data_8R0H # _model_server_result.job_id 1M52N9K7vSCGo03yAY0BhQ _model_server_result.datetime_utc '2024-11-20 01:30:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r0h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 8R0H # _exptl.entry_id 8R0H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 254.307 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(2-thiophen-2-ylethenyl)-1~{H}-quinoxalin-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8R0H _cell.length_a 98.304 _cell.length_b 98.304 _cell.length_c 80.339 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R0H _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall 'P 65' _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 261 A SER 260 1_555 A N SEP 262 A SEP 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C SEP 262 A SEP 261 1_555 A N GLU 263 A GLU 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C14 H10 N2 O S' _chem_comp.formula_weight 254.307 _chem_comp.id 8UB _chem_comp.mon_nstd_flag . _chem_comp.name 3-(2-thiophen-2-ylethenyl)-1~{H}-quinoxalin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 8UB sing 1 n n N1 C7 8UB doub 2 n n N1 C3 8UB sing 3 n n C2 C3 8UB doub 4 n y C2 C1 8UB sing 5 n y C7 C6 8UB sing 6 n n C3 C4 8UB sing 7 n y C1 C 8UB doub 8 n y C6 O 8UB doub 9 n n C6 N 8UB sing 10 n n C4 N 8UB sing 11 n n C4 C5 8UB doub 12 n y C C5 8UB sing 13 n y C5 H1 8UB sing 14 n n C8 H2 8UB sing 15 n n N H5 8UB sing 16 n n C H6 8UB sing 17 n n C2 H7 8UB sing 18 n n C1 H8 8UB sing 19 n n C8 C9 8UB doub 20 n n C9 C10 8UB sing 21 n n C10 C11 8UB doub 22 n y C11 C12 8UB sing 23 n y C12 C13 8UB doub 24 n y C10 S1 8UB sing 25 n y C9 H3 8UB sing 26 n n C11 H9 8UB sing 27 n n C12 H11 8UB sing 28 n n C13 H13 8UB sing 29 n n C13 S1 8UB sing 30 n y # _atom_sites.entry_id 8R0H _atom_sites.fract_transf_matrix[1][1] 0.010173 _atom_sites.fract_transf_matrix[1][2] 0.005873 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012447 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 401 1 GOL GOL . D 3 GOL A 1 402 2 GOL GOL . E 4 8UB A 1 403 1 8UB LHD . F 5 HOH A 1 501 189 HOH HOH . F 5 HOH A 2 502 142 HOH HOH . F 5 HOH A 3 503 256 HOH HOH . F 5 HOH A 4 504 225 HOH HOH . F 5 HOH A 5 505 134 HOH HOH . F 5 HOH A 6 506 119 HOH HOH . F 5 HOH A 7 507 252 HOH HOH . F 5 HOH A 8 508 196 HOH HOH . F 5 HOH A 9 509 120 HOH HOH . F 5 HOH A 10 510 226 HOH HOH . F 5 HOH A 11 511 101 HOH HOH . F 5 HOH A 12 512 12 HOH HOH . F 5 HOH A 13 513 66 HOH HOH . F 5 HOH A 14 514 71 HOH HOH . F 5 HOH A 15 515 108 HOH HOH . F 5 HOH A 16 516 82 HOH HOH . F 5 HOH A 17 517 173 HOH HOH . F 5 HOH A 18 518 122 HOH HOH . F 5 HOH A 19 519 94 HOH HOH . F 5 HOH A 20 520 65 HOH HOH . F 5 HOH A 21 521 24 HOH HOH . F 5 HOH A 22 522 114 HOH HOH . F 5 HOH A 23 523 131 HOH HOH . F 5 HOH A 24 524 90 HOH HOH . F 5 HOH A 25 525 113 HOH HOH . F 5 HOH A 26 526 146 HOH HOH . F 5 HOH A 27 527 54 HOH HOH . F 5 HOH A 28 528 48 HOH HOH . F 5 HOH A 29 529 6 HOH HOH . F 5 HOH A 30 530 129 HOH HOH . F 5 HOH A 31 531 74 HOH HOH . F 5 HOH A 32 532 30 HOH HOH . F 5 HOH A 33 533 73 HOH HOH . F 5 HOH A 34 534 169 HOH HOH . F 5 HOH A 35 535 143 HOH HOH . F 5 HOH A 36 536 43 HOH HOH . F 5 HOH A 37 537 105 HOH HOH . F 5 HOH A 38 538 2 HOH HOH . F 5 HOH A 39 539 92 HOH HOH . F 5 HOH A 40 540 58 HOH HOH . F 5 HOH A 41 541 161 HOH HOH . F 5 HOH A 42 542 25 HOH HOH . F 5 HOH A 43 543 45 HOH HOH . F 5 HOH A 44 544 99 HOH HOH . F 5 HOH A 45 545 204 HOH HOH . F 5 HOH A 46 546 32 HOH HOH . F 5 HOH A 47 547 33 HOH HOH . F 5 HOH A 48 548 76 HOH HOH . F 5 HOH A 49 549 36 HOH HOH . F 5 HOH A 50 550 79 HOH HOH . F 5 HOH A 51 551 84 HOH HOH . F 5 HOH A 52 552 89 HOH HOH . F 5 HOH A 53 553 27 HOH HOH . F 5 HOH A 54 554 40 HOH HOH . F 5 HOH A 55 555 93 HOH HOH . F 5 HOH A 56 556 150 HOH HOH . F 5 HOH A 57 557 154 HOH HOH . F 5 HOH A 58 558 109 HOH HOH . F 5 HOH A 59 559 183 HOH HOH . F 5 HOH A 60 560 3 HOH HOH . F 5 HOH A 61 561 22 HOH HOH . F 5 HOH A 62 562 218 HOH HOH . F 5 HOH A 63 563 191 HOH HOH . F 5 HOH A 64 564 8 HOH HOH . F 5 HOH A 65 565 13 HOH HOH . F 5 HOH A 66 566 44 HOH HOH . F 5 HOH A 67 567 227 HOH HOH . F 5 HOH A 68 568 164 HOH HOH . F 5 HOH A 69 569 5 HOH HOH . F 5 HOH A 70 570 26 HOH HOH . F 5 HOH A 71 571 31 HOH HOH . F 5 HOH A 72 572 236 HOH HOH . F 5 HOH A 73 573 15 HOH HOH . F 5 HOH A 74 574 104 HOH HOH . F 5 HOH A 75 575 38 HOH HOH . F 5 HOH A 76 576 51 HOH HOH . F 5 HOH A 77 577 11 HOH HOH . F 5 HOH A 78 578 222 HOH HOH . F 5 HOH A 79 579 229 HOH HOH . F 5 HOH A 80 580 49 HOH HOH . F 5 HOH A 81 581 141 HOH HOH . F 5 HOH A 82 582 151 HOH HOH . F 5 HOH A 83 583 137 HOH HOH . F 5 HOH A 84 584 221 HOH HOH . F 5 HOH A 85 585 1 HOH HOH . F 5 HOH A 86 586 107 HOH HOH . F 5 HOH A 87 587 118 HOH HOH . F 5 HOH A 88 588 124 HOH HOH . F 5 HOH A 89 589 133 HOH HOH . F 5 HOH A 90 590 159 HOH HOH . F 5 HOH A 91 591 156 HOH HOH . F 5 HOH A 92 592 4 HOH HOH . F 5 HOH A 93 593 14 HOH HOH . F 5 HOH A 94 594 123 HOH HOH . F 5 HOH A 95 595 181 HOH HOH . F 5 HOH A 96 596 69 HOH