data_8R0D
#
_model_server_result.job_id            DPf5SXFQoG7MtA6PbJjLaw 
_model_server_result.datetime_utc      '2024-12-26 11:20:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8r0d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":306}' 
#
_entry.id    8R0D 
#
_exptl.entry_id    8R0D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8R0D 
_cell.length_a            62.89 
_cell.length_b            85.52 
_cell.length_c            109.72 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8R0D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    'I 2 2' 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J 1 1 
A,B,C,D,E,F,G,H,I,J 1 2 
A,B,C,D,E,F,G,H,I,J 1 3 
A,B,C,D,E,F,G,H,I,J 1 4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 62.89 0 0 
3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 62.89 0 109.72 
4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 109.72 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8R0D 
_atom_sites.fract_transf_matrix[1][1]    0.015901 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011693 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009114 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 301 303 EDO EDO . 
C 2 EDO A 1 302 305 EDO EDO . 
D 2 EDO A 1 303 308 EDO EDO . 
E 2 EDO A 1 304 310 EDO EDO . 
F 2 EDO A 1 305 311 EDO EDO . 
G 2 EDO A 1 306 315 EDO EDO . 
H 2 EDO A 1 307 316 EDO EDO . 
I 3 FMT A 1 308 318 FMT FMT . 
J 4 HOH A 1 401 181 HOH HOH . 
J 4 HOH A 2 402 179 HOH HOH . 
J 4 HOH A 3 403 180 HOH HOH . 
J 4 HOH A 4 404 74 HOH HOH . 
J 4 HOH A 5 405 1 HOH HOH . 
J 4 HOH A 6 406 160 HOH HOH . 
J 4 HOH A 7 407 175 HOH HOH . 
J 4 HOH A 8 408 85 HOH HOH . 
J 4 HOH A 9 409 55 HOH HOH . 
J 4 HOH A 10 410 8 HOH HOH . 
J 4 HOH A 11 411 118 HOH HOH . 
J 4 HOH A 12 412 44 HOH HOH . 
J 4 HOH A 13 413 32 HOH HOH . 
J 4 HOH A 14 414 2 HOH HOH . 
J 4 HOH A 15 415 9 HOH HOH . 
J 4 HOH A 16 416 28 HOH HOH . 
J 4 HOH A 17 417 84 HOH HOH . 
J 4 HOH A 18 418 36 HOH HOH . 
J 4 HOH A 19 419 133 HOH HOH . 
J 4 HOH A 20 420 20 HOH HOH . 
J 4 HOH A 21 421 45 HOH HOH . 
J 4 HOH A 22 422 88 HOH HOH . 
J 4 HOH A 23 423 40 HOH HOH . 
J 4 HOH A 24 424 66 HOH HOH . 
J 4 HOH A 25 425 3 HOH HOH . 
J 4 HOH A 26 426 31 HOH HOH . 
J 4 HOH A 27 427 42 HOH HOH . 
J 4 HOH A 28 428 87 HOH HOH . 
J 4 HOH A 29 429 126 HOH HOH . 
J 4 HOH A 30 430 81 HOH HOH . 
J 4 HOH A 31 431 41 HOH HOH . 
J 4 HOH A 32 432 13 HOH HOH . 
J 4 HOH A 33 433 124 HOH HOH . 
J 4 HOH A 34 434 35 HOH HOH . 
J 4 HOH A 35 435 15 HOH HOH . 
J 4 HOH A 36 436 22 HOH HOH . 
J 4 HOH A 37 437 39 HOH HOH . 
J 4 HOH A 38 438 4 HOH HOH . 
J 4 HOH A 39 439 24 HOH HOH . 
J 4 HOH A 40 440 54 HOH HOH . 
J 4 HOH A 41 441 165 HOH HOH . 
J 4 HOH A 42 442 26 HOH HOH . 
J 4 HOH A 43 443 14 HOH HOH . 
J 4 HOH A 44 444 49 HOH HOH . 
J 4 HOH A 45 445 86 HOH HOH . 
J 4 HOH A 46 446 25 HOH HOH . 
J 4 HOH A 47 447 140 HOH HOH . 
J 4 HOH A 48 448 6 HOH HOH . 
J 4 HOH A 49 449 10 HOH HOH . 
J 4 HOH A 50 450 138 HOH HOH . 
J 4 HOH A 51 451 7 HOH HOH . 
J 4 HOH A 52 452 48 HOH HOH . 
J 4 HOH A 53 453 101 HOH HOH . 
J 4 HOH A 54 454 119 HOH HOH . 
J 4 HOH A 55 455 161 HOH HOH . 
J 4 HOH A 56 456 68 HOH HOH . 
J 4 HOH A 57 457 127 HOH HOH . 
J 4 HOH A 58 458 117 HOH HOH . 
J 4 HOH A 59 459 43 HOH HOH . 
J 4 HOH A 60 460 16 HOH HOH . 
J 4 HOH A 61 461 149 HOH HOH . 
J 4 HOH A 62 462 148 HOH HOH . 
J 4 HOH A 63 463 29 HOH HOH . 
J 4 HOH A 64 464 23 HOH HOH . 
J 4 HOH A 65 465 47 HOH HOH . 
J 4 HOH A 66 466 27 HOH HOH . 
J 4 HOH A 67 467 5 HOH HOH . 
J 4 HOH A 68 468 164 HOH HOH . 
J 4 HOH A 69 469 56 HOH HOH . 
J 4 HOH A 70 470 53 HOH HOH . 
J 4 HOH A 71 471 37 HOH HOH . 
J 4 HOH A 72 472 46 HOH HOH . 
J 4 HOH A 73 473 18 HOH HOH . 
J 4 HOH A 74 474 152 HOH HOH . 
J 4 HOH A 75 475 59 HOH HOH . 
J 4 HOH A 76 476 30 HOH HOH . 
J 4 HOH A 77 477 61 HOH HOH . 
J 4 HOH A 78 478 134 HOH HOH . 
J 4 HOH A 79 479 62 HOH HOH . 
J 4 HOH A 80 480 52 HOH HOH . 
J 4 HOH A 81 481 70 HOH HOH . 
J 4 HOH A 82 482 34 HOH HOH . 
J 4 HOH A 83 483 131 HOH HOH . 
J 4 HOH A 84 484 76 HOH HOH . 
J 4 HOH A 85 485 109 HOH HOH . 
J 4 HOH A 86 486 65 HOH HOH . 
J 4 HOH A 87 487 125 HOH HOH . 
J 4 HOH A 88 488 169 HOH HOH . 
J 4 HOH A 89 489 12 HOH HOH . 
J 4 HOH A 90 490 63 HOH HOH . 
J 4 HOH A 91 491 69 HOH HOH . 
J 4 HOH A 92 492 79 HOH HOH . 
J 4 HOH A 93 493 129 HOH HOH . 
J 4 HOH A 94 494 60 HOH HOH . 
J 4 HOH A 95 495 156 HOH HOH . 
J 4 HOH A 96 496 135 HOH HOH . 
J 4 HOH A 97 497 64 HOH HOH . 
J 4 HOH A 98 498 107 HOH HOH . 
J 4 HOH A 99 499 82 HOH HOH . 
J 4 HOH A 100 500 57 HOH HOH . 
J 4 HOH A 101 501 21 HOH HOH . 
J 4 HOH A 102 502 19 HOH HOH . 
J 4 HOH A 103 503 11 HOH HOH . 
J 4 HOH A 104 504 111 HOH HOH . 
J 4 HOH A 105 505 51 HOH HOH . 
J 4 HOH A 106 506 98 HOH HOH . 
J 4 HOH A 107 507 141 HOH HOH . 
J 4 HOH A 108 508 99 HOH HOH . 
J 4 HOH A 109 509 177 HOH HOH . 
J 4 HOH A 110 510 58 HOH HOH . 
J 4 HOH A 111 511 139 HOH HOH . 
J 4 HOH A 112 512 93 HOH HOH . 
J 4 HOH A 113 513 90 HOH HOH . 
J 4 HOH A 114 514 108 HOH HOH . 
J 4 HOH A 115 515 137 HOH HOH . 
J 4 HOH A 116 516 96 HOH HOH . 
J 4 HOH A 117 517 102 HOH HOH . 
J 4 HOH A 118 518 72 HOH HOH . 
J 4 HOH A 119 519 163 HOH HOH . 
J 4 HOH A 120 520 94 HOH HOH . 
J 4 HOH A 121 521 162 HOH HOH . 
J 4 HOH A 122 522 150 HOH HOH . 
J 4 HOH A 123 523 112 HOH HOH . 
J 4 HOH A 124 524 159 HOH HOH . 
J 4 HOH A 125 525 103 HOH HOH . 
J 4 HOH A 126 526 17 HOH HOH . 
J 4 HOH A 127 527 38 HOH HOH . 
J 4 HOH A 128 528 167 HOH HOH . 
J 4 HOH A 129 529 33 HOH HOH . 
J 4 HOH A 130 530 67 HOH HOH . 
J 4 HOH A 131 531 170 HOH HOH . 
J 4 HOH A 132 532 100 HOH HOH . 
J 4 HOH A 133 533 158 HOH HOH . 
J 4 HOH A 134 534 95 HOH HOH . 
J 4 HOH A 135 535 91 HOH HOH . 
J 4 HOH A 136 536 116 HOH HOH . 
J 4 HOH A 137 537 178 HOH HOH . 
J 4 HOH A 138 538 132 HOH HOH . 
J 4 HOH A 139 539 120 HOH HOH . 
J 4 HOH A 140 540 166 HOH HOH . 
J 4 HOH A 141 541 105 HOH HOH . 
J 4 HOH A 142 542 128 HOH HOH . 
J 4 HOH A 143 543 171 HOH HOH . 
J 4 HOH A 144 544 145 HOH HOH . 
J 4 HOH A 145 545 77 HOH HOH . 
J 4 HOH A 146 546 92 HOH HOH . 
J 4 HOH A 147 547 71 HOH HOH . 
J 4 HOH A 148 548 78 HOH HOH . 
J 4 HOH A 149 549 89 HOH HOH . 
J 4 HOH A 150 550 174 HOH HOH . 
J 4 HOH A 151 551 172 HOH HOH . 
J 4 HOH A 152 552 122 HOH HOH . 
J 4 HOH A 153 553 113 HOH HOH . 
J 4 HOH A 154 554 121 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . B . G 2 12.846 22.311 29.569 0.52 25.61 ? C1 EDO 306 A 1 
HETATM 2 O O1 EDO . B . G 2 12.902 22.08 28.157 0.52 26.21 ? O1 EDO 306 A 1 
HETATM 3 C C2 EDO . B . G 2 12.544 21.009 30.296 0.52 32.98 ? C2 EDO 306 A 1 
HETATM 4 O O2 EDO . B . G 2 13.29 20.945 31.525 0.52 44.72 ? O2 EDO 306 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           340 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#