data_8R2I
#
_model_server_result.job_id            bHqexxy4L3lL9MpUl5p_GQ 
_model_server_result.datetime_utc      '2024-10-20 01:31:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8r2i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":407}' 
#
_entry.id    8R2I 
#
_exptl.entry_id    8R2I 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              292.369 
_entity.id                          16 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8R2I 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8R2I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    undecameric 
_pdbx_struct_assembly.oligomeric_count      11 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 16 R N N 
? 16 FB N N 
? 16 NB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 L FE FE2 . A FE2 401 1_555 D NE2 HIS 212 D HIS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? 
metalc ? metalc2 L FE FE2 . A FE2 401 1_555 D NE2 HIS 266 D HIS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? 
metalc ? metalc3 L FE FE2 . A FE2 401 1_555 IB O3 BCT . D BCT 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? 
metalc ? metalc4 N MG CLA . A CLA 403 1_555 RB O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc5 S MG CLA . B CLA 501 1_555 SB O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc6 BA MG CLA . B CLA 510 1_555 SB O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc7 C OD1 ASN 7 C ASN 27 1_555 YA MG CLA . C CLA 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc8 UA MG CLA . C CLA 507 1_555 TB O HOH . C HOH 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? 
metalc ? metalc9 GB MG CLA . D CLA 401 1_555 UB O HOH . D HOH 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc10 E NE2 HIS 17 E HIS 23 1_555 OB FE HEM . E HEM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc11 OB FE HEM . E HEM 101 1_555 F NE2 HIS 12 F HIS 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? 
#
_chem_comp.formula           'C14 H28 O6' 
_chem_comp.formula_weight    292.369 
_chem_comp.id                BOG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'octyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 BOG sing 171 n n 
C1 C2 BOG sing 172 n n 
C1 O5 BOG sing 173 n n 
C1 H1 BOG sing 174 n n 
O1 C1' BOG sing 175 n n 
C2 O2 BOG sing 176 n n 
C2 C3 BOG sing 177 n n 
C2 H2 BOG sing 178 n n 
O2 HO2 BOG sing 179 n n 
C3 O3 BOG sing 180 n n 
C3 C4 BOG sing 181 n n 
C3 H3 BOG sing 182 n n 
O3 HO3 BOG sing 183 n n 
C4 O4 BOG sing 184 n n 
C4 C5 BOG sing 185 n n 
C4 H4 BOG sing 186 n n 
O4 HO4 BOG sing 187 n n 
C5 O5 BOG sing 188 n n 
C5 C6 BOG sing 189 n n 
C5 H5 BOG sing 190 n n 
C6 O6 BOG sing 191 n n 
C6 H61 BOG sing 192 n n 
C6 H62 BOG sing 193 n n 
O6 HO6 BOG sing 194 n n 
C1' C2' BOG sing 195 n n 
C1' "H1'1" BOG sing 196 n n 
C1' "H1'2" BOG sing 197 n n 
C2' C3' BOG sing 198 n n 
C2' "H2'1" BOG sing 199 n n 
C2' "H2'2" BOG sing 200 n n 
C3' C4' BOG sing 201 n n 
C3' "H3'1" BOG sing 202 n n 
C3' "H3'2" BOG sing 203 n n 
C4' C5' BOG sing 204 n n 
C4' "H4'1" BOG sing 205 n n 
C4' "H4'2" BOG sing 206 n n 
C5' C6' BOG sing 207 n n 
C5' "H5'1" BOG sing 208 n n 
C5' "H5'2" BOG sing 209 n n 
C6' C7' BOG sing 210 n n 
C6' "H6'1" BOG sing 211 n n 
C6' "H6'2" BOG sing 212 n n 
C7' C8' BOG sing 213 n n 
C7' "H7'1" BOG sing 214 n n 
C7' "H7'2" BOG sing 215 n n 
C8' "H8'1" BOG sing 216 n n 
C8' "H8'2" BOG sing 217 n n 
C8' "H8'3" BOG sing 218 n n 
#
_pdbx_chem_comp_identifier.comp_id            BOG 
_pdbx_chem_comp_identifier.identifier         b-octylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     8R2I 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
L 12 FE2 A 1 401 402 FE2 FE2 . 
M 13 CLA A 1 402 405 CLA CLA . 
N 13 CLA A 1 403 407 CLA CLA . 
O 14 PHO A 1 404 408 PHO PHO . 
P 13 CLA A 1 405 410 CLA CLA . 
Q 15 BCR A 1 406 411 BCR BCR . 
R 16 BOG A 1 407 412 BOG BOG . 
S 13 CLA B 1 501 602 CLA CLA . 
T 13 CLA B 1 502 603 CLA CLA . 
U 13 CLA B 1 503 604 CLA CLA . 
V 13 CLA B 1 504 605 CLA CLA . 
W 13 CLA B 1 505 606 CLA CLA . 
X 13 CLA B 1 506 607 CLA CLA . 
Y 13 CLA B 1 507 608 CLA CLA . 
Z 13 CLA B 1 508 609 CLA CLA . 
AA 13 CLA B 1 509 610 CLA CLA . 
BA 13 CLA B 1 510 611 CLA CLA . 
CA 13 CLA B 1 511 612 CLA CLA . 
DA 13 CLA B 1 512 613 CLA CLA . 
EA 13 CLA B 1 513 614 CLA CLA . 