HOH . F 5 HOH A 97 597 21 HOH HOH . F 5 HOH A 98 598 166 HOH HOH . F 5 HOH A 99 599 194 HOH HOH . F 5 HOH A 100 600 188 HOH HOH . F 5 HOH A 101 601 19 HOH HOH . F 5 HOH A 102 602 110 HOH HOH . F 5 HOH A 103 603 135 HOH HOH . F 5 HOH A 104 604 140 HOH HOH . F 5 HOH A 105 605 80 HOH HOH . F 5 HOH A 106 606 228 HOH HOH . F 5 HOH A 107 607 215 HOH HOH . F 5 HOH A 108 608 63 HOH HOH . F 5 HOH A 109 609 145 HOH HOH . F 5 HOH A 110 610 100 HOH HOH . F 5 HOH A 111 611 206 HOH HOH . F 5 HOH A 112 612 17 HOH HOH . F 5 HOH A 113 613 78 HOH HOH . F 5 HOH A 114 614 112 HOH HOH . F 5 HOH A 115 615 7 HOH HOH . F 5 HOH A 116 616 64 HOH HOH . F 5 HOH A 117 617 28 HOH HOH . F 5 HOH A 118 618 83 HOH HOH . F 5 HOH A 119 619 230 HOH HOH . F 5 HOH A 120 620 178 HOH HOH . F 5 HOH A 121 621 251 HOH HOH . F 5 HOH A 122 622 55 HOH HOH . F 5 HOH A 123 623 111 HOH HOH . F 5 HOH A 124 624 57 HOH HOH . F 5 HOH A 125 625 160 HOH HOH . F 5 HOH A 126 626 72 HOH HOH . F 5 HOH A 127 627 174 HOH HOH . F 5 HOH A 128 628 153 HOH HOH . F 5 HOH A 129 629 177 HOH HOH . F 5 HOH A 130 630 85 HOH HOH . F 5 HOH A 131 631 86 HOH HOH . F 5 HOH A 132 632 53 HOH HOH . F 5 HOH A 133 633 149 HOH HOH . F 5 HOH A 134 634 20 HOH HOH . F 5 HOH A 135 635 91 HOH HOH . F 5 HOH A 136 636 197 HOH HOH . F 5 HOH A 137 637 136 HOH HOH . F 5 HOH A 138 638 52 HOH HOH . F 5 HOH A 139 639 75 HOH HOH . F 5 HOH A 140 640 62 HOH HOH . F 5 HOH A 141 641 216 HOH HOH . F 5 HOH A 142 642 203 HOH HOH . F 5 HOH A 143 643 172 HOH HOH . F 5 HOH A 144 644 147 HOH HOH . F 5 HOH A 145 645 68 HOH HOH . F 5 HOH A 146 646 9 HOH HOH . F 5 HOH A 147 647 219 HOH HOH . F 5 HOH A 148 648 126 HOH HOH . F 5 HOH A 149 649 39 HOH HOH . F 5 HOH A 150 650 37 HOH HOH . F 5 HOH A 151 651 106 HOH HOH . F 5 HOH A 152 652 98 HOH HOH . F 5 HOH A 153 653 117 HOH HOH . F 5 HOH A 154 654 67 HOH HOH . F 5 HOH A 155 655 10 HOH HOH . F 5 HOH A 156 656 60 HOH HOH . F 5 HOH A 157 657 18 HOH HOH . F 5 HOH A 158 658 220 HOH HOH . F 5 HOH A 159 659 116 HOH HOH . F 5 HOH A 160 660 81 HOH HOH . F 5 HOH A 161 661 87 HOH HOH . F 5 HOH A 162 662 35 HOH HOH . F 5 HOH A 163 663 253 HOH HOH . F 5 HOH A 164 664 163 HOH HOH . F 5 HOH A 165 665 254 HOH HOH . F 5 HOH A 166 666 42 HOH HOH . F 5 HOH A 167 667 210 HOH HOH . F 5 HOH A 168 668 102 HOH HOH . F 5 HOH A 169 669 214 HOH HOH . F 5 HOH A 170 670 207 HOH HOH . F 5 HOH A 171 671 187 HOH HOH . F 5 HOH A 172 672 231 HOH HOH . F 5 HOH A 173 673 250 HOH HOH . F 5 HOH A 174 674 70 HOH HOH . F 5 HOH A 175 675 247 HOH HOH . F 5 HOH A 176 676 59 HOH HOH . F 5 HOH A 177 677 239 HOH HOH . F 5 HOH A 178 678 61 HOH HOH . F 5 HOH A 179 679 185 HOH HOH . F 5 HOH A 180 680 213 HOH HOH . F 5 HOH A 181 681 223 HOH HOH . F 5 HOH A 182 682 121 HOH HOH . F 5 HOH A 183 683 246 HOH HOH . F 5 HOH A 184 684 237 HOH HOH . F 5 HOH A 185 685 235 HOH HOH . F 5 HOH A 186 686 255 HOH HOH . F 5 HOH A 187 687 179 HOH HOH . F 5 HOH A 188 688 115 HOH HOH . F 5 HOH A 189 689 88 HOH HOH . F 5 HOH A 190 690 217 HOH HOH . F 5 HOH A 191 691 77 HOH HOH . F 5 HOH A 192 692 212 HOH HOH . F 5 HOH A 193 693 23 HOH HOH . F 5 HOH A 194 694 168 HOH HOH . F 5 HOH A 195 695 180 HOH HOH . F 5 HOH A 196 696 243 HOH HOH . F 5 HOH A 197 697 184 HOH HOH . F 5 HOH A 198 698 170 HOH HOH . F 5 HOH A 199 699 46 HOH HOH . F 5 HOH A 200 700 205 HOH HOH . F 5 HOH A 201 701 245 HOH HOH . G 5 HOH B 1 101 56 HOH HOH . G 5 HOH B 2 102 195 HOH HOH . G 5 HOH B 3 103 41 HOH HOH . G 5 HOH B 4 104 175 HOH HOH . G 5 HOH B 5 105 242 HOH HOH . G 5 HOH B 6 106 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 8UB . . . E 4 137.917 -1.913 -0.179 0.93 31.73 ? C4 8UB 403 A 1 HETATM 2 C C5 8UB . . . E 4 137.075 -1.919 -1.284 0.93 35.98 ? C5 8UB 403 A 1 HETATM 3 C C6 8UB . . . E 4 138.248 -2.35 2.188 0.93 34.04 ? C6 8UB 403 A 1 HETATM 4 N N1 8UB . . . E 4 140.102 -1.464 0.784 0.93 34.73 ? N1 8UB 403 A 1 HETATM 5 C C7 8UB . . . E 4 139.676 -1.906 1.942 0.93 35.41 ? C7 8UB 403 A 1 HETATM 6 C C8 8UB . . . E 4 140.602 -2.007 3.007 0.93 33.23 ? C8 8UB 403 A 1 HETATM 7 O O 8UB . . . E 4 137.811 -2.697 3.282 0.93 35.4 ? O 8UB 403 A 1 HETATM 8 N N 8UB . . . E 4 137.478 -2.338 1.074 0.93 32.52 ? N 8UB 403 A 1 HETATM 9 C C 8UB . . . E 4 137.537 -1.421 -2.493 0.93 36.5 ? C 8UB 403 A 1 HETATM 10 C C3 8UB . . . E 4 139.233 -1.443 -0.288 0.93 32.22 ? C3 8UB 403 A 1 HETATM 11 C C2 8UB . . . E 4 139.675 -0.933 -1.512 0.93 31.59 ? C2 8UB 403 A 1 HETATM 12 C C1 8UB . . . E 4 138.82 -0.92 -2.601 0.93 31.22 ? C1 8UB 403 A 1 HETATM 13 C C9 8UB . . . E 4 141.917 -1.834 3.035 0.93 32.42 ? C9 8UB 403 A 1 HETATM 14 C C10 8UB . . . E 4 143.04 -1.53 2.176 0.93 33.35 ? C10 8UB 403 A 1 HETATM 15 C C11 8UB . . . E 4 144.359 -1.606 2.549 0.93 33.69 ? C11 8UB 403 A 1 HETATM 16 C C12 8UB . . . E 4 145.23 -1.343 1.457 0.93 39.04 ? C12 8UB 403 A 1 HETATM 17 C C13 8UB . . . E 4 144.567 -1.051 0.316 0.93 36.11 ? C13 8UB 403 A 1 HETATM 18 S S1 8UB . . . E 4 142.885 -1.088 0.512 0.93 40.4 ? S1 8UB 403 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 18 #