data_8R2I # _model_server_result.job_id K2ge9RsA4e2NNJYyP2gKNg _model_server_result.datetime_utc '2024-10-20 01:31:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8r2i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":401}' # _entry.id 8R2I # _exptl.entry_id 8R2I _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 55.845 _entity.id 12 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8R2I _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8R2I _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details undecameric _pdbx_struct_assembly.oligomeric_count 11 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 12 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 L FE FE2 . A FE2 401 1_555 D NE2 HIS 212 D HIS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? metalc ? metalc2 L FE FE2 . A FE2 401 1_555 D NE2 HIS 266 D HIS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc3 L FE FE2 . A FE2 401 1_555 IB O3 BCT . D BCT 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc4 N MG CLA . A CLA 403 1_555 RB O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc5 S MG CLA . B CLA 501 1_555 SB O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc6 BA MG CLA . B CLA 510 1_555 SB O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc7 C OD1 ASN 7 C ASN 27 1_555 YA MG CLA . C CLA 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc8 UA MG CLA . C CLA 507 1_555 TB O HOH . C HOH 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc9 GB MG CLA . D CLA 401 1_555 UB O HOH . D HOH 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc10 E NE2 HIS 17 E HIS 23 1_555 OB FE HEM . E HEM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc11 OB FE HEM . E HEM 101 1_555 F NE2 HIS 12 F HIS 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8R2I _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 12 FE2 A 1 401 402 FE2 FE2 . M 13 CLA A 1 402 405 CLA CLA . N 13 CLA A 1 403 407 CLA CLA . O 14 PHO A 1 404 408 PHO PHO . P 13 CLA A 1 405 410 CLA CLA . Q 15 BCR A 1 406 411 BCR BCR . R 16 BOG A 1 407 412 BOG BOG . S 13 CLA B 1 501 602 CLA CLA . T 13 CLA B 1 502 603 CLA CLA . U 13 CLA B 1 503 604 CLA CLA . V 13 CLA B 1 504 605 CLA CLA . W 13 CLA B 1 505 606 CLA CLA . X 13 CLA B 1 506 607 CLA CLA . Y 13 CLA B 1 507 608 CLA CLA . Z 13 CLA B 1 508 609 CLA CLA . AA 13 CLA B 1 509 610 CLA CLA . BA 13 CLA B 1 510 611 CLA CLA . CA 13 CLA B 1 511 612 CLA CLA . DA 13 CLA B 1 512 613 CLA CLA . EA 13 CLA B 1 513 614 CLA CLA . FA 13 CLA B 1 514 615 CLA CLA . GA 13 CLA B 1 515 616 CLA CLA . HA 13 CLA B 1 516 617 CLA CLA . IA 15 BCR B 1 517 619 BCR BCR . JA 15 BCR B 1 518 620 BCR BCR . KA 17 LMG B 1 519 622 LMG LMG . LA 18 LMT B 1 520 623 LMT LMT . MA 18 LMT B 1 521 624 LMT LMT . NA 19 LHG B 1 522 408 LHG LHG . OA 13 CLA C 1 501 501 CLA CLA . PA 13 CLA C 1 502 502 CLA CLA . QA 13 CLA C 1 503 503 CLA CLA . RA 13 CLA C 1 504 504 CLA CLA . SA 13 CLA C 1 505 505 CLA CLA . TA 13 CLA C 1 506 506 CLA CLA . UA 13 CLA C 1 507 507 CLA CLA . VA 13 CLA C 1 508 508 CLA CLA . WA 13 CLA C 1 509 509 CLA CLA . XA 13 CLA C 1 510 510 CLA CLA . YA 13 CLA C 1 511 511 CLA CLA . ZA 13 CLA C 1 512 512 CLA CLA . AB 13 CLA C 1 513 513 CLA CLA . BB 15 BCR C 1 514 514 BCR BCR . CB 15 BCR C 1 515 515 BCR BCR . DB 15 BCR C 1 516 517 BCR BCR . EB 20 DGD C 1 517 518 DGD DGD . FB 16 BOG C 1 518 519 BOG BOG . GB 13 CLA D 1 401 406 CLA CLA . HB 14 PHO D 1 402 409 PHO PHO . IB 21 BCT D 1 403 401 BCT BCT . JB 13 CLA D 1 404 402 CLA CLA . KB 13 CLA D 1 405 403 CLA CLA . LB 15 BCR D 1 406 404 BCR BCR . MB 22 PL9 D 1 407 405 PL9 PL9 . NB 16 BOG D 1 408 409 BOG BOG . OB 23 HEM E 1 101 101 HEM HEM . PB 15 BCR H 1 101 101 BCR BCR . QB 17 LMG H 1 102 102 LMG LMG . RB 24 HOH A 1 501 6002 HOH HOH . SB 24 HOH B 1 601 6002 HOH HOH . SB 24 HOH B 2 602 6001 HOH HOH . TB 24 HOH C 1 6001 6001 HOH HOH . UB 24 HOH D 1 6001 6001 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 12 _atom_site.Cartn_x 125.222 _atom_site.Cartn_y 131.287 _atom_site.Cartn_z 132.597 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.98 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #