data_8R0I # _model_server_result.job_id f2CGrFVFlS58b88kZp3tFA _model_server_result.datetime_utc '2024-11-29 21:16:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r0i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 8R0I # _exptl.entry_id 8R0I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8R0I _cell.length_a 101.018 _cell.length_b 103.667 _cell.length_c 141.315 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R0I _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,M 1 1,3 B,G,H,I,J,K,L,N 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_654 -x+1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 101.018 0 -70.6575 3 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 92 n n C1 C2 EDO sing 93 n n C1 H11 EDO sing 94 n n C1 H12 EDO sing 95 n n O1 HO1 EDO sing 96 n n C2 O2 EDO sing 97 n n C2 H21 EDO sing 98 n n C2 H22 EDO sing 99 n n O2 HO2 EDO sing 100 n n # _atom_sites.entry_id 8R0I _atom_sites.fract_transf_matrix[1][1] 0.009899 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009646 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007076 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMT A 1 501 503 FMT FMT . D 3 XG7 A 1 502 504 XG7 DRG . E 2 FMT A 1 503 505 FMT FMT . F 4 EDO A 1 504 506 EDO EDO . G 2 FMT B 1 501 503 FMT FMT . H 2 FMT B 1 502 504 FMT FMT . I 2 FMT B 1 503 505 FMT FMT . J 3 XG7 B 1 504 506 XG7 DRG . K 2 FMT B 1 505 507 FMT FMT . L 5 DMS B 1 506 508 DMS DMS . M 6 HOH A 1 601 56 HOH HOH . M 6 HOH A 2 602 179 HOH HOH . M 6 HOH A 3 603 210 HOH HOH . M 6 HOH A 4 604 106 HOH HOH . M 6 HOH A 5 605 97 HOH HOH . M 6 HOH A 6 606 177 HOH HOH . M 6 HOH A 7 607 142 HOH HOH . M 6 HOH A 8 608 47 HOH HOH . M 6 HOH A 9 609 143 HOH HOH . M 6 HOH A 10 610 76 HOH HOH . M 6 HOH A 11 611 65 HOH HOH . M 6 HOH A 12 612 158 HOH HOH . M 6 HOH A 13 613 240 HOH HOH . M 6 HOH A 14 614 253 HOH HOH . M 6 HOH A 15 615 198 HOH HOH . M 6 HOH A 16 616 213 HOH HOH . M 6 HOH A 17 617 17 HOH HOH . M 6 HOH A 18 618 27 HOH HOH . M 6 HOH A 19 619 203 HOH HOH . M 6 HOH A 20 620 168 HOH HOH . M 6 HOH A 21 621 145 HOH HOH . M 6 HOH A 22 622 202 HOH HOH . M 6 HOH A 23 623 60 HOH HOH . M 6 HOH A 24 624 61 HOH HOH . M 6 HOH A 25 625 71 HOH HOH . M 6 HOH A 26 626 209 HOH HOH . M 6 HOH A 27 627 80 HOH HOH . M 6 HOH A 28 628 236 HOH HOH . M 6 HOH A 29 629 125 HOH HOH . M 6 HOH A 30 630 43 HOH HOH . M 6 HOH A 31 631 102 HOH HOH . M 6 HOH A 32 632 40 HOH HOH . M 6 HOH A 33 633 140 HOH HOH . M 6 HOH A 34 634 41 HOH HOH . M 6 HOH A 35 635 92 HOH HOH . M 6 HOH A 36 636 29 HOH HOH . M 6 HOH A 37 637 44 HOH HOH . M 6 HOH A 38 638 20 HOH HOH . M 6 HOH A 39 639 3 HOH HOH . M 6 HOH A 40 640 6 HOH HOH . M 6 HOH A 41 641 59 HOH HOH . M 6 HOH A 42 642 22 HOH HOH . M 6 HOH A 43 