FA 13 CLA B 1 514 615 CLA CLA . 
GA 13 CLA B 1 515 616 CLA CLA . 
HA 13 CLA B 1 516 617 CLA CLA . 
IA 15 BCR B 1 517 619 BCR BCR . 
JA 15 BCR B 1 518 620 BCR BCR . 
KA 17 LMG B 1 519 622 LMG LMG . 
LA 18 LMT B 1 520 623 LMT LMT . 
MA 18 LMT B 1 521 624 LMT LMT . 
NA 19 LHG B 1 522 408 LHG LHG . 
OA 13 CLA C 1 501 501 CLA CLA . 
PA 13 CLA C 1 502 502 CLA CLA . 
QA 13 CLA C 1 503 503 CLA CLA . 
RA 13 CLA C 1 504 504 CLA CLA . 
SA 13 CLA C 1 505 505 CLA CLA . 
TA 13 CLA C 1 506 506 CLA CLA . 
UA 13 CLA C 1 507 507 CLA CLA . 
VA 13 CLA C 1 508 508 CLA CLA . 
WA 13 CLA C 1 509 509 CLA CLA . 
XA 13 CLA C 1 510 510 CLA CLA . 
YA 13 CLA C 1 511 511 CLA CLA . 
ZA 13 CLA C 1 512 512 CLA CLA . 
AB 13 CLA C 1 513 513 CLA CLA . 
BB 15 BCR C 1 514 514 BCR BCR . 
CB 15 BCR C 1 515 515 BCR BCR . 
DB 15 BCR C 1 516 517 BCR BCR . 
EB 20 DGD C 1 517 518 DGD DGD . 
FB 16 BOG C 1 518 519 BOG BOG . 
GB 13 CLA D 1 401 406 CLA CLA . 
HB 14 PHO D 1 402 409 PHO PHO . 
IB 21 BCT D 1 403 401 BCT BCT . 
JB 13 CLA D 1 404 402 CLA CLA . 
KB 13 CLA D 1 405 403 CLA CLA . 
LB 15 BCR D 1 406 404 BCR BCR . 
MB 22 PL9 D 1 407 405 PL9 PL9 . 
NB 16 BOG D 1 408 409 BOG BOG . 
OB 23 HEM E 1 101 101 HEM HEM . 
PB 15 BCR H 1 101 101 BCR BCR . 
QB 17 LMG H 1 102 102 LMG LMG . 
RB 24 HOH A 1 501 6002 HOH HOH . 
SB 24 HOH B 1 601 6002 HOH HOH . 
SB 24 HOH B 2 602 6001 HOH HOH . 
TB 24 HOH C 1 6001 6001 HOH HOH . 
UB 24 HOH D 1 6001 6001 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BOG . . . R 16 172.129 130.786 119.08 1 20 ? C1 BOG 407 A 1 
HETATM 2 O O1 BOG . . . R 16 170.9 130.317 118.753 1 20 ? O1 BOG 407 A 1 
HETATM 3 C C2 BOG . . . R 16 173.056 129.612 119.338 1 20 ? C2 BOG 407 A 1 
HETATM 4 O O2 BOG . . . R 16 172.581 128.883 120.48 1 20 ? O2 BOG 407 A 1 
HETATM 5 C C3 BOG . . . R 16 174.446 130.055 119.589 1 20 ? C3 BOG 407 A 1 
HETATM 6 O O3 BOG . . . R 16 175.301 128.879 119.705 1 20 ? O3 BOG 407 A 1 
HETATM 7 C C4 BOG . . . R 16 174.966 130.937 118.483 1 20 ? C4 BOG 407 A 1 
HETATM 8 O O4 BOG . . . R 16 176.22 131.451 118.864 1 20 ? O4 BOG 407 A 1 
HETATM 9 C C5 BOG . . . R 16 174.019 132.111 118.184 1 20 ? C5 BOG 407 A 1 
HETATM 10 O O5 BOG . . . R 16 172.643 131.673 117.959 1 20 ? O5 BOG 407 A 1 
HETATM 11 C C6 BOG . . . R 16 174.5 132.837 116.95 1 20 ? C6 BOG 407 A 1 
HETATM 12 O O6 BOG . . . R 16 173.395 133.368 116.25 1 20 ? O6 BOG 407 A 1 
HETATM 13 C C1' BOG . . . R 16 169.839 131.292 118.898 1 20 ? C1' BOG 407 A 1 
HETATM 14 C C2' BOG . . . R 16 168.488 130.581 118.976 1 20 ? C2' BOG 407 A 1 
HETATM 15 C C3' BOG . . . R 16 167.398 131.594 119.232 1 20 ? C3' BOG 407 A 1 
HETATM 16 C C4' BOG . . . R 16 166.223 130.898 119.985 1 20 ? C4' BOG 407 A 1 
HETATM 17 C C5' BOG . . . R 16 165.04 131.915 120.194 1 20 ? C5' BOG 407 A 1 
HETATM 18 C C6' BOG . . . R 16 164.295 131.559 121.467 1 20 ? C6' BOG 407 A 1 
HETATM 19 C C7' BOG . . . R 16 162.917 132.217 121.47 1 20 ? C7' BOG 407 A 1 
HETATM 20 C C8' BOG . . . R 16 162.155 131.829 122.79 1 20 ? C8' BOG 407 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           20 
#