 . . . L 4 33.568 -2.735 312.14 1 95.08 ? CAE Y01 403 B 1 
HETATM 15 C CAU Y01 . . . L 4 35.377 -4.498 312.077 1 95.29 ? CAU Y01 403 B 1 
HETATM 16 C CAS Y01 . . . L 4 34.733 -5.442 313.102 1 95.49 ? CAS Y01 403 B 1 
HETATM 17 C CBF Y01 . . . L 4 35.071 -5.083 314.562 1 95.68 ? CBF Y01 403 B 1 
HETATM 18 C CBD Y01 . . . L 4 34.814 -3.592 314.87 1 95.58 ? CBD Y01 403 B 1 
HETATM 19 C CAK Y01 . . . L 4 35.338 -3.246 316.263 1 95.77 ? CAK Y01 403 B 1 
HETATM 20 C CAI Y01 . . . L 4 35.032 -4.294 317.287 1 95.97 ? CAI Y01 403 B 1 
HETATM 21 C CAZ Y01 . . . L 4 34.646 -5.532 317.017 1 96.18 ? CAZ Y01 403 B 1 
HETATM 22 C CAV Y01 . . . L 4 34.381 -6.509 318.141 1 96.52 ? CAV Y01 403 B 1 
HETATM 23 C CBH Y01 . . . L 4 34.389 -6.035 315.594 1 96 ? CBH Y01 403 B 1 
HETATM 24 C CAD Y01 . . . L 4 32.862 -6.105 315.382 1 95.9 ? CAD Y01 403 B 1 
HETATM 25 C CAT Y01 . . . L 4 34.991 -7.448 315.427 1 96.28 ? CAT Y01 403 B 1 
HETATM 26 C CAR Y01 . . . L 4 34.654 -8.417 316.565 1 96.58 ? CAR Y01 403 B 1 
HETATM 27 C CBC Y01 . . . L 4 35.08 -7.829 317.89 1 96.86 ? CBC Y01 403 B 1 
HETATM 28 O OAW Y01 . . . L 4 34.768 -8.741 318.992 1 97.42 ? OAW Y01 403 B 1 
HETATM 29 C CAY Y01 . . . L 4 35.78 -9.451 319.525 1 97.85 ? CAY Y01 403 B 1 
HETATM 30 O OAG Y01 . . . L 4 36.834 -9.628 318.977 1 97.9 ? OAG Y01 403 B 1 
HETATM 31 C CAM Y01 . . . L 4 35.439 -9.935 320.905 1 98.13 ? CAM Y01 403 B 1 
HETATM 32 C CAL Y01 . . . L 4 36.292 -9.278 321.983 1 98.4 ? CAL Y01 403 B 1 
HETATM 33 C CAX Y01 . . . L 4 35.958 -9.698 323.386 1 98.61 ? CAX Y01 403 B 1 
HETATM 34 O OAH Y01 . . . L 4 34.767 -9.329 323.772 1 98.68 ? OAH Y01 403 B 1 
HETATM 35 O OAF Y01 . . . L 4 36.733 -10.301 324.105 1 98.62 ? OAF Y01 403 B 1 
#
_model_server_stats.io_time_ms              109 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           500 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           35 
#