643 84 HOH HOH . M 6 HOH A 44 644 263 HOH HOH . M 6 HOH A 45 645 16 HOH HOH . M 6 HOH A 46 646 52 HOH HOH . M 6 HOH A 47 647 206 HOH HOH . M 6 HOH A 48 648 214 HOH HOH . M 6 HOH A 49 649 129 HOH HOH . M 6 HOH A 50 650 63 HOH HOH . M 6 HOH A 51 651 7 HOH HOH . M 6 HOH A 52 652 166 HOH HOH . M 6 HOH A 53 653 221 HOH HOH . M 6 HOH A 54 654 33 HOH HOH . M 6 HOH A 55 655 276 HOH HOH . M 6 HOH A 56 656 88 HOH HOH . M 6 HOH A 57 657 25 HOH HOH . M 6 HOH A 58 658 199 HOH HOH . M 6 HOH A 59 659 89 HOH HOH . M 6 HOH A 60 660 169 HOH HOH . M 6 HOH A 61 661 5 HOH HOH . M 6 HOH A 62 662 164 HOH HOH . M 6 HOH A 63 663 107 HOH HOH . M 6 HOH A 64 664 234 HOH HOH . M 6 HOH A 65 665 10 HOH HOH . M 6 HOH A 66 666 175 HOH HOH . M 6 HOH A 67 667 157 HOH HOH . M 6 HOH A 68 668 64 HOH HOH . M 6 HOH A 69 669 268 HOH HOH . M 6 HOH A 70 670 246 HOH HOH . M 6 HOH A 71 671 280 HOH HOH . M 6 HOH A 72 672 156 HOH HOH . M 6 HOH A 73 673 219 HOH HOH . M 6 HOH A 74 674 67 HOH HOH . M 6 HOH A 75 675 8 HOH HOH . M 6 HOH A 76 676 167 HOH HOH . M 6 HOH A 77 677 162 HOH HOH . M 6 HOH A 78 678 216 HOH HOH . M 6 HOH A 79 679 134 HOH HOH . M 6 HOH A 80 680 138 HOH HOH . M 6 HOH A 81 681 132 HOH HOH . M 6 HOH A 82 682 57 HOH HOH . M 6 HOH A 83 683 23 HOH HOH . M 6 HOH A 84 684 131 HOH HOH . M 6 HOH A 85 685 19 HOH HOH . M 6 HOH A 86 686 32 HOH HOH . M 6 HOH A 87 687 149 HOH HOH . M 6 HOH A 88 688 170 HOH HOH . M 6 HOH A 89 689 239 HOH HOH . M 6 HOH A 90 690 171 HOH HOH . M 6 HOH A 91 691 62 HOH HOH . M 6 HOH A 92 692 113 HOH HOH . M 6 HOH A 93 693 86 HOH HOH . M 6 HOH A 94 694 77 HOH HOH . M 6 HOH A 95 695 94 HOH HOH . M 6 HOH A 96 696 262 HOH HOH . M 6 HOH A 97 697 38 HOH HOH . M 6 HOH A 98 698 49 HOH HOH . M 6 HOH A 99 699 212 HOH HOH . M 6 HOH A 100 700 50 HOH HOH . M 6 HOH A 101 701 87 HOH HOH . M 6 HOH A 102 702 223 HOH HOH . M 6 HOH A 103 703 79 HOH HOH . M 6 HOH A 104 704 53 HOH HOH . M 6 HOH A 105 705 279 HOH HOH . M 6 HOH A 106 706 176 HOH HOH . M 6 HOH A 107 707 1 HOH HOH . M 6 HOH A 108 708 46 HOH HOH . M 6 HOH A 109 709 215 HOH HOH . M 6 HOH A 110 710 117 HOH HOH . M 6 HOH A 111 711 101 HOH HOH . M 6 HOH A 112 712 135 HOH HOH . M 6 HOH A 113 713 225 HOH HOH . M 6 HOH A 114 714 128 HOH HOH . M 6 HOH A 115 715 119 HOH HOH . M 6 HOH A 116 716 271 HOH HOH . M 6 HOH A 117 717 237 HOH HOH . M 6 HOH A 118 718 222 HOH HOH . M 6 HOH A 119 719 165 HOH HOH . M 6 HOH A 120 720 75 HOH HOH . M 6 HOH A 121 721 173 HOH HOH . M 6 HOH A 122 722 244 HOH HOH . M 6 HOH A 123 723 228 HOH HOH . M 6 HOH A 124 724 207 HOH HOH . M 6 HOH A 125 725 133 HOH HOH . M 6 HOH A 126 726 201 HOH HOH . M 6 HOH A 127 727 251 HOH HOH . M 6 HOH A 128 728 163 HOH HOH . M 6 HOH A 129 729 200 HOH HOH . M 6 HOH A 130 730 217 HOH HOH . M 6 HOH A 131 731 273 HOH HOH . M 6 HOH A 132 732 204 HOH HOH . M 6 HOH A 133 733 83 HOH HOH . M 6 HOH A 134 734 281 HOH HOH . M 6 HOH A 135 735 250 HOH HOH . M 6 HOH A 136 736 172 HOH HOH . M 6 HOH A 137 737 139 HOH HOH . M 6 HOH A 138 738 112 HOH HOH . M 6 HOH A 139 739 148 HOH HOH . M 6 HOH A 140 740 232 HOH HOH . M 6 HOH A 141 741 197 HOH HOH . M 6 HOH A 142 742 205 HOH HOH . M 6 HOH A 143 743 178 HOH HOH . M 6 HOH A 144 744 151 HOH HOH . M 6 HOH A 145 745 161 HOH HOH . M 6 HOH A 146 746 174 HOH HOH . M 6 HOH A 147 747 226 HOH HOH . M 6 HOH A 148 748 211 HOH HOH . M 6 HOH A 149 749 255 HOH HOH . M 6 HOH A 150 750 155 HOH HOH . M 6 HOH A 151 751 100 HOH HOH . M 6 HOH A 152 752 208 HOH HOH . M 6 HOH A 153 753 90 HOH HOH . M 6 HOH A 154 754 224 HOH HOH . M 6 HOH A 155 755 144 HOH HOH . M 6 HOH A 156 756 227 HOH HOH . M 6 HOH A 157 757 218 HOH HOH . N 6 HOH B 1 601 188 HOH HOH . N 6 HOH B 2 602 192 HOH HOH . N 6 HOH B 3 603 187 HOH HOH . N 6 HOH B 4 604 55 HOH HOH . N 6 HOH B 5 605 70 HOH HOH . N 6 HOH B 6 606 254 HOH HOH . N 6 HOH B 7 607 191 HOH HOH . N 6 HOH B 8 608 264 HOH HOH . N 6 HOH B 9 609 48 HOH HOH . N 6 HOH B 10 610 35 HOH HOH . N 6 HOH B 11 611 39 HOH HOH . N 6 HOH B 12 612 26 HOH HOH . N 6 HOH B 13 613 185 HOH HOH . N 6 HOH B 14 614 278 HOH HOH . N 6 HOH B 15 615 238 HOH HOH . N 6 HOH B 16 616 85 HOH HOH . N 6 HOH B 17 617 73 HOH HOH . N 6 HOH B 18 618 31 HOH HOH . N 6 HOH B 19 619 111 HOH HOH . N 6 HOH B 20 620 241 HOH HOH . N 6 HOH B 21 621 186 HOH HOH . N 6 HOH B 22 622 18 HOH HOH . N 6 HOH B 23 623 122 HOH HOH . N 6 HOH B 24 624 36 HOH HOH . N 6 HOH B 25 625 72 HOH HOH . N 6 HOH B 26 626 195 HOH HOH . N 6 HOH B 27 627 93 HOH HOH . N 6 HOH B 28 628 13 HOH HOH . N 6 HOH B 29 629 37 HOH HOH . N 6 HOH B 30 630 109 HOH HOH . N 6 HOH B 31 631 265 HOH HOH . N 6 HOH B 32 632 99 HOH HOH . N 6 HOH B 33 633 247 HOH HOH . N 6 HOH B 34 634 104 HOH HOH . N 6 HOH B 35 635 189 HOH HOH . N 6 HOH B 36 636 126 HOH HOH . N 6 HOH B 37 637 150 HOH HOH . N 6 HOH B 38 638 30 HOH HOH . N 6 HOH B 39 639 141 HOH HOH . N 6 HOH B 40 640 108 HOH HOH . N 6 HOH B 41 641 153 HOH HOH . N 6 HOH B 42 642 4 HOH HOH . N 6 HOH B 43 643 105 HOH HOH . N 6 HOH B 44 644 152 HOH HOH . N 6 HOH B 45 645 127 HOH HOH . N 6 HOH B 46 646 54 HOH HOH . N 6 HOH B 47 647 96 HOH HOH . N 6 HOH B 48 648 42 HOH HOH . N 6 HOH B 49 649 14 HOH HOH . N 6 HOH B 50 650 248 HOH HOH . N 6 HOH B 51 651 12 HOH HOH . N 6 HOH B 52 652 136 HOH HOH . N 6 HOH B 53 653 78 HOH HOH . N 6 HOH B 54 654 115 HOH HOH . N 6 HOH B 55 655 15 HOH HOH . N 6 HOH B 56 656 74 HOH HOH . N 6 HOH B 57 657 233 HOH HOH . N 6 HOH B 58 658 182 HOH HOH . N 6 HOH B 59 659 103 HOH HOH . N 6 HOH B 60 660 82 HOH HOH . N 6 HOH B 61 661 51 HOH HOH . N 6 HOH B 62 662 160 HOH HOH . N 6 HOH B 63 663 9 HOH HOH . N 6 HOH B 64 664 180 HOH HOH . N 6 HOH B 65 665 190 HOH HOH . N 6 HOH B 66 666 91 HOH HOH . N 6 HOH B 67 667 24 HOH HOH . N 6 HOH B 68 668 196 HOH HOH . N 6 HOH B 69 669 235 HOH HOH . N 6 HOH B 70 670 243 HOH HOH . N 6 HOH B 71 671 194 HOH HOH . N 6 HOH B 72 672 45 HOH HOH . N 6 HOH B 73 673 66 HOH HOH . N 6 HOH B 74 674 34 HOH HOH . N 6 HOH B 75 675 118 HOH HOH . N 6 HOH B 76 676 245 HOH HOH . N 6 HOH B 77 677 58 HOH HOH . N 6 HOH B 78 678 120 HOH HOH . N 6 HOH B 79 679 269 HOH HOH . N 6 HOH B 80 680 137 HOH HOH . N 6 HOH B 81 681 2 HOH HOH . N 6 HOH B 82 682 121 HOH HOH . N 6 HOH B 83 683 28 HOH HOH . N 6 HOH B 84 684 184 HOH HOH . N 6 HOH B 85 685 146 HOH HOH . N 6 HOH B 86 686 124 HOH HOH . N 6 HOH B 87 687 116 HOH HOH . N 6 HOH B 88 688 81 HOH HOH . N 6 HOH B 89 689 181 HOH HOH . N 6 HOH B 90 690 95 HOH HOH . N 6 HOH B 91 691 277 HOH HOH . N 6 HOH B 92 692 159 HOH HOH . N 6 HOH B 93 693 242 HOH HOH . N 6 HOH B 94 694 154 HOH HOH . N 6 HOH B 95 695 147 HOH HOH . N 6 HOH B 96 696 11 HOH HOH . N 6 HOH B 97 697 69 HOH HOH . N 6 HOH B 98 698 98 HOH HOH . N 6 HOH B 99 699 130 HOH HOH . N 6 HOH B 100 700 183 HOH HOH . N 6 HOH B 101 701 231 HOH HOH . N 6 HOH B 102 702 114 HOH HOH . N 6 HOH B 103 703 275 HOH HOH . N 6 HOH B 104 704 274 HOH HOH . N 6 HOH B 105 705 230 HOH HOH . N 6 HOH B 106 706 270 HOH HOH . N 6 HOH B 107 707 252 HOH HOH . N 6 HOH B 108 708 267 HOH HOH . N 6 HOH B 109 709 272 HOH HOH . N 6 HOH B 110 710 260 HOH HOH . N 6 HOH B 111 711 257 HOH HOH . N 6 HOH B 112 712 259 HOH HOH . N 6 HOH B 113 713 256 HOH HOH . N 6 HOH B 114 714 261 HOH HOH . N 6 HOH B 115 715 266 HOH HOH . N 6 HOH B 116 716 258 HOH HOH . N 6 HOH B 117 717 249 HOH HOH . N 6 HOH B 118 718 229 HOH HOH . N 6 HOH B 119 719 220 HOH HOH . N 6 HOH B 120 720 193 HOH HOH . N 6 HOH B 121 721 110 HOH HOH . N 6 HOH B 122 722 123 HOH HOH . N 6 HOH B 123 723 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 -11.461 8.457 -0.709 1 23.38 0 C1 EDO 504 A 1 HETATM 2 O O1 EDO . . . F 4 -11.606 7.083 -0.949 1 35.36 0 O1 EDO 504 A 1 HETATM 3 C C2 EDO . . . F 4 -11.567 9.073 -2.006 1 34.48 0 C2 EDO 504 A 1 HETATM 4 O O2 EDO . . . F 4 -12.984 9.261 -2.11 1 40.05 0 O2 EDO 504 A 1 HETATM 5 H H11 EDO . . . F 4 -10.592 8.642 -0.323 1 28.18 0 H11 EDO 504 A 1 HETATM 6 H H12 EDO . . . F 4 -12.164 8.779 -0.104 1 28.3 0 H12 EDO 504 A 1 HETATM 7 H HO1 EDO . . . F 4 -11.479 6.61 -0.19 0 20 0 HO1 EDO 504 A 1 HETATM 8 H H21 EDO . . . F 4 -11.232 8.485 -2.716 1 32.6 0 H21 EDO 504 A 1 HETATM 9 H H22 EDO . . . F 4 -11.1 9.931 -2.027 1 32.58 0 H22 EDO 504 A 1 HETATM 10 H HO2 EDO . . . F 4 -13.337 8.552 -2.447 1 38.05 0 HO2 EDO 504 